RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 TNRQ92752 1358 aa38.19■■■■□ 3.7
NUP50-211ENST00000445721 PIP4K2BP78356 416 aa38.18■■■■□ 3.7
NUP50-211ENST00000445721 HSPA1LP34931 641 aa38.16■■■■□ 3.7
NUP50-211ENST00000445721 EHBP1L1Q8N3D4 1523 aa38.15■■■■□ 3.7
NUP50-211ENST00000445721 TOM1O60784 492 aa38.13■■■■□ 3.69
NUP50-211ENST00000445721 CEP162Q5TB80 1403 aa38.12■■■■□ 3.69
NUP50-211ENST00000445721 WASHC2CQ9Y4E1 1318 aa38.12■■■■□ 3.69
NUP50-211ENST00000445721 ANKLE2Q86XL3 938 aa38.1■■■■□ 3.69
NUP50-211ENST00000445721 PZPP20742 1482 aa38.09■■■■□ 3.69
NUP50-211ENST00000445721 SHANK2Q9UPX8 1470 aa38.09■■■■□ 3.69
NUP50-211ENST00000445721 CPS1P31327 1500 aa38.08■■■■□ 3.69
NUP50-211ENST00000445721 POLR1AO95602 1720 aaPredicted RBP38.08■■■■□ 3.69
NUP50-211ENST00000445721 NEURL4Q96JN8 1562 aa38.08■■■■□ 3.69
NUP50-211ENST00000445721 CCDC141Q6ZP82 1450 aa38.07■■■■□ 3.68
NUP50-211ENST00000445721 KDM5DQ9BY66 1539 aa38.07■■■■□ 3.68
NUP50-211ENST00000445721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.06■■■■□ 3.68
NUP50-211ENST00000445721 THEMISQ8N1K5 641 aaPredicted RBP38.06■■■■□ 3.68
NUP50-211ENST00000445721 RSPH4AQ5TD94 716 aa38.03■■■■□ 3.68
NUP50-211ENST00000445721 MIA2Q96PC5 1412 aa38.02■■■■□ 3.68
NUP50-211ENST00000445721 FAM135AQ9P2D6 1515 aa38.01■■■■□ 3.67
NUP50-211ENST00000445721 CAMSAP2Q08AD1 1489 aa38■■■■□ 3.67
NUP50-211ENST00000445721 NCOA2Q15596 1464 aa37.97■■■■□ 3.67
NUP50-211ENST00000445721 MED1Q15648 1581 aaPredicted RBP37.97■■■■□ 3.67
NUP50-211ENST00000445721 NLRP1Q9C000 1473 aa37.96■■■■□ 3.67
NUP50-211ENST00000445721 NPHP4O75161 1426 aaPredicted RBP37.95■■■■□ 3.67
NUP50-211ENST00000445721 TSPY4P0CV99 314 aa37.94■■■■□ 3.66
NUP50-211ENST00000445721 TSPY10P0CW01 314 aa37.94■■■■□ 3.66
NUP50-211ENST00000445721 VWDEQ8N2E2 1590 aa37.93■■■■□ 3.66
NUP50-211ENST00000445721 UGGT1Q9NYU2 1555 aa37.93■■■■□ 3.66
NUP50-211ENST00000445721 MED14O60244 1454 aa37.9■■■■□ 3.66
NUP50-211ENST00000445721 DEPDC5O75140 1603 aa37.86■■■■□ 3.65
NUP50-211ENST00000445721 ARHGEF5Q12774 1597 aa37.83■■■■□ 3.65
NUP50-211ENST00000445721 PHF23Q9BUL5 403 aaPredicted RBP37.82■■■■□ 3.64
NUP50-211ENST00000445721 SENP3Q9H4L4 574 aaPredicted RBP37.8■■■■□ 3.64
NUP50-211ENST00000445721 ALKQ9UM73 1620 aa37.79■■■■□ 3.64
NUP50-211ENST00000445721 IQGAP1P46940 1657 aa37.78■■■■□ 3.64
NUP50-211ENST00000445721 ABCC3O15438 1527 aa37.76■■■■□ 3.63
NUP50-211ENST00000445721 RNF17Q9BXT8 1623 aaKnown RBP37.72■■■■□ 3.63
NUP50-211ENST00000445721 LRRC7Q96NW7 1537 aa37.72■■■■□ 3.63
NUP50-211ENST00000445721 ERVK-7P63135 1459 aa37.71■■■■□ 3.63
NUP50-211ENST00000445721 STRCP1A6NGW2 1772 aa37.7■■■■□ 3.63
NUP50-211ENST00000445721 ZC3H13Q5T200 1668 aaKnown RBP37.66■■■■□ 3.62
NUP50-211ENST00000445721 MAST1Q9Y2H9 1570 aa37.64■■■■□ 3.62
NUP50-211ENST00000445721 LRRC9Q6ZRR7 1453 aa37.63■■■■□ 3.61
NUP50-211ENST00000445721 CFAP65Q6ZU64 1925 aaKnown RBP37.63■■■■□ 3.61
NUP50-211ENST00000445721 EIF2AK4Q9P2K8 1649 aaKnown RBP37.61■■■■□ 3.61
NUP50-211ENST00000445721 SYNMO15061 1565 aa37.59■■■■□ 3.61
NUP50-211ENST00000445721 SCAF11Q99590 1463 aaKnown RBP37.58■■■■□ 3.61
NUP50-211ENST00000445721 MROH1Q8NDA8 1641 aa37.58■■■■□ 3.61
NUP50-211ENST00000445721 LTKP29376 864 aa37.58■■■■□ 3.61
NUP50-211ENST00000445721 TXNDC2Q86VQ3 553 aa37.58■■■■□ 3.61
NUP50-211ENST00000445721 UBR1Q8IWV7 1749 aa37.56■■■■□ 3.6
NUP50-211ENST00000445721 CEP152O94986 1710 aa37.56■■■■□ 3.6
NUP50-211ENST00000445721 KANK4Q5T7N3 995 aaPredicted RBP37.54■■■■□ 3.6
NUP50-211ENST00000445721 VPS8Q8N3P4 1428 aa37.51■■■■□ 3.59
NUP50-211ENST00000445721 EID1Q9Y6B2 187 aa37.5■■■■□ 3.59
NUP50-211ENST00000445721 DUOX2Q9NRD8 1548 aa37.5■■■■□ 3.59
NUP50-211ENST00000445721 MYOM3Q5VTT5 1437 aa37.49■■■■□ 3.59
NUP50-211ENST00000445721 ARHGAP23Q9P227 1491 aa37.48■■■■□ 3.59
NUP50-211ENST00000445721 SLIT1O75093 1534 aa37.46■■■■□ 3.59
NUP50-211ENST00000445721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.44■■■■□ 3.58
NUP50-211ENST00000445721 ARHGAP31Q2M1Z3 1444 aa37.44■■■■□ 3.58
NUP50-211ENST00000445721 KIF15Q9NS87 1388 aa37.43■■■■□ 3.58
NUP50-211ENST00000445721 RRP7BPQ9NSQ0 103 aa37.43■■■■□ 3.58
NUP50-211ENST00000445721 RGS17Q9UGC6 210 aaPredicted RBP37.42■■■■□ 3.58
NUP50-211ENST00000445721 STAG3Q9UJ98 1225 aa37.41■■■■□ 3.58
NUP50-211ENST00000445721 PRDM15P57071 1507 aaPredicted RBP37.37■■■■□ 3.57
NUP50-211ENST00000445721 TMEM2Q9UHN6 1383 aa37.37■■■■□ 3.57
NUP50-211ENST00000445721 XIRP1Q702N8 1843 aaKnown RBP37.36■■■■□ 3.57
NUP50-211ENST00000445721 LOC105371045A0A1W2PR82 267 aa37.36■■■■□ 3.57
NUP50-211ENST00000445721 MAP3K1Q13233 1512 aa37.36■■■■□ 3.57
NUP50-211ENST00000445721 ERBINQ96RT1 1412 aa37.35■■■■□ 3.57
NUP50-211ENST00000445721 ABCC5O15440 1437 aa37.33■■■■□ 3.57
NUP50-211ENST00000445721 PIK3C2BO00750 1634 aa37.32■■■■□ 3.57
NUP50-211ENST00000445721 FAM135BQ49AJ0 1406 aa37.32■■■■□ 3.56
NUP50-211ENST00000445721 KANK1Q14678 1352 aa37.3■■■■□ 3.56
NUP50-211ENST00000445721 TMEM94Q12767 1356 aa37.29■■■■□ 3.56
NUP50-211ENST00000445721 IDI1Q13907 227 aa37.28■■■■□ 3.56
NUP50-211ENST00000445721 KCNA6P17658 529 aa37.27■■■■□ 3.56
NUP50-211ENST00000445721 PROSER2Q86WR7 435 aaPredicted RBP37.26■■■■□ 3.56
NUP50-211ENST00000445721 SLC26A8Q96RN1 970 aa37.26■■■■□ 3.56
NUP50-211ENST00000445721 RBM33Q96EV2 1170 aaKnown RBP37.24■■■■□ 3.55
NUP50-211ENST00000445721 EFCAB6Q5THR3 1501 aa37.23■■■■□ 3.55
NUP50-211ENST00000445721 CROCC2H7BZ55 1655 aa37.22■■■■□ 3.55
NUP50-211ENST00000445721 POTEAQ6S8J7 498 aa37.2■■■■□ 3.55
NUP50-211ENST00000445721 PTPN23Q9H3S7 1636 aa37.2■■■■□ 3.55
NUP50-211ENST00000445721 DAPK1P53355 1430 aa37.19■■■■□ 3.54
NUP50-211ENST00000445721 CHIC2Q9UKJ5 165 aa37.19■■■■□ 3.54
NUP50-211ENST00000445721 TET3O43151 1660 aa37.15■■■■□ 3.54
NUP50-211ENST00000445721 KDM5AP29375 1690 aaKnown RBP37.15■■■■□ 3.54
NUP50-211ENST00000445721 APLP2Q06481 763 aa37.14■■■■□ 3.54
NUP50-211ENST00000445721 BCANQ96GW7 911 aa37.14■■■■□ 3.54
NUP50-211ENST00000445721 LMTK2Q8IWU2 1503 aa37.14■■■■□ 3.54
NUP50-211ENST00000445721 ANKRD30AQ9BXX3 1397 aa37.14■■■■□ 3.54
NUP50-211ENST00000445721 ROBO1Q9Y6N7 1651 aa37.13■■■■□ 3.53
NUP50-211ENST00000445721 NOS1P29475 1434 aa37.09■■■■□ 3.53
NUP50-211ENST00000445721 FGD6Q6ZV73 1430 aa37.08■■■■□ 3.53
NUP50-211ENST00000445721 SLC52A1Q9NWF4 448 aa37.07■■■■□ 3.52
NUP50-211ENST00000445721 MSH6P52701 1360 aa37.05■■■■□ 3.52
NUP50-211ENST00000445721 NKTRP30414 1462 aaKnown RBP37.05■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms