RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 CCDC144AA2RUR9 1427 aa4.58□□□□□ -1.68
ATM-203ENST00000452508 ISY1Q9ULR0 285 aaKnown RBP4.58□□□□□ -1.68
ATM-203ENST00000452508 CCDC9Q9Y3X0 531 aaKnown RBP4.58□□□□□ -1.68
ATM-203ENST00000452508 CDK13Q14004 1512 aaKnown RBP4.58□□□□□ -1.68
ATM-203ENST00000452508 TMF1P82094 1093 aa4.58□□□□□ -1.68
ATM-203ENST00000452508 CSB-PGBD3P0DP91 1061 aa4.58□□□□□ -1.68
ATM-203ENST00000452508 RTF1Q92541 710 aaKnown RBP4.58□□□□□ -1.68
ATM-203ENST00000452508 THOC2Q8NI27 1593 aaKnown RBP4.57□□□□□ -1.68
ATM-203ENST00000452508 MYOM3Q5VTT5 1437 aa4.57□□□□□ -1.68
ATM-203ENST00000452508 LMOD3Q0VAK6 560 aa4.57□□□□□ -1.68
ATM-203ENST00000452508 PLB1Q6P1J6 1458 aa4.57□□□□□ -1.68
ATM-203ENST00000452508 KTN1Q86UP2 1357 aaKnown RBP4.57□□□□□ -1.68
ATM-203ENST00000452508 CASKIN1Q8WXD9 1431 aa4.57□□□□□ -1.68
ATM-203ENST00000452508 PDIA4P13667 645 aaKnown RBP4.57□□□□□ -1.68
ATM-203ENST00000452508 G3V3G9 751 aa4.57□□□□□ -1.68
ATM-203ENST00000452508 DCAF8Q5TAQ9 597 aa4.57□□□□□ -1.68
ATM-203ENST00000452508 ATF3P18847 181 aa4.57□□□□□ -1.68
ATM-203ENST00000452508 GRIN2AQ12879 1464 aa4.57□□□□□ -1.68
ATM-203ENST00000452508 PBRM1Q86U86 1689 aa4.57□□□□□ -1.68
ATM-203ENST00000452508 AKNAQ7Z591 1439 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 VGFO15240 615 aaPredicted RBP4.56□□□□□ -1.68
ATM-203ENST00000452508 PKD2Q13563 968 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 ARXQ96QS3 562 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 LRRFIP1Q32MZ4 808 aaKnown RBP4.56□□□□□ -1.68
ATM-203ENST00000452508 KIF3BO15066 747 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 DCAF11Q8TEB1 546 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 PCF11O94913 1555 aaKnown RBP4.56□□□□□ -1.68
ATM-203ENST00000452508 FANCAO15360 1455 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 NUP155O75694 1391 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 GPRASP1Q5JY77 1395 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 MPHOSPH9Q99550 1183 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 CARD11Q9BXL7 1154 aa4.56□□□□□ -1.68
ATM-203ENST00000452508 KIAA0586Q9BVV6 1533 aa4.55□□□□□ -1.68
ATM-203ENST00000452508 FTSJ3Q8IY81 847 aaKnown RBP4.55□□□□□ -1.68
ATM-203ENST00000452508 KRI1Q8N9T8 703 aaKnown RBP4.55□□□□□ -1.68
ATM-203ENST00000452508 PSME1Q06323 249 aa4.55□□□□□ -1.68
ATM-203ENST00000452508 FAM69CQ0P6D2 419 aa4.55□□□□□ -1.68
ATM-203ENST00000452508 FGD6Q6ZV73 1430 aa4.55□□□□□ -1.68
ATM-203ENST00000452508 THEMISQ8N1K5 641 aaPredicted RBP4.54□□□□□ -1.68
ATM-203ENST00000452508 CHAF1AQ13111 956 aaPredicted RBP4.54□□□□□ -1.68
ATM-203ENST00000452508 CCDC34Q96HJ3 373 aa4.54□□□□□ -1.68
ATM-203ENST00000452508 AMOTL1Q8IY63 956 aa4.54□□□□□ -1.68
ATM-203ENST00000452508 GPATCH3Q96I76 525 aa4.54□□□□□ -1.68
ATM-203ENST00000452508 WDR62O43379 1518 aa4.54□□□□□ -1.68
ATM-203ENST00000452508 FAM9BQ8IZU0 186 aa4.54□□□□□ -1.68
ATM-203ENST00000452508 EIF4G3O43432 1585 aaKnown RBP4.54□□□□□ -1.68
ATM-203ENST00000452508 TIAM1Q13009 1591 aa4.54□□□□□ -1.68
ATM-203ENST00000452508 NUTM2DQ5VT03 806 aaPredicted RBP4.54□□□□□ -1.68
ATM-203ENST00000452508 CCDC141Q6ZP82 1450 aa4.54□□□□□ -1.68
ATM-203ENST00000452508 NGDNQ8NEJ9 315 aaKnown RBP4.54□□□□□ -1.68
ATM-203ENST00000452508 SALL2Q9Y467 1007 aaPredicted RBP4.54□□□□□ -1.68
ATM-203ENST00000452508 OS9Q13438 667 aaPredicted RBP4.53□□□□□ -1.68
ATM-203ENST00000452508 DHX57Q6P158 1386 aaKnown RBP4.53□□□□□ -1.68
ATM-203ENST00000452508 MAP7D2Q96T17 732 aa4.53□□□□□ -1.68
ATM-203ENST00000452508 SMC4Q9NTJ3 1288 aa4.53□□□□□ -1.68
ATM-203ENST00000452508 SENP3-EIF4A1A0A087X0R7 540 aa4.53□□□□□ -1.68
ATM-203ENST00000452508 PPP6R1Q9UPN7 881 aa4.53□□□□□ -1.68
ATM-203ENST00000452508 MIER1Q8N108 512 aa4.52□□□□□ -1.69
ATM-203ENST00000452508 LRPPRCP42704 1394 aaKnown RBP4.52□□□□□ -1.69
ATM-203ENST00000452508 TAF3Q5VWG9 929 aa4.52□□□□□ -1.69
ATM-203ENST00000452508 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.52□□□□□ -1.69
ATM-203ENST00000452508 WDHD1O75717 1129 aaPredicted RBP4.52□□□□□ -1.69
ATM-203ENST00000452508 EVC2Q86UK5 1308 aa4.52□□□□□ -1.69
ATM-203ENST00000452508 PAK3O75914 559 aaPredicted RBP4.52□□□□□ -1.69
ATM-203ENST00000452508 EVA1CP58658 441 aa4.52□□□□□ -1.69
ATM-203ENST00000452508 SAFB2Q14151 953 aaKnown RBP eCLIP4.51□□□□□ -1.69
ATM-203ENST00000452508 IPO8O15397 1037 aaKnown RBP4.51□□□□□ -1.69
ATM-203ENST00000452508 ADAMTS12P58397 1594 aa4.51□□□□□ -1.69
ATM-203ENST00000452508 MCCP23508 829 aa4.51□□□□□ -1.69
ATM-203ENST00000452508 BCL11BQ9C0K0 894 aaPredicted RBP4.51□□□□□ -1.69
ATM-203ENST00000452508 GOLGA6L3A6NEY3 463 aa4.51□□□□□ -1.69
ATM-203ENST00000452508 NOL10Q9BSC4 688 aaKnown RBP4.51□□□□□ -1.69
ATM-203ENST00000452508 FAM135AQ9P2D6 1515 aa4.51□□□□□ -1.69
ATM-203ENST00000452508 AFAP1Q8N556 730 aa4.51□□□□□ -1.69
ATM-203ENST00000452508 EIF3DO15371 548 aaKnown RBP eCLIP4.51□□□□□ -1.696e-7■■□□□ 13.5
ATM-203ENST00000452508 IRX6P78412 446 aaPredicted RBP4.51□□□□□ -1.69
ATM-203ENST00000452508 ANKRD30BQ9BXX2 1392 aa4.51□□□□□ -1.69
ATM-203ENST00000452508 CGNL1Q0VF96 1302 aa4.51□□□□□ -1.69
ATM-203ENST00000452508 ARHGEF11O15085 1522 aa4.51□□□□□ -1.69
ATM-203ENST00000452508 HSPA5P11021 654 aaKnown RBP4.5□□□□□ -1.69
ATM-203ENST00000452508 KIF3AQ9Y496 699 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 CNTLNQ9NXG0 1405 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 GOLGA6L1Q8N7Z2 621 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 TRIM34Q9BYJ4 488 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 HTATSF1O43719 755 aaKnown RBP4.5□□□□□ -1.69
ATM-203ENST00000452508 TTC5Q8N0Z6 440 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 WDR7Q9Y4E6 1490 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 MORC1Q86VD1 984 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 STK31Q9BXU1 1019 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 GTF2E1P29083 439 aaPredicted RBP4.5□□□□□ -1.69
ATM-203ENST00000452508 L3MBTL2Q969R5 705 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 C1orf141Q5JVX7 400 aa4.5□□□□□ -1.69
ATM-203ENST00000452508 KIF15Q9NS87 1388 aa4.49□□□□□ -1.69
ATM-203ENST00000452508 ABCA5Q8WWZ7 1642 aa4.49□□□□□ -1.69
ATM-203ENST00000452508 RAPGEF3O95398 923 aa4.49□□□□□ -1.69
ATM-203ENST00000452508 STK26Q9P289 416 aa4.49□□□□□ -1.69
ATM-203ENST00000452508 KIF16BQ96L93 1317 aa4.49□□□□□ -1.69
ATM-203ENST00000452508 CC2D1BQ5T0F9 858 aaKnown RBP4.49□□□□□ -1.69
ATM-203ENST00000452508 HNRNPUQ00839 825 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATM-203ENST00000452508 TROQ12816 1431 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms