RNA–Protein interactions for RNA: ENST00000450643.5

RHBDF1-206, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-206ENST00000450643 NAIPQ13075 1403 aa25.61■■□□□ 1.69
RHBDF1-206ENST00000450643 RIMS1Q86UR5 1692 aaKnown RBP25.59■■□□□ 1.69
RHBDF1-206ENST00000450643 DEPDC5O75140 1603 aa25.59■■□□□ 1.69
RHBDF1-206ENST00000450643 MROH1Q8NDA8 1641 aa25.56■■□□□ 1.68
RHBDF1-206ENST00000450643 CLTCQ00610 1675 aaKnown RBP25.56■■□□□ 1.68
RHBDF1-206ENST00000450643 ESF1Q9H501 851 aaKnown RBP25.56■■□□□ 1.68
RHBDF1-206ENST00000450643 CEP152O94986 1710 aa25.54■■□□□ 1.68
RHBDF1-206ENST00000450643 PRDM15P57071 1507 aaPredicted RBP25.54■■□□□ 1.68
RHBDF1-206ENST00000450643 UNC13BO14795 1591 aa25.54■■□□□ 1.68
RHBDF1-206ENST00000450643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.54■■□□□ 1.68
RHBDF1-206ENST00000450643 ZC3H13Q5T200 1668 aaKnown RBP25.52■■□□□ 1.68
RHBDF1-206ENST00000450643 KDM5DQ9BY66 1539 aa25.52■■□□□ 1.68
RHBDF1-206ENST00000450643 KANK1Q14678 1352 aa25.51■■□□□ 1.67
RHBDF1-206ENST00000450643 FAM135AQ9P2D6 1515 aa25.49■■□□□ 1.67
RHBDF1-206ENST00000450643 SETD5Q9C0A6 1442 aa25.49■■□□□ 1.67
RHBDF1-206ENST00000450643 MROH2AA6NES4 1674 aa25.48■■□□□ 1.67
RHBDF1-206ENST00000450643 KDM4FA0A1W2PPD8 638 aa25.47■■□□□ 1.67
RHBDF1-206ENST00000450643 ABCC3O15438 1527 aa25.47■■□□□ 1.67
RHBDF1-206ENST00000450643 CNTLNQ9NXG0 1405 aa25.46■■□□□ 1.67
RHBDF1-206ENST00000450643 WASHC2CQ9Y4E1 1318 aa25.46■■□□□ 1.67
RHBDF1-206ENST00000450643 CAMSAP1Q5T5Y3 1602 aa25.45■■□□□ 1.67
RHBDF1-206ENST00000450643 PLPPR3Q6T4P5 718 aa25.44■■□□□ 1.66
RHBDF1-206ENST00000450643 PPP6R1Q9UPN7 881 aa25.44■■□□□ 1.66
RHBDF1-206ENST00000450643 IQGAP3Q86VI3 1631 aa25.44■■□□□ 1.66
RHBDF1-206ENST00000450643 C3P01024 1663 aa25.43■■□□□ 1.66
RHBDF1-206ENST00000450643 VWDEQ8N2E2 1590 aa25.43■■□□□ 1.66
RHBDF1-206ENST00000450643 RAB3GAP2Q9H2M9 1393 aa25.43■■□□□ 1.66
RHBDF1-206ENST00000450643 TRIM52Q96A61 297 aa25.42■■□□□ 1.66
RHBDF1-206ENST00000450643 NUP155O75694 1391 aa25.41■■□□□ 1.66
RHBDF1-206ENST00000450643 PTPRMP28827 1452 aa25.4■■□□□ 1.66
RHBDF1-206ENST00000450643 TET3O43151 1660 aa25.39■■□□□ 1.66
RHBDF1-206ENST00000450643 CFAP65Q6ZU64 1925 aaKnown RBP25.36■■□□□ 1.65
RHBDF1-206ENST00000450643 LMTK2Q8IWU2 1503 aa25.36■■□□□ 1.65
RHBDF1-206ENST00000450643 PCGF6Q9BYE7 350 aa25.35■■□□□ 1.65
RHBDF1-206ENST00000450643 EFCAB6Q5THR3 1501 aa25.35■■□□□ 1.65
RHBDF1-206ENST00000450643 ZMYM3Q14202 1370 aa25.34■■□□□ 1.65
RHBDF1-206ENST00000450643 CEBPAP49715 358 aaPredicted RBP25.33■■□□□ 1.65
RHBDF1-206ENST00000450643 E9PCH4 1651 aa25.31■■□□□ 1.64
RHBDF1-206ENST00000450643 PZPP20742 1482 aa25.3■■□□□ 1.64
RHBDF1-206ENST00000450643 ACIN1Q9UKV3 1341 aaKnown RBP25.3■■□□□ 1.64
RHBDF1-206ENST00000450643 PREX1Q8TCU6 1659 aa25.29■■□□□ 1.64
RHBDF1-206ENST00000450643 NPATQ14207 1427 aa25.27■■□□□ 1.64
RHBDF1-206ENST00000450643 SLC4A1APQ9BWU0 796 aaKnown RBP25.26■■□□□ 1.63
RHBDF1-206ENST00000450643 ARHGAP31Q2M1Z3 1444 aa25.25■■□□□ 1.63
RHBDF1-206ENST00000450643 ERVK-7P63135 1459 aa25.23■■□□□ 1.63
RHBDF1-206ENST00000450643 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
RHBDF1-206ENST00000450643 RPRD2Q5VT52 1461 aaKnown RBP25.22■■□□□ 1.63
RHBDF1-206ENST00000450643 HRCP23327 699 aa25.22■■□□□ 1.63
RHBDF1-206ENST00000450643 SPHKAPQ2M3C7 1700 aa25.21■■□□□ 1.63
RHBDF1-206ENST00000450643 FBXO31Q5XUX0 539 aaPredicted RBP25.21■■□□□ 1.63
RHBDF1-206ENST00000450643 SPATA31D1Q6ZQQ2 1576 aa25.21■■□□□ 1.63
RHBDF1-206ENST00000450643 MYO3AQ8NEV4 1616 aa25.19■■□□□ 1.62
RHBDF1-206ENST00000450643 PKD2Q13563 968 aa25.19■■□□□ 1.62
RHBDF1-206ENST00000450643 TNRQ92752 1358 aa25.18■■□□□ 1.62
RHBDF1-206ENST00000450643 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
RHBDF1-206ENST00000450643 MPHOSPH9Q99550 1183 aa25.18■■□□□ 1.62
RHBDF1-206ENST00000450643 SYNMO15061 1565 aa25.15■■□□□ 1.62
RHBDF1-206ENST00000450643 UHRF1BP1Q6BDS2 1440 aa25.12■■□□□ 1.61
RHBDF1-206ENST00000450643 FOXD1Q16676 465 aa25.12■■□□□ 1.61
RHBDF1-206ENST00000450643 NOS1P29475 1434 aa25.12■■□□□ 1.61
RHBDF1-206ENST00000450643 ZNF142P52746 1687 aaPredicted RBP25.11■■□□□ 1.61
RHBDF1-206ENST00000450643 CEP170BQ9Y4F5 1589 aaPredicted RBP25.09■■□□□ 1.61
RHBDF1-206ENST00000450643 TRPM2O94759 1503 aa25.08■■□□□ 1.61
RHBDF1-206ENST00000450643 UGGT1Q9NYU2 1555 aa25.08■■□□□ 1.61
RHBDF1-206ENST00000450643 NLRP1Q9C000 1473 aa25.08■■□□□ 1.6
RHBDF1-206ENST00000450643 PIK3C2BO00750 1634 aa25.08■■□□□ 1.6
RHBDF1-206ENST00000450643 CLTCL1P53675 1640 aa25.05■■□□□ 1.6
RHBDF1-206ENST00000450643 PTPRTO14522 1441 aa25.04■■□□□ 1.6
RHBDF1-206ENST00000450643 A2ML1A8K2U0 1454 aa25.04■■□□□ 1.6
RHBDF1-206ENST00000450643 KIF1BO60333 1816 aa25.02■■□□□ 1.6
RHBDF1-206ENST00000450643 UBR1Q8IWV7 1749 aa25.02■■□□□ 1.6
RHBDF1-206ENST00000450643 LMTK3Q96Q04 1460 aa25.02■■□□□ 1.6
RHBDF1-206ENST00000450643 MYO5BQ9ULV0 1848 aa25.01■■□□□ 1.59
RHBDF1-206ENST00000450643 SLC52A1Q9NWF4 448 aa25■■□□□ 1.59
RHBDF1-206ENST00000450643 STAG3Q9UJ98 1225 aa25■■□□□ 1.59
RHBDF1-206ENST00000450643 DHX57Q6P158 1386 aaKnown RBP25■■□□□ 1.59
RHBDF1-206ENST00000450643 PLA2R1Q13018 1463 aa25■■□□□ 1.59
RHBDF1-206ENST00000450643 ADGRB3O60242 1522 aa25■■□□□ 1.59
RHBDF1-206ENST00000450643 CCDC144AA2RUR9 1427 aa24.98■■□□□ 1.59
RHBDF1-206ENST00000450643 IDI1Q13907 227 aa24.98■■□□□ 1.59
RHBDF1-206ENST00000450643 KDM5AP29375 1690 aaKnown RBP24.97■■□□□ 1.59
RHBDF1-206ENST00000450643 CHGAP10645 457 aaKnown RBP24.97■■□□□ 1.59
RHBDF1-206ENST00000450643 TMEM131LA2VDJ0 1609 aa24.94■■□□□ 1.58
RHBDF1-206ENST00000450643 HSPA2P54652 639 aa24.93■■□□□ 1.58
RHBDF1-206ENST00000450643 ANKRD30BQ9BXX2 1392 aa24.93■■□□□ 1.58
RHBDF1-206ENST00000450643 THEMISQ8N1K5 641 aaPredicted RBP24.89■■□□□ 1.58
RHBDF1-206ENST00000450643 POLR1AO95602 1720 aaPredicted RBP24.88■■□□□ 1.57
RHBDF1-206ENST00000450643 ZNF326Q5BKZ1 582 aaKnown RBP24.85■■□□□ 1.57
RHBDF1-206ENST00000450643 SLIT1O75093 1534 aa24.82■■□□□ 1.56
RHBDF1-206ENST00000450643 CCER1Q8TC90 406 aaPredicted RBP24.81■■□□□ 1.56
RHBDF1-206ENST00000450643 TMEM2Q9UHN6 1383 aa24.8■■□□□ 1.56
RHBDF1-206ENST00000450643 STRCQ7RTU9 1775 aa24.8■■□□□ 1.56
RHBDF1-206ENST00000450643 RIMS2Q9UQ26 1411 aa24.79■■□□□ 1.56
RHBDF1-206ENST00000450643 ARHGAP23Q9P227 1491 aa24.79■■□□□ 1.56
RHBDF1-206ENST00000450643 PPLO60437 1756 aa24.78■■□□□ 1.56
RHBDF1-206ENST00000450643 RGL3Q3MIN7 710 aa24.78■■□□□ 1.56
RHBDF1-206ENST00000450643 NEURL4Q96JN8 1562 aa24.78■■□□□ 1.56
RHBDF1-206ENST00000450643 SPATA31E1Q6ZUB1 1445 aa24.78■■□□□ 1.56
RHBDF1-206ENST00000450643 EID1Q9Y6B2 187 aa24.77■■□□□ 1.56
RHBDF1-206ENST00000450643 SCAF11Q99590 1463 aaKnown RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms