RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 CENPQQ7L2Z9 268 aaPredicted RBP17.48■□□□□ 0.39
ITGB4-202ENST00000449880 KCNJ4P48050 445 aa17.47■□□□□ 0.39
ITGB4-202ENST00000449880 TULP1O00294 542 aaPredicted RBP17.47■□□□□ 0.39
ITGB4-202ENST00000449880 PDE4AP27815 886 aa17.47■□□□□ 0.39
ITGB4-202ENST00000449880 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
ITGB4-202ENST00000449880 FAM161AQ3B820 660 aa17.46■□□□□ 0.39
ITGB4-202ENST00000449880 PHF14O94880 888 aa17.46■□□□□ 0.39
ITGB4-202ENST00000449880 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
ITGB4-202ENST00000449880 UACAQ9BZF9 1416 aa17.46■□□□□ 0.39
ITGB4-202ENST00000449880 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
ITGB4-202ENST00000449880 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
ITGB4-202ENST00000449880 TNNT3P45378 269 aaPredicted RBP17.45■□□□□ 0.38
ITGB4-202ENST00000449880 SPRYD3Q8NCJ5 442 aa17.45■□□□□ 0.38
ITGB4-202ENST00000449880 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
ITGB4-202ENST00000449880 CSPP1Q1MSJ5 1256 aa17.45■□□□□ 0.38
ITGB4-202ENST00000449880 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
ITGB4-202ENST00000449880 MLECQ14165 292 aa17.44■□□□□ 0.38
ITGB4-202ENST00000449880 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
ITGB4-202ENST00000449880 TIAM1Q13009 1591 aa17.43■□□□□ 0.38
ITGB4-202ENST00000449880 EIF3AQ14152 1382 aaKnown RBP17.43■□□□□ 0.38
ITGB4-202ENST00000449880 SRPK2P78362 688 aaKnown RBP17.42■□□□□ 0.38
ITGB4-202ENST00000449880 MORC1Q86VD1 984 aa17.42■□□□□ 0.38
ITGB4-202ENST00000449880 ZNF644Q9H582 1327 aaPredicted RBP17.42■□□□□ 0.38
ITGB4-202ENST00000449880 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
ITGB4-202ENST00000449880 NLRP13Q86W25 1043 aa17.41■□□□□ 0.38
ITGB4-202ENST00000449880 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
ITGB4-202ENST00000449880 ABCA10Q8WWZ4 1543 aa17.4■□□□□ 0.38
ITGB4-202ENST00000449880 SAFB2Q14151 953 aaKnown RBP eCLIP17.39■□□□□ 0.38
ITGB4-202ENST00000449880 EHBP1L1Q8N3D4 1523 aa17.39■□□□□ 0.37
ITGB4-202ENST00000449880 NAP1L2Q9ULW6 460 aaPredicted RBP17.38■□□□□ 0.37
ITGB4-202ENST00000449880 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
ITGB4-202ENST00000449880 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
ITGB4-202ENST00000449880 STK26Q9P289 416 aa17.37■□□□□ 0.37
ITGB4-202ENST00000449880 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
ITGB4-202ENST00000449880 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
ITGB4-202ENST00000449880 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.36■□□□□ 0.37
ITGB4-202ENST00000449880 MTERF4Q7Z6M4 381 aaKnown RBP17.36■□□□□ 0.37
ITGB4-202ENST00000449880 MAP7D2Q96T17 732 aa17.36■□□□□ 0.37
ITGB4-202ENST00000449880 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
ITGB4-202ENST00000449880 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
ITGB4-202ENST00000449880 TPM4P67936 248 aa17.35■□□□□ 0.37
ITGB4-202ENST00000449880 ST20-MTHFSA0A0A6YYL1 179 aa17.35■□□□□ 0.37
ITGB4-202ENST00000449880 HDGFL2Q7Z4V5 671 aaPredicted RBP17.34■□□□□ 0.37
ITGB4-202ENST00000449880 WASHC2CQ9Y4E1 1318 aa17.34■□□□□ 0.37
ITGB4-202ENST00000449880 SOX12O15370 315 aa17.34■□□□□ 0.37
ITGB4-202ENST00000449880 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
ITGB4-202ENST00000449880 HECW1Q76N89 1606 aa17.34■□□□□ 0.37
ITGB4-202ENST00000449880 USP47Q96K76 1375 aa17.34■□□□□ 0.37
ITGB4-202ENST00000449880 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.36
ITGB4-202ENST00000449880 CUL7Q14999 1698 aa17.32■□□□□ 0.36
ITGB4-202ENST00000449880 CHMP4AQ9BY43 222 aa17.31■□□□□ 0.36
ITGB4-202ENST00000449880 CENPJQ9HC77 1338 aaPredicted RBP17.3■□□□□ 0.36
ITGB4-202ENST00000449880 GOLGA6L1Q8N7Z2 621 aa17.3■□□□□ 0.36
ITGB4-202ENST00000449880 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
ITGB4-202ENST00000449880 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
ITGB4-202ENST00000449880 ST18O60284 1047 aa17.3■□□□□ 0.36
ITGB4-202ENST00000449880 ITPRIPQ8IWB1 547 aa17.29■□□□□ 0.36
ITGB4-202ENST00000449880 MIA2Q96PC5 1412 aa17.29■□□□□ 0.36
ITGB4-202ENST00000449880 PRKRIP1Q9H875 184 aaPredicted RBP17.28■□□□□ 0.36
ITGB4-202ENST00000449880 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
ITGB4-202ENST00000449880 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
ITGB4-202ENST00000449880 TPM2P07951 284 aa17.28■□□□□ 0.36
ITGB4-202ENST00000449880 PCF11O94913 1555 aaKnown RBP17.27■□□□□ 0.36
ITGB4-202ENST00000449880 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.36
ITGB4-202ENST00000449880 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
ITGB4-202ENST00000449880 OSCARQ8IYS5 282 aa17.27■□□□□ 0.35
ITGB4-202ENST00000449880 FAM43AQ8N2R8 423 aa17.27■□□□□ 0.35
ITGB4-202ENST00000449880 CHMP5Q9NZZ3 219 aa17.26■□□□□ 0.35
ITGB4-202ENST00000449880 NGEFQ8N5V2 710 aa17.26■□□□□ 0.35
ITGB4-202ENST00000449880 AMER1Q5JTC6 1135 aaPredicted RBP17.25■□□□□ 0.35
ITGB4-202ENST00000449880 ARID3AQ99856 593 aa17.25■□□□□ 0.35
ITGB4-202ENST00000449880 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
ITGB4-202ENST00000449880 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
ITGB4-202ENST00000449880 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
ITGB4-202ENST00000449880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.24■□□□□ 0.35
ITGB4-202ENST00000449880 AAMPQ13685 434 aa17.24■□□□□ 0.35
ITGB4-202ENST00000449880 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
ITGB4-202ENST00000449880 PANK3Q9H999 370 aa17.24■□□□□ 0.35
ITGB4-202ENST00000449880 CSB-PGBD3P0DP91 1061 aa17.24■□□□□ 0.35
ITGB4-202ENST00000449880 DDX49Q9Y6V7 483 aaKnown RBP17.23■□□□□ 0.35
ITGB4-202ENST00000449880 ARHGAP5Q13017 1502 aa17.23■□□□□ 0.35
ITGB4-202ENST00000449880 MRE11P49959 708 aa17.22■□□□□ 0.35
ITGB4-202ENST00000449880 IQGAP2Q13576 1575 aa17.22■□□□□ 0.35
ITGB4-202ENST00000449880 TROQ12816 1431 aaPredicted RBP17.22■□□□□ 0.35
ITGB4-202ENST00000449880 EXOC6Q8TAG9 804 aa17.22■□□□□ 0.35
ITGB4-202ENST00000449880 KIAA0586Q9BVV6 1533 aa17.22■□□□□ 0.35
ITGB4-202ENST00000449880 HMMRO75330 724 aa17.22■□□□□ 0.35
ITGB4-202ENST00000449880 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
ITGB4-202ENST00000449880 CCDC7Q96M83 1385 aa17.21■□□□□ 0.35
ITGB4-202ENST00000449880 MAP3K1Q13233 1512 aa17.21■□□□□ 0.35
ITGB4-202ENST00000449880 GNL2Q13823 731 aaKnown RBP17.21■□□□□ 0.35
ITGB4-202ENST00000449880 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.34
ITGB4-202ENST00000449880 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.34
ITGB4-202ENST00000449880 NFKBIBQ15653 356 aa17.21■□□□□ 0.34
ITGB4-202ENST00000449880 PKNOX2Q96KN3 472 aa17.21■□□□□ 0.34
ITGB4-202ENST00000449880 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.34
ITGB4-202ENST00000449880 CLSTN1O94985 981 aa17.2■□□□□ 0.34
ITGB4-202ENST00000449880 SETQ01105 290 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-202ENST00000449880 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
ITGB4-202ENST00000449880 ATP6V1DQ9Y5K8 247 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms