RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 NLRP1Q9C000 1473 aa12.02□□□□□ -0.49
BRAFP1-201ENST00000445336 RBM6P78332 1123 aaKnown RBP12.02□□□□□ -0.49
BRAFP1-201ENST00000445336 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
BRAFP1-201ENST00000445336 MYO5CQ9NQX4 1742 aa12.01□□□□□ -0.49
BRAFP1-201ENST00000445336 CLTCQ00610 1675 aaKnown RBP12.01□□□□□ -0.49
BRAFP1-201ENST00000445336 ANKLE2Q86XL3 938 aa12.01□□□□□ -0.49
BRAFP1-201ENST00000445336 BCL9LQ86UU0 1499 aa12□□□□□ -0.49
BRAFP1-201ENST00000445336 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
BRAFP1-201ENST00000445336 ARHGAP23Q9P227 1491 aa11.98□□□□□ -0.49
BRAFP1-201ENST00000445336 ABCC1P33527 1531 aa11.97□□□□□ -0.49
BRAFP1-201ENST00000445336 NGLY1Q96IV0 654 aa11.95□□□□□ -0.5
BRAFP1-201ENST00000445336 ITSN2Q9NZM3 1697 aa11.95□□□□□ -0.5
BRAFP1-201ENST00000445336 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
BRAFP1-201ENST00000445336 PLXNC1O60486 1568 aa11.94□□□□□ -0.5
BRAFP1-201ENST00000445336 DIP2AQ14689 1571 aa11.94□□□□□ -0.5
BRAFP1-201ENST00000445336 DCAF8L1A6NGE4 600 aa11.93□□□□□ -0.5
BRAFP1-201ENST00000445336 KIDINS220Q9ULH0 1771 aa11.92□□□□□ -0.5
BRAFP1-201ENST00000445336 MEX3CQ5U5Q3 659 aaKnown RBP11.92□□□□□ -0.5
BRAFP1-201ENST00000445336 MAP3K1Q13233 1512 aa11.92□□□□□ -0.5
BRAFP1-201ENST00000445336 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
BRAFP1-201ENST00000445336 SAMD9Q5K651 1589 aa11.91□□□□□ -0.5
BRAFP1-201ENST00000445336 NCOA3Q9Y6Q9 1424 aa11.91□□□□□ -0.5
BRAFP1-201ENST00000445336 NKTRP30414 1462 aaKnown RBP11.91□□□□□ -0.5
BRAFP1-201ENST00000445336 TIAM1Q13009 1591 aa11.9□□□□□ -0.5
BRAFP1-201ENST00000445336 EFCAB2Q5VUJ9 269 aa11.9□□□□□ -0.5
BRAFP1-201ENST00000445336 NINLQ9Y2I6 1382 aa11.89□□□□□ -0.51
BRAFP1-201ENST00000445336 NUP153P49790 1475 aaKnown RBP11.88□□□□□ -0.51
BRAFP1-201ENST00000445336 PZPP20742 1482 aa11.87□□□□□ -0.51
BRAFP1-201ENST00000445336 PLEKHD1A6NEE1 506 aa11.87□□□□□ -0.51
BRAFP1-201ENST00000445336 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
BRAFP1-201ENST00000445336 TNRQ92752 1358 aa11.86□□□□□ -0.51
BRAFP1-201ENST00000445336 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
BRAFP1-201ENST00000445336 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
BRAFP1-201ENST00000445336 NUTM2BA6NNL0 878 aaPredicted RBP11.86□□□□□ -0.51
BRAFP1-201ENST00000445336 NUTM2EB1AL46 878 aaPredicted RBP11.86□□□□□ -0.51
BRAFP1-201ENST00000445336 NUTM2DQ5VT03 806 aaPredicted RBP11.86□□□□□ -0.51
BRAFP1-201ENST00000445336 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
BRAFP1-201ENST00000445336 RALGAPBQ86X10 1494 aa11.85□□□□□ -0.51
BRAFP1-201ENST00000445336 MROH1Q8NDA8 1641 aa11.85□□□□□ -0.51
BRAFP1-201ENST00000445336 HRCP23327 699 aa11.84□□□□□ -0.51
BRAFP1-201ENST00000445336 AFF2P51816 1311 aa11.83□□□□□ -0.52
BRAFP1-201ENST00000445336 RTEL1-TNFRSF6BF6WH68 1400 aa11.83□□□□□ -0.52
BRAFP1-201ENST00000445336 PRELPP51888 382 aa11.83□□□□□ -0.52
BRAFP1-201ENST00000445336 PRDM15P57071 1507 aaPredicted RBP11.83□□□□□ -0.52
BRAFP1-201ENST00000445336 CHD4Q14839 1912 aa11.82□□□□□ -0.52
BRAFP1-201ENST00000445336 SLIT1O75093 1534 aa11.81□□□□□ -0.52
BRAFP1-201ENST00000445336 ZNF784Q8NCA9 323 aaPredicted RBP11.8□□□□□ -0.52
BRAFP1-201ENST00000445336 SETD5Q9C0A6 1442 aa11.8□□□□□ -0.52
BRAFP1-201ENST00000445336 ADGBQ8N7X0 1667 aa11.8□□□□□ -0.52
BRAFP1-201ENST00000445336 ATRNO75882 1429 aa11.79□□□□□ -0.52
BRAFP1-201ENST00000445336 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.79□□□□□ -0.52
BRAFP1-201ENST00000445336 CAMSAP2Q08AD1 1489 aa11.79□□□□□ -0.52
BRAFP1-201ENST00000445336 QTRT2Q9H974 415 aaKnown RBP11.77□□□□□ -0.52
BRAFP1-201ENST00000445336 MSH6P52701 1360 aa11.75□□□□□ -0.53
BRAFP1-201ENST00000445336 PTCH1Q13635 1447 aa11.74□□□□□ -0.53
BRAFP1-201ENST00000445336 MIA2Q96PC5 1412 aa11.74□□□□□ -0.53
BRAFP1-201ENST00000445336 INO80Q9ULG1 1556 aaPredicted RBP11.74□□□□□ -0.53
BRAFP1-201ENST00000445336 DISP2A7MBM2 1401 aa11.73□□□□□ -0.53
BRAFP1-201ENST00000445336 TMEM94Q12767 1356 aa11.73□□□□□ -0.53
BRAFP1-201ENST00000445336 SAMD9LQ8IVG5 1584 aa11.72□□□□□ -0.53
BRAFP1-201ENST00000445336 PREX2Q70Z35 1606 aa11.72□□□□□ -0.53
BRAFP1-201ENST00000445336 TRPC5Q9UL62 973 aaPredicted RBP11.72□□□□□ -0.53
BRAFP1-201ENST00000445336 RGPD1P0DJD0 1748 aa11.72□□□□□ -0.53
BRAFP1-201ENST00000445336 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.53
BRAFP1-201ENST00000445336 ARHGAP5Q13017 1502 aa11.71□□□□□ -0.54
BRAFP1-201ENST00000445336 AATKQ6ZMQ8 1374 aa11.71□□□□□ -0.54
BRAFP1-201ENST00000445336 A2MP01023 1474 aa11.7□□□□□ -0.54
BRAFP1-201ENST00000445336 LAMC1P11047 1609 aa11.7□□□□□ -0.54
BRAFP1-201ENST00000445336 KCNA6P17658 529 aa11.7□□□□□ -0.54
BRAFP1-201ENST00000445336 GPATCH8Q9UKJ3 1502 aaKnown RBP11.69□□□□□ -0.54
BRAFP1-201ENST00000445336 SLAIN2Q9P270 581 aa11.69□□□□□ -0.54
BRAFP1-201ENST00000445336 CDC42BPBQ9Y5S2 1711 aa11.69□□□□□ -0.54
BRAFP1-201ENST00000445336 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
BRAFP1-201ENST00000445336 SENP3Q9H4L4 574 aaPredicted RBP11.67□□□□□ -0.54
BRAFP1-201ENST00000445336 AFAP1Q8N556 730 aa11.65□□□□□ -0.54
BRAFP1-201ENST00000445336 PARD3Q8TEW0 1356 aa11.65□□□□□ -0.54
BRAFP1-201ENST00000445336 COL22A1Q8NFW1 1626 aaPredicted RBP11.65□□□□□ -0.54
BRAFP1-201ENST00000445336 GIGYF1O75420 1035 aaPredicted RBP11.64□□□□□ -0.55
BRAFP1-201ENST00000445336 DCCP43146 1447 aa11.64□□□□□ -0.55
BRAFP1-201ENST00000445336 FNBP4Q8N3X1 1017 aaPredicted RBP11.63□□□□□ -0.55
BRAFP1-201ENST00000445336 MARF1Q9Y4F3 1742 aaKnown RBP11.63□□□□□ -0.55
BRAFP1-201ENST00000445336 ARHGAP35Q9NRY4 1499 aa11.62□□□□□ -0.55
BRAFP1-201ENST00000445336 TET3O43151 1660 aa11.62□□□□□ -0.55
BRAFP1-201ENST00000445336 BAG6P46379 1132 aa11.61□□□□□ -0.55
BRAFP1-201ENST00000445336 PLEKHH2Q8IVE3 1493 aa11.61□□□□□ -0.55
BRAFP1-201ENST00000445336 ADGRB2O60241 1585 aa11.61□□□□□ -0.55
BRAFP1-201ENST00000445336 NCOA2Q15596 1464 aa11.6□□□□□ -0.55
BRAFP1-201ENST00000445336 CHD2O14647 1828 aaKnown RBP11.59□□□□□ -0.55
BRAFP1-201ENST00000445336 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
BRAFP1-201ENST00000445336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.58□□□□□ -0.56
BRAFP1-201ENST00000445336 HNRNPUL2Q1KMD3 747 aaKnown RBP11.58□□□□□ -0.56
BRAFP1-201ENST00000445336 PNPLA6Q8IY17 1366 aa11.58□□□□□ -0.56
BRAFP1-201ENST00000445336 KIAA1107Q9UPP5 1409 aa11.58□□□□□ -0.56
BRAFP1-201ENST00000445336 CROCC2H7BZ55 1655 aa11.58□□□□□ -0.56
BRAFP1-201ENST00000445336 RREB1Q92766 1687 aa11.58□□□□□ -0.56
BRAFP1-201ENST00000445336 CLIP1P30622 1438 aa11.56□□□□□ -0.56
BRAFP1-201ENST00000445336 LRRC59Q96AG4 307 aaKnown RBP11.56□□□□□ -0.56
BRAFP1-201ENST00000445336 NEXMIFQ5QGS0 1516 aa11.56□□□□□ -0.56
BRAFP1-201ENST00000445336 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
BRAFP1-201ENST00000445336 SYCP2Q9BX26 1530 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms