RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 FAM50AQ14320 339 aaKnown RBP24.89■■□□□ 1.58
SCAMP4-205ENST00000452128 HSPA2P54652 639 aa24.88■■□□□ 1.57
SCAMP4-205ENST00000452128 CHIC2Q9UKJ5 165 aa24.88■■□□□ 1.57
SCAMP4-205ENST00000452128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.88■■□□□ 1.579e-7■■■□□ 16.5
SCAMP4-205ENST00000452128 ADGRL2O95490 1459 aa24.88■■□□□ 1.57
SCAMP4-205ENST00000452128 FAM135AQ9P2D6 1515 aa24.86■■□□□ 1.57
SCAMP4-205ENST00000452128 ANKRD30AQ9BXX3 1397 aa24.86■■□□□ 1.57
SCAMP4-205ENST00000452128 CLTCQ00610 1675 aaKnown RBP24.85■■□□□ 1.57
SCAMP4-205ENST00000452128 RNF17Q9BXT8 1623 aaKnown RBP24.85■■□□□ 1.57
SCAMP4-205ENST00000452128 MROH1Q8NDA8 1641 aa24.84■■□□□ 1.57
SCAMP4-205ENST00000452128 ERBINQ96RT1 1412 aa24.84■■□□□ 1.57
SCAMP4-205ENST00000452128 WASHC2CQ9Y4E1 1318 aa24.84■■□□□ 1.57
SCAMP4-205ENST00000452128 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.57
SCAMP4-205ENST00000452128 KDM5DQ9BY66 1539 aa24.81■■□□□ 1.56
SCAMP4-205ENST00000452128 UHRF1BP1Q6BDS2 1440 aa24.81■■□□□ 1.56
SCAMP4-205ENST00000452128 FBXO31Q5XUX0 539 aaPredicted RBP24.8■■□□□ 1.56
SCAMP4-205ENST00000452128 PREX1Q8TCU6 1659 aa24.8■■□□□ 1.56
SCAMP4-205ENST00000452128 RRBP1Q9P2E9 1410 aaKnown RBP24.78■■□□□ 1.56
SCAMP4-205ENST00000452128 PZPP20742 1482 aa24.77■■□□□ 1.56
SCAMP4-205ENST00000452128 ABCC3O15438 1527 aa24.77■■□□□ 1.56
SCAMP4-205ENST00000452128 ROCK1Q13464 1354 aa24.76■■□□□ 1.55
SCAMP4-205ENST00000452128 PRDM15P57071 1507 aaPredicted RBP24.72■■□□□ 1.55
SCAMP4-205ENST00000452128 DEPDC5O75140 1603 aa24.71■■□□□ 1.55
SCAMP4-205ENST00000452128 ANKRD50Q9ULJ7 1429 aa24.7■■□□□ 1.55
SCAMP4-205ENST00000452128 VWDEQ8N2E2 1590 aa24.7■■□□□ 1.54
SCAMP4-205ENST00000452128 ARHGAP31Q2M1Z3 1444 aa24.69■■□□□ 1.54
SCAMP4-205ENST00000452128 TNRQ92752 1358 aa24.68■■□□□ 1.54
SCAMP4-205ENST00000452128 LMTK2Q8IWU2 1503 aa24.66■■□□□ 1.54
SCAMP4-205ENST00000452128 ZC3H13Q5T200 1668 aaKnown RBP24.66■■□□□ 1.54
SCAMP4-205ENST00000452128 STRCQ7RTU9 1775 aa24.65■■□□□ 1.54
SCAMP4-205ENST00000452128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.65■■□□□ 1.54
SCAMP4-205ENST00000452128 A2ML1A8K2U0 1454 aa24.64■■□□□ 1.53
SCAMP4-205ENST00000452128 SPATA31D1Q6ZQQ2 1576 aa24.63■■□□□ 1.53
SCAMP4-205ENST00000452128 MYO3AQ8NEV4 1616 aa24.62■■□□□ 1.53
SCAMP4-205ENST00000452128 ITGAEP38570 1179 aa24.62■■□□□ 1.53
SCAMP4-205ENST00000452128 ERVK-7P63135 1459 aa24.62■■□□□ 1.53
SCAMP4-205ENST00000452128 CEP170BQ9Y4F5 1589 aaPredicted RBP24.61■■□□□ 1.53
SCAMP4-205ENST00000452128 ZNF142P52746 1687 aaPredicted RBP24.61■■□□□ 1.53
SCAMP4-205ENST00000452128 KANK1Q14678 1352 aa24.59■■□□□ 1.53
SCAMP4-205ENST00000452128 CEP152O94986 1710 aa24.59■■□□□ 1.53
SCAMP4-205ENST00000452128 NLRP1Q9C000 1473 aa24.58■■□□□ 1.53
SCAMP4-205ENST00000452128 CAMSAP1Q5T5Y3 1602 aa24.58■■□□□ 1.53
SCAMP4-205ENST00000452128 PTPRTO14522 1441 aa24.58■■□□□ 1.53
SCAMP4-205ENST00000452128 PLA2R1Q13018 1463 aa24.58■■□□□ 1.52
SCAMP4-205ENST00000452128 DMRT2Q9Y5R5 561 aa24.57■■□□□ 1.52
SCAMP4-205ENST00000452128 NCKAP5LQ9HCH0 1330 aa24.55■■□□□ 1.52
SCAMP4-205ENST00000452128 PKD2Q13563 968 aa24.53■■□□□ 1.52
SCAMP4-205ENST00000452128 NOS1P29475 1434 aa24.52■■□□□ 1.52
SCAMP4-205ENST00000452128 NAIPQ13075 1403 aa24.52■■□□□ 1.52
SCAMP4-205ENST00000452128 UNC13BO14795 1591 aa24.51■■□□□ 1.51
SCAMP4-205ENST00000452128 THEMISQ8N1K5 641 aaPredicted RBP24.5■■□□□ 1.51
SCAMP4-205ENST00000452128 EFCAB6Q5THR3 1501 aa24.5■■□□□ 1.51
SCAMP4-205ENST00000452128 ILDR1Q86SU0 546 aaPredicted RBP24.48■■□□□ 1.51
SCAMP4-205ENST00000452128 IDI1Q13907 227 aa24.47■■□□□ 1.51
SCAMP4-205ENST00000452128 UGGT1Q9NYU2 1555 aa24.46■■□□□ 1.51
SCAMP4-205ENST00000452128 RPRD2Q5VT52 1461 aaKnown RBP24.45■■□□□ 1.51
SCAMP4-205ENST00000452128 CFAP65Q6ZU64 1925 aaKnown RBP24.45■■□□□ 1.5
SCAMP4-205ENST00000452128 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
SCAMP4-205ENST00000452128 NUP155O75694 1391 aa24.44■■□□□ 1.5
SCAMP4-205ENST00000452128 SYNMO15061 1565 aa24.42■■□□□ 1.5
SCAMP4-205ENST00000452128 TET3O43151 1660 aa24.41■■□□□ 1.5
SCAMP4-205ENST00000452128 ANKLE2Q86XL3 938 aa24.41■■□□□ 1.5
SCAMP4-205ENST00000452128 IQGAP3Q86VI3 1631 aa24.4■■□□□ 1.5
SCAMP4-205ENST00000452128 SLC52A1Q9NWF4 448 aa24.4■■□□□ 1.5
SCAMP4-205ENST00000452128 MED14O60244 1454 aa24.39■■□□□ 1.5
SCAMP4-205ENST00000452128 ARHGAP23Q9P227 1491 aa24.39■■□□□ 1.5
SCAMP4-205ENST00000452128 NEURL4Q96JN8 1562 aa24.39■■□□□ 1.5
SCAMP4-205ENST00000452128 CERKQ8TCT0 537 aa24.38■■□□□ 1.49
SCAMP4-205ENST00000452128 LTBP4Q8N2S1 1624 aa24.36■■□□□ 1.49
SCAMP4-205ENST00000452128 UBR1Q8IWV7 1749 aa24.36■■□□□ 1.49
SCAMP4-205ENST00000452128 LTKP29376 864 aa24.36■■□□□ 1.49
SCAMP4-205ENST00000452128 SLIT1O75093 1534 aa24.35■■□□□ 1.49
SCAMP4-205ENST00000452128 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
SCAMP4-205ENST00000452128 TMEM2Q9UHN6 1383 aa24.33■■□□□ 1.49
SCAMP4-205ENST00000452128 PIK3C2BO00750 1634 aa24.33■■□□□ 1.49
SCAMP4-205ENST00000452128 E9PCH4 1651 aa24.33■■□□□ 1.49
SCAMP4-205ENST00000452128 ZNF335Q9H4Z2 1342 aaPredicted RBP24.31■■□□□ 1.48
SCAMP4-205ENST00000452128 NPHP4O75161 1426 aaPredicted RBP24.3■■□□□ 1.48
SCAMP4-205ENST00000452128 FBXO41Q8TF61 875 aa24.3■■□□□ 1.48
SCAMP4-205ENST00000452128 KDM5AP29375 1690 aaKnown RBP24.3■■□□□ 1.48
SCAMP4-205ENST00000452128 TXNDC2Q86VQ3 553 aa24.28■■□□□ 1.48
SCAMP4-205ENST00000452128 SCAF11Q99590 1463 aaKnown RBP24.26■■□□□ 1.47
SCAMP4-205ENST00000452128 POLR1AO95602 1720 aaPredicted RBP24.26■■□□□ 1.47
SCAMP4-205ENST00000452128 ADGRB3O60242 1522 aa24.25■■□□□ 1.47
SCAMP4-205ENST00000452128 STAG3Q9UJ98 1225 aa24.23■■□□□ 1.47
SCAMP4-205ENST00000452128 ZFYVE9O95405 1425 aa24.22■■□□□ 1.47
SCAMP4-205ENST00000452128 TMEM131LA2VDJ0 1609 aa24.21■■□□□ 1.47
SCAMP4-205ENST00000452128 EID1Q9Y6B2 187 aa24.21■■□□□ 1.47
SCAMP4-205ENST00000452128 TRIM52Q96A61 297 aa24.2■■□□□ 1.46
SCAMP4-205ENST00000452128 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
SCAMP4-205ENST00000452128 IQGAP1P46940 1657 aa24.18■■□□□ 1.46
SCAMP4-205ENST00000452128 IQSEC2Q5JU85 1478 aa24.17■■□□□ 1.46
SCAMP4-205ENST00000452128 SLC4A1APQ9BWU0 796 aaKnown RBP24.16■■□□□ 1.46
SCAMP4-205ENST00000452128 RIMS2Q9UQ26 1411 aa24.14■■□□□ 1.45
SCAMP4-205ENST00000452128 MPHOSPH9Q99550 1183 aa24.13■■□□□ 1.45
SCAMP4-205ENST00000452128 TRPM2O94759 1503 aa24.11■■□□□ 1.45
SCAMP4-205ENST00000452128 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
SCAMP4-205ENST00000452128 PLEKHG1Q9ULL1 1385 aa24.1■■□□□ 1.45
SCAMP4-205ENST00000452128 SPHKAPQ2M3C7 1700 aa24.1■■□□□ 1.45
SCAMP4-205ENST00000452128 CPS1P31327 1500 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms