RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 DUOX2Q9NRD8 1548 aa23.93■■□□□ 1.42
TOP3B-211ENST00000449704 WASHC2CQ9Y4E1 1318 aa23.9■■□□□ 1.42
TOP3B-211ENST00000449704 ZMYM3Q14202 1370 aa23.9■■□□□ 1.42
TOP3B-211ENST00000449704 ADGRL2O95490 1459 aa23.88■■□□□ 1.41
TOP3B-211ENST00000449704 ERBINQ96RT1 1412 aa23.87■■□□□ 1.41
TOP3B-211ENST00000449704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.413e-6■■■□□ 14.6
TOP3B-211ENST00000449704 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
TOP3B-211ENST00000449704 ANKRD50Q9ULJ7 1429 aa23.82■■□□□ 1.4
TOP3B-211ENST00000449704 EIF2AK4Q9P2K8 1649 aaKnown RBP23.8■■□□□ 1.4
TOP3B-211ENST00000449704 CLTCQ00610 1675 aaKnown RBP23.79■■□□□ 1.4
TOP3B-211ENST00000449704 KDM5DQ9BY66 1539 aa23.79■■□□□ 1.4
TOP3B-211ENST00000449704 RNF17Q9BXT8 1623 aaKnown RBP23.77■■□□□ 1.4
TOP3B-211ENST00000449704 FBXO41Q8TF61 875 aa23.77■■□□□ 1.4
TOP3B-211ENST00000449704 KANK1Q14678 1352 aa23.77■■□□□ 1.4
TOP3B-211ENST00000449704 C3P01024 1663 aa23.76■■□□□ 1.39
TOP3B-211ENST00000449704 FBXO31Q5XUX0 539 aaPredicted RBP23.75■■□□□ 1.39
TOP3B-211ENST00000449704 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
TOP3B-211ENST00000449704 MROH2AA6NES4 1674 aa23.74■■□□□ 1.39
TOP3B-211ENST00000449704 HSPA2P54652 639 aa23.74■■□□□ 1.39
TOP3B-211ENST00000449704 NPATQ14207 1427 aa23.73■■□□□ 1.39
TOP3B-211ENST00000449704 LMTK3Q96Q04 1460 aa23.73■■□□□ 1.39
TOP3B-211ENST00000449704 ABCC3O15438 1527 aa23.73■■□□□ 1.39
TOP3B-211ENST00000449704 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
TOP3B-211ENST00000449704 MROH1Q8NDA8 1641 aa23.72■■□□□ 1.39
TOP3B-211ENST00000449704 PRDM15P57071 1507 aaPredicted RBP23.69■■□□□ 1.38
TOP3B-211ENST00000449704 PZPP20742 1482 aa23.68■■□□□ 1.38
TOP3B-211ENST00000449704 TNRQ92752 1358 aa23.66■■□□□ 1.38
TOP3B-211ENST00000449704 SETD1BQ9UPS6 1966 aaKnown RBP23.65■■□□□ 1.38
TOP3B-211ENST00000449704 DEPDC5O75140 1603 aa23.64■■□□□ 1.38
TOP3B-211ENST00000449704 NAIPQ13075 1403 aa23.64■■□□□ 1.37
TOP3B-211ENST00000449704 ZC3H13Q5T200 1668 aaKnown RBP23.63■■□□□ 1.37
TOP3B-211ENST00000449704 PREX1Q8TCU6 1659 aa23.62■■□□□ 1.37
TOP3B-211ENST00000449704 NUP155O75694 1391 aa23.62■■□□□ 1.37
TOP3B-211ENST00000449704 HFM1A2PYH4 1435 aa23.6■■□□□ 1.37
TOP3B-211ENST00000449704 ARHGAP31Q2M1Z3 1444 aa23.6■■□□□ 1.37
TOP3B-211ENST00000449704 CEP152O94986 1710 aa23.6■■□□□ 1.37
TOP3B-211ENST00000449704 VWDEQ8N2E2 1590 aa23.6■■□□□ 1.37
TOP3B-211ENST00000449704 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
TOP3B-211ENST00000449704 CAMSAP1Q5T5Y3 1602 aa23.58■■□□□ 1.36
TOP3B-211ENST00000449704 ERVK-7P63135 1459 aa23.57■■□□□ 1.36
TOP3B-211ENST00000449704 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
TOP3B-211ENST00000449704 UNC13BO14795 1591 aa23.54■■□□□ 1.36
TOP3B-211ENST00000449704 A2ML1A8K2U0 1454 aa23.53■■□□□ 1.36
TOP3B-211ENST00000449704 MYO3AQ8NEV4 1616 aa23.52■■□□□ 1.36
TOP3B-211ENST00000449704 SPATA31D1Q6ZQQ2 1576 aa23.52■■□□□ 1.36
TOP3B-211ENST00000449704 NLRP1Q9C000 1473 aa23.51■■□□□ 1.35
TOP3B-211ENST00000449704 EFCAB6Q5THR3 1501 aa23.5■■□□□ 1.35
TOP3B-211ENST00000449704 CEP170BQ9Y4F5 1589 aaPredicted RBP23.5■■□□□ 1.35
TOP3B-211ENST00000449704 THEMISQ8N1K5 641 aaPredicted RBP23.49■■□□□ 1.35
TOP3B-211ENST00000449704 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
TOP3B-211ENST00000449704 CFAP65Q6ZU64 1925 aaKnown RBP23.47■■□□□ 1.35
TOP3B-211ENST00000449704 IDI1Q13907 227 aa23.46■■□□□ 1.35
TOP3B-211ENST00000449704 RPRD2Q5VT52 1461 aaKnown RBP23.46■■□□□ 1.35
TOP3B-211ENST00000449704 NCKAP5LQ9HCH0 1330 aa23.46■■□□□ 1.35
TOP3B-211ENST00000449704 STAG3Q9UJ98 1225 aa23.46■■□□□ 1.35
TOP3B-211ENST00000449704 IQGAP3Q86VI3 1631 aa23.45■■□□□ 1.34
TOP3B-211ENST00000449704 DMRT2Q9Y5R5 561 aa23.45■■□□□ 1.34
TOP3B-211ENST00000449704 TET3O43151 1660 aa23.44■■□□□ 1.34
TOP3B-211ENST00000449704 NOS1P29475 1434 aa23.44■■□□□ 1.34
TOP3B-211ENST00000449704 SETD5Q9C0A6 1442 aa23.44■■□□□ 1.34
TOP3B-211ENST00000449704 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
TOP3B-211ENST00000449704 SLC52A1Q9NWF4 448 aa23.43■■□□□ 1.34
TOP3B-211ENST00000449704 ZNF142P52746 1687 aaPredicted RBP23.43■■□□□ 1.34
TOP3B-211ENST00000449704 UGGT1Q9NYU2 1555 aa23.43■■□□□ 1.34
TOP3B-211ENST00000449704 PKD2Q13563 968 aa23.42■■□□□ 1.34
TOP3B-211ENST00000449704 ANKLE2Q86XL3 938 aa23.4■■□□□ 1.34
TOP3B-211ENST00000449704 PLA2R1Q13018 1463 aa23.39■■□□□ 1.34
TOP3B-211ENST00000449704 SYNMO15061 1565 aa23.37■■□□□ 1.33
TOP3B-211ENST00000449704 RAB3GAP2Q9H2M9 1393 aa23.37■■□□□ 1.33
TOP3B-211ENST00000449704 CHGAP10645 457 aaKnown RBP23.36■■□□□ 1.33
TOP3B-211ENST00000449704 E9PCH4 1651 aa23.35■■□□□ 1.33
TOP3B-211ENST00000449704 STRCQ7RTU9 1775 aa23.35■■□□□ 1.33
TOP3B-211ENST00000449704 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
TOP3B-211ENST00000449704 MPHOSPH9Q99550 1183 aa23.34■■□□□ 1.33
TOP3B-211ENST00000449704 PTPRTO14522 1441 aa23.33■■□□□ 1.33
TOP3B-211ENST00000449704 FOXD1Q16676 465 aa23.32■■□□□ 1.32
TOP3B-211ENST00000449704 TXNDC2Q86VQ3 553 aa23.32■■□□□ 1.32
TOP3B-211ENST00000449704 EID1Q9Y6B2 187 aa23.31■■□□□ 1.32
TOP3B-211ENST00000449704 PIK3C2BO00750 1634 aa23.3■■□□□ 1.32
TOP3B-211ENST00000449704 TMEM2Q9UHN6 1383 aa23.29■■□□□ 1.32
TOP3B-211ENST00000449704 LTKP29376 864 aa23.29■■□□□ 1.32
TOP3B-211ENST00000449704 UBR1Q8IWV7 1749 aa23.28■■□□□ 1.32
TOP3B-211ENST00000449704 ADGRB3O60242 1522 aa23.25■■□□□ 1.31
TOP3B-211ENST00000449704 HRCP23327 699 aa23.25■■□□□ 1.31
TOP3B-211ENST00000449704 NPHP4O75161 1426 aaPredicted RBP23.25■■□□□ 1.31
TOP3B-211ENST00000449704 ARHGAP23Q9P227 1491 aa23.24■■□□□ 1.31
TOP3B-211ENST00000449704 SCAF11Q99590 1463 aaKnown RBP23.24■■□□□ 1.31
TOP3B-211ENST00000449704 SLIT1O75093 1534 aa23.23■■□□□ 1.31
TOP3B-211ENST00000449704 CERKQ8TCT0 537 aa23.23■■□□□ 1.31
TOP3B-211ENST00000449704 HDGFP51858 240 aaKnown RBP23.22■■□□□ 1.31
TOP3B-211ENST00000449704 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
TOP3B-211ENST00000449704 PPP1R15AO75807 674 aaPredicted RBP23.21■■□□□ 1.31
TOP3B-211ENST00000449704 ZNF326Q5BKZ1 582 aaKnown RBP23.21■■□□□ 1.31
TOP3B-211ENST00000449704 NEURL4Q96JN8 1562 aa23.2■■□□□ 1.3
TOP3B-211ENST00000449704 MED14O60244 1454 aa23.19■■□□□ 1.3
TOP3B-211ENST00000449704 RIMS2Q9UQ26 1411 aa23.19■■□□□ 1.3
TOP3B-211ENST00000449704 ZNF335Q9H4Z2 1342 aaPredicted RBP23.19■■□□□ 1.3
TOP3B-211ENST00000449704 NUTM2DQ5VT03 806 aaPredicted RBP23.19■■□□□ 1.3
TOP3B-211ENST00000449704 BCANQ96GW7 911 aa23.19■■□□□ 1.3
TOP3B-211ENST00000449704 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms