RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 EIF2AK4Q9P2K8 1649 aaKnown RBP22.02■■□□□ 1.11
COMMD3-202ENST00000444869 HSPA2P54652 639 aa22.01■■□□□ 1.11
COMMD3-202ENST00000444869 ZMYM3Q14202 1370 aa22■■□□□ 1.11
COMMD3-202ENST00000444869 RNF17Q9BXT8 1623 aaKnown RBP22■■□□□ 1.11
COMMD3-202ENST00000444869 GGT6Q6P531 493 aa21.99■■□□□ 1.11
COMMD3-202ENST00000444869 KDM5DQ9BY66 1539 aa21.98■■□□□ 1.11
COMMD3-202ENST00000444869 ABCC5O15440 1437 aa21.97■■□□□ 1.11
COMMD3-202ENST00000444869 ZNF142P52746 1687 aaPredicted RBP21.96■■□□□ 1.11
COMMD3-202ENST00000444869 DAPK1P53355 1430 aa21.96■■□□□ 1.11
COMMD3-202ENST00000444869 PTPRKQ15262 1439 aa21.96■■□□□ 1.11
COMMD3-202ENST00000444869 MYO3AQ8NEV4 1616 aa21.95■■□□□ 1.1
COMMD3-202ENST00000444869 STRCQ7RTU9 1775 aa21.95■■□□□ 1.1
COMMD3-202ENST00000444869 KIF3BO15066 747 aa21.95■■□□□ 1.1
COMMD3-202ENST00000444869 DUOX2Q9NRD8 1548 aa21.95■■□□□ 1.1
COMMD3-202ENST00000444869 MROH1Q8NDA8 1641 aa21.94■■□□□ 1.1
COMMD3-202ENST00000444869 ZC3H13Q5T200 1668 aaKnown RBP21.93■■□□□ 1.1
COMMD3-202ENST00000444869 PZPP20742 1482 aa21.89■■□□□ 1.09
COMMD3-202ENST00000444869 ERBINQ96RT1 1412 aa21.88■■□□□ 1.09
COMMD3-202ENST00000444869 KIF15Q9NS87 1388 aa21.87■■□□□ 1.09
COMMD3-202ENST00000444869 CEP170BQ9Y4F5 1589 aaPredicted RBP21.87■■□□□ 1.09
COMMD3-202ENST00000444869 ABCC3O15438 1527 aa21.87■■□□□ 1.09
COMMD3-202ENST00000444869 PRDM15P57071 1507 aaPredicted RBP21.86■■□□□ 1.09
COMMD3-202ENST00000444869 DEPDC5O75140 1603 aa21.86■■□□□ 1.09
COMMD3-202ENST00000444869 ADGRL2O95490 1459 aa21.85■■□□□ 1.09
COMMD3-202ENST00000444869 CEP152O94986 1710 aa21.84■■□□□ 1.09
COMMD3-202ENST00000444869 NCOA1Q15788 1441 aa21.84■■□□□ 1.09
COMMD3-202ENST00000444869 WASHC2CQ9Y4E1 1318 aa21.83■■□□□ 1.09
COMMD3-202ENST00000444869 CAMSAP1Q5T5Y3 1602 aa21.83■■□□□ 1.08
COMMD3-202ENST00000444869 ANKRD30AQ9BXX3 1397 aa21.81■■□□□ 1.08
COMMD3-202ENST00000444869 A2ML1A8K2U0 1454 aa21.8■■□□□ 1.08
COMMD3-202ENST00000444869 PLA2R1Q13018 1463 aa21.8■■□□□ 1.08
COMMD3-202ENST00000444869 PTPRTO14522 1441 aa21.79■■□□□ 1.08
COMMD3-202ENST00000444869 SPATA31D1Q6ZQQ2 1576 aa21.78■■□□□ 1.08
COMMD3-202ENST00000444869 TNRQ92752 1358 aa21.78■■□□□ 1.08
COMMD3-202ENST00000444869 RRP7BPQ9NSQ0 103 aa21.78■■□□□ 1.08
COMMD3-202ENST00000444869 FBXO31Q5XUX0 539 aaPredicted RBP21.76■■□□□ 1.07
COMMD3-202ENST00000444869 DMRT2Q9Y5R5 561 aa21.76■■□□□ 1.07
COMMD3-202ENST00000444869 VWDEQ8N2E2 1590 aa21.75■■□□□ 1.07
COMMD3-202ENST00000444869 FAM50AQ14320 339 aaKnown RBP21.75■■□□□ 1.07
COMMD3-202ENST00000444869 ILDR1Q86SU0 546 aaPredicted RBP21.75■■□□□ 1.07
COMMD3-202ENST00000444869 CHIC2Q9UKJ5 165 aa21.74■■□□□ 1.07
COMMD3-202ENST00000444869 NLRP1Q9C000 1473 aa21.74■■□□□ 1.07
COMMD3-202ENST00000444869 ERVK-7P63135 1459 aa21.73■■□□□ 1.07
COMMD3-202ENST00000444869 ARHGAP31Q2M1Z3 1444 aa21.72■■□□□ 1.07
COMMD3-202ENST00000444869 LMTK2Q8IWU2 1503 aa21.72■■□□□ 1.07
COMMD3-202ENST00000444869 POLR1AO95602 1720 aaPredicted RBP21.71■■□□□ 1.07
COMMD3-202ENST00000444869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.71■■□□□ 1.07
COMMD3-202ENST00000444869 CFAP65Q6ZU64 1925 aaKnown RBP21.67■■□□□ 1.06
COMMD3-202ENST00000444869 UGGT1Q9NYU2 1555 aa21.67■■□□□ 1.06
COMMD3-202ENST00000444869 ANKRD50Q9ULJ7 1429 aa21.67■■□□□ 1.06
COMMD3-202ENST00000444869 ROCK1Q13464 1354 aa21.66■■□□□ 1.06
COMMD3-202ENST00000444869 KANK1Q14678 1352 aa21.66■■□□□ 1.06
COMMD3-202ENST00000444869 NEURL4Q96JN8 1562 aa21.65■■□□□ 1.06
COMMD3-202ENST00000444869 PKD2Q13563 968 aa21.65■■□□□ 1.06
COMMD3-202ENST00000444869 FBXO41Q8TF61 875 aa21.65■■□□□ 1.06
COMMD3-202ENST00000444869 UNC13BO14795 1591 aa21.65■■□□□ 1.06
COMMD3-202ENST00000444869 EFCAB6Q5THR3 1501 aa21.65■■□□□ 1.06
COMMD3-202ENST00000444869 LTBP4Q8N2S1 1624 aa21.64■■□□□ 1.05
COMMD3-202ENST00000444869 UBR1Q8IWV7 1749 aa21.63■■□□□ 1.05
COMMD3-202ENST00000444869 NCKAP5LQ9HCH0 1330 aa21.63■■□□□ 1.05
COMMD3-202ENST00000444869 PPARGC1BQ86YN6 1023 aaKnown RBP21.63■■□□□ 1.05
COMMD3-202ENST00000444869 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
COMMD3-202ENST00000444869 CERKQ8TCT0 537 aa21.62■■□□□ 1.05
COMMD3-202ENST00000444869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.61■■□□□ 1.05
COMMD3-202ENST00000444869 TET3O43151 1660 aa21.6■■□□□ 1.05
COMMD3-202ENST00000444869 KDM5AP29375 1690 aaKnown RBP21.58■■□□□ 1.05
COMMD3-202ENST00000444869 GCC2Q8IWJ2 1684 aa21.58■■□□□ 1.05
COMMD3-202ENST00000444869 SYNMO15061 1565 aa21.57■■□□□ 1.04
COMMD3-202ENST00000444869 THEMISQ8N1K5 641 aaPredicted RBP21.57■■□□□ 1.04
COMMD3-202ENST00000444869 MED14O60244 1454 aa21.57■■□□□ 1.04
COMMD3-202ENST00000444869 PIK3C2BO00750 1634 aa21.56■■□□□ 1.04
COMMD3-202ENST00000444869 RPRD2Q5VT52 1461 aaKnown RBP21.56■■□□□ 1.04
COMMD3-202ENST00000444869 NOS1P29475 1434 aa21.55■■□□□ 1.04
COMMD3-202ENST00000444869 IQGAP3Q86VI3 1631 aa21.55■■□□□ 1.04
COMMD3-202ENST00000444869 IQSEC2Q5JU85 1478 aa21.54■■□□□ 1.04
COMMD3-202ENST00000444869 SLIT1O75093 1534 aa21.53■■□□□ 1.04
COMMD3-202ENST00000444869 IQGAP1P46940 1657 aa21.53■■□□□ 1.04
COMMD3-202ENST00000444869 ARHGAP23Q9P227 1491 aa21.52■■□□□ 1.04
COMMD3-202ENST00000444869 ANKLE2Q86XL3 938 aa21.51■■□□□ 1.03
COMMD3-202ENST00000444869 ZNF335Q9H4Z2 1342 aaPredicted RBP21.5■■□□□ 1.03
COMMD3-202ENST00000444869 E9PCH4 1651 aa21.5■■□□□ 1.03
COMMD3-202ENST00000444869 NPHP4O75161 1426 aaPredicted RBP21.49■■□□□ 1.03
COMMD3-202ENST00000444869 ITGAEP38570 1179 aa21.48■■□□□ 1.03
COMMD3-202ENST00000444869 ADGRB3O60242 1522 aa21.47■■□□□ 1.03
COMMD3-202ENST00000444869 SCAF11Q99590 1463 aaKnown RBP21.46■■□□□ 1.03
COMMD3-202ENST00000444869 IDI1Q13907 227 aa21.43■■□□□ 1.02
COMMD3-202ENST00000444869 CPS1P31327 1500 aa21.43■■□□□ 1.02
COMMD3-202ENST00000444869 NAIPQ13075 1403 aa21.42■■□□□ 1.02
COMMD3-202ENST00000444869 TMEM2Q9UHN6 1383 aa21.42■■□□□ 1.02
COMMD3-202ENST00000444869 MYO5BQ9ULV0 1848 aa21.41■■□□□ 1.02
COMMD3-202ENST00000444869 SLC52A1Q9NWF4 448 aa21.4■■□□□ 1.02
COMMD3-202ENST00000444869 STRCP1A6NGW2 1772 aa21.4■■□□□ 1.02
COMMD3-202ENST00000444869 NUP155O75694 1391 aa21.39■■□□□ 1.02
COMMD3-202ENST00000444869 TMEM131LA2VDJ0 1609 aa21.39■■□□□ 1.01
COMMD3-202ENST00000444869 HFM1A2PYH4 1435 aa21.38■■□□□ 1.01
COMMD3-202ENST00000444869 LTKP29376 864 aa21.38■■□□□ 1.01
COMMD3-202ENST00000444869 SPHKAPQ2M3C7 1700 aa21.36■■□□□ 1.01
COMMD3-202ENST00000444869 TXNDC2Q86VQ3 553 aa21.35■■□□□ 1.01
COMMD3-202ENST00000444869 STAG3Q9UJ98 1225 aa21.34■■□□□ 1.01
COMMD3-202ENST00000444869 ZFYVE9O95405 1425 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms