RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 RTEL1-TNFRSF6BF6WH68 1400 aa24.08■■□□□ 1.44
UBE2F-216ENST00000445676 DHX29Q7Z478 1369 aaKnown RBP24.06■■□□□ 1.44
UBE2F-216ENST00000445676 KDM5DQ9BY66 1539 aa24.06■■□□□ 1.44
UBE2F-216ENST00000445676 PZPP20742 1482 aa24.06■■□□□ 1.44
UBE2F-216ENST00000445676 TNRQ92752 1358 aa24.05■■□□□ 1.44
UBE2F-216ENST00000445676 HSPA1LP34931 641 aa24.05■■□□□ 1.44
UBE2F-216ENST00000445676 SHANK2Q9UPX8 1470 aa24.05■■□□□ 1.44
UBE2F-216ENST00000445676 FAM135AQ9P2D6 1515 aa24.05■■□□□ 1.44
UBE2F-216ENST00000445676 VWDEQ8N2E2 1590 aa24.03■■□□□ 1.44
UBE2F-216ENST00000445676 FBXO31Q5XUX0 539 aaPredicted RBP24.03■■□□□ 1.44
UBE2F-216ENST00000445676 SCAF1Q9H7N4 1312 aaKnown RBP24.03■■□□□ 1.44
UBE2F-216ENST00000445676 ALKQ9UM73 1620 aa24.02■■□□□ 1.44
UBE2F-216ENST00000445676 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
UBE2F-216ENST00000445676 PIP4K2BP78356 416 aa24.01■■□□□ 1.43
UBE2F-216ENST00000445676 CCDC141Q6ZP82 1450 aa24■■□□□ 1.43
UBE2F-216ENST00000445676 DEPDC5O75140 1603 aa23.99■■□□□ 1.43
UBE2F-216ENST00000445676 KIF3BO15066 747 aa23.98■■□□□ 1.43
UBE2F-216ENST00000445676 TOM1O60784 492 aa23.97■■□□□ 1.43
UBE2F-216ENST00000445676 CAMSAP2Q08AD1 1489 aa23.97■■□□□ 1.43
UBE2F-216ENST00000445676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.97■■□□□ 1.43
UBE2F-216ENST00000445676 STRCP1A6NGW2 1772 aa23.96■■□□□ 1.43
UBE2F-216ENST00000445676 UGGT1Q9NYU2 1555 aa23.95■■□□□ 1.43
UBE2F-216ENST00000445676 MED14O60244 1454 aa23.95■■□□□ 1.42
UBE2F-216ENST00000445676 NLRP1Q9C000 1473 aa23.95■■□□□ 1.42
UBE2F-216ENST00000445676 IQGAP1P46940 1657 aa23.95■■□□□ 1.42
UBE2F-216ENST00000445676 MIA2Q96PC5 1412 aa23.93■■□□□ 1.42
UBE2F-216ENST00000445676 NPHP4O75161 1426 aaPredicted RBP23.93■■□□□ 1.42
UBE2F-216ENST00000445676 ANKLE2Q86XL3 938 aa23.92■■□□□ 1.42
UBE2F-216ENST00000445676 WASHC2CQ9Y4E1 1318 aa23.91■■□□□ 1.42
UBE2F-216ENST00000445676 NCOA2Q15596 1464 aa23.91■■□□□ 1.42
UBE2F-216ENST00000445676 RNF17Q9BXT8 1623 aaKnown RBP23.9■■□□□ 1.42
UBE2F-216ENST00000445676 ARHGEF5Q12774 1597 aa23.9■■□□□ 1.42
UBE2F-216ENST00000445676 THEMISQ8N1K5 641 aaPredicted RBP23.88■■□□□ 1.41
UBE2F-216ENST00000445676 ZC3H13Q5T200 1668 aaKnown RBP23.88■■□□□ 1.41
UBE2F-216ENST00000445676 SYNMO15061 1565 aa23.86■■□□□ 1.41
UBE2F-216ENST00000445676 CFAP65Q6ZU64 1925 aaKnown RBP23.86■■□□□ 1.41
UBE2F-216ENST00000445676 ABCC3O15438 1527 aa23.85■■□□□ 1.41
UBE2F-216ENST00000445676 LRRC7Q96NW7 1537 aa23.84■■□□□ 1.41
UBE2F-216ENST00000445676 RSPH4AQ5TD94 716 aa23.83■■□□□ 1.41
UBE2F-216ENST00000445676 CEP152O94986 1710 aa23.82■■□□□ 1.4
UBE2F-216ENST00000445676 UBR1Q8IWV7 1749 aa23.81■■□□□ 1.4
UBE2F-216ENST00000445676 MROH1Q8NDA8 1641 aa23.81■■□□□ 1.4
UBE2F-216ENST00000445676 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
UBE2F-216ENST00000445676 MAST1Q9Y2H9 1570 aa23.81■■□□□ 1.4
UBE2F-216ENST00000445676 ERVK-7P63135 1459 aa23.81■■□□□ 1.4
UBE2F-216ENST00000445676 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
UBE2F-216ENST00000445676 XIRP1Q702N8 1843 aaKnown RBP23.78■■□□□ 1.4
UBE2F-216ENST00000445676 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
UBE2F-216ENST00000445676 TSPY4P0CV99 314 aa23.74■■□□□ 1.39
UBE2F-216ENST00000445676 TSPY10P0CW01 314 aa23.74■■□□□ 1.39
UBE2F-216ENST00000445676 SCAF11Q99590 1463 aaKnown RBP23.72■■□□□ 1.39
UBE2F-216ENST00000445676 ARHGAP23Q9P227 1491 aa23.69■■□□□ 1.38
UBE2F-216ENST00000445676 SLIT1O75093 1534 aa23.69■■□□□ 1.38
UBE2F-216ENST00000445676 LRRC9Q6ZRR7 1453 aa23.68■■□□□ 1.38
UBE2F-216ENST00000445676 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.38
UBE2F-216ENST00000445676 DUOX2Q9NRD8 1548 aa23.64■■□□□ 1.38
UBE2F-216ENST00000445676 LTKP29376 864 aa23.64■■□□□ 1.37
UBE2F-216ENST00000445676 RGS17Q9UGC6 210 aaPredicted RBP23.63■■□□□ 1.37
UBE2F-216ENST00000445676 PIK3C2BO00750 1634 aa23.62■■□□□ 1.37
UBE2F-216ENST00000445676 CROCC2H7BZ55 1655 aa23.61■■□□□ 1.37
UBE2F-216ENST00000445676 ARHGAP31Q2M1Z3 1444 aa23.6■■□□□ 1.37
UBE2F-216ENST00000445676 TXNDC2Q86VQ3 553 aa23.58■■□□□ 1.37
UBE2F-216ENST00000445676 MYOM3Q5VTT5 1437 aa23.58■■□□□ 1.36
UBE2F-216ENST00000445676 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.36
UBE2F-216ENST00000445676 KDM5AP29375 1690 aaKnown RBP23.55■■□□□ 1.36
UBE2F-216ENST00000445676 ROBO1Q9Y6N7 1651 aa23.54■■□□□ 1.36
UBE2F-216ENST00000445676 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
UBE2F-216ENST00000445676 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
UBE2F-216ENST00000445676 ERBINQ96RT1 1412 aa23.53■■□□□ 1.36
UBE2F-216ENST00000445676 KANK4Q5T7N3 995 aaPredicted RBP23.53■■□□□ 1.36
UBE2F-216ENST00000445676 MAP3K1Q13233 1512 aa23.53■■□□□ 1.36
UBE2F-216ENST00000445676 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
UBE2F-216ENST00000445676 EID1Q9Y6B2 187 aa23.51■■□□□ 1.35
UBE2F-216ENST00000445676 EFCAB6Q5THR3 1501 aa23.5■■□□□ 1.35
UBE2F-216ENST00000445676 TMEM94Q12767 1356 aa23.5■■□□□ 1.35
UBE2F-216ENST00000445676 TET3O43151 1660 aa23.48■■□□□ 1.35
UBE2F-216ENST00000445676 ABCC5O15440 1437 aa23.48■■□□□ 1.35
UBE2F-216ENST00000445676 PTPN23Q9H3S7 1636 aa23.48■■□□□ 1.35
UBE2F-216ENST00000445676 NWD1Q149M9 1564 aa23.47■■□□□ 1.35
UBE2F-216ENST00000445676 POTEAQ6S8J7 498 aa23.46■■□□□ 1.35
UBE2F-216ENST00000445676 SETD1AO15047 1707 aaKnown RBP23.45■■□□□ 1.34
UBE2F-216ENST00000445676 LMTK2Q8IWU2 1503 aa23.45■■□□□ 1.34
UBE2F-216ENST00000445676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.44■■□□□ 1.34
UBE2F-216ENST00000445676 RRP7BPQ9NSQ0 103 aa23.44■■□□□ 1.34
UBE2F-216ENST00000445676 ADGRB3O60242 1522 aa23.43■■□□□ 1.34
UBE2F-216ENST00000445676 KCNA6P17658 529 aa23.42■■□□□ 1.34
UBE2F-216ENST00000445676 STAG3Q9UJ98 1225 aa23.42■■□□□ 1.34
UBE2F-216ENST00000445676 NKTRP30414 1462 aaKnown RBP23.42■■□□□ 1.34
UBE2F-216ENST00000445676 DAPK1P53355 1430 aa23.42■■□□□ 1.34
UBE2F-216ENST00000445676 MYO5BQ9ULV0 1848 aa23.41■■□□□ 1.34
UBE2F-216ENST00000445676 IDI1Q13907 227 aa23.41■■□□□ 1.34
UBE2F-216ENST00000445676 PHLPP1O60346 1717 aa23.41■■□□□ 1.34
UBE2F-216ENST00000445676 KANK1Q14678 1352 aa23.4■■□□□ 1.34
UBE2F-216ENST00000445676 RBM33Q96EV2 1170 aaKnown RBP23.4■■□□□ 1.34
UBE2F-216ENST00000445676 SLC26A8Q96RN1 970 aa23.39■■□□□ 1.33
UBE2F-216ENST00000445676 NOS1P29475 1434 aa23.39■■□□□ 1.33
UBE2F-216ENST00000445676 PROSER2Q86WR7 435 aaPredicted RBP23.38■■□□□ 1.33
UBE2F-216ENST00000445676 CHD2O14647 1828 aaKnown RBP23.37■■□□□ 1.33
UBE2F-216ENST00000445676 GCC2Q8IWJ2 1684 aa23.32■■□□□ 1.32
UBE2F-216ENST00000445676 MSH6P52701 1360 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms