RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
SSBP3-208ENST00000444533 WASHC2CQ9Y4E1 1318 aa21.2■□□□□ 0.98
SSBP3-208ENST00000444533 KANK1Q14678 1352 aa21.2■□□□□ 0.98
SSBP3-208ENST00000444533 RIMS1Q86UR5 1692 aaKnown RBP21.19■□□□□ 0.98
SSBP3-208ENST00000444533 PLPPR3Q6T4P5 718 aa21.18■□□□□ 0.98
SSBP3-208ENST00000444533 PTPRMP28827 1452 aa21.18■□□□□ 0.98
SSBP3-208ENST00000444533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.98
SSBP3-208ENST00000444533 FAM135AQ9P2D6 1515 aa21.17■□□□□ 0.98
SSBP3-208ENST00000444533 RNF17Q9BXT8 1623 aaKnown RBP21.15■□□□□ 0.98
SSBP3-208ENST00000444533 KDM5DQ9BY66 1539 aa21.14■□□□□ 0.97
SSBP3-208ENST00000444533 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
SSBP3-208ENST00000444533 CLTCQ00610 1675 aaKnown RBP21.1■□□□□ 0.97
SSBP3-208ENST00000444533 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
SSBP3-208ENST00000444533 MROH2AA6NES4 1674 aa21.09■□□□□ 0.97
SSBP3-208ENST00000444533 ZC3H13Q5T200 1668 aaKnown RBP21.09■□□□□ 0.97
SSBP3-208ENST00000444533 NAIPQ13075 1403 aa21.08■□□□□ 0.97
SSBP3-208ENST00000444533 PRDM15P57071 1507 aaPredicted RBP21.08■□□□□ 0.96
SSBP3-208ENST00000444533 ACIN1Q9UKV3 1341 aaKnown RBP21.07■□□□□ 0.96
SSBP3-208ENST00000444533 CEBPAP49715 358 aaPredicted RBP21.07■□□□□ 0.96
SSBP3-208ENST00000444533 DEPDC5O75140 1603 aa21.06■□□□□ 0.96
SSBP3-208ENST00000444533 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
SSBP3-208ENST00000444533 ABCC3O15438 1527 aa21.04■□□□□ 0.96
SSBP3-208ENST00000444533 C3P01024 1663 aa21.03■□□□□ 0.96
SSBP3-208ENST00000444533 NUP155O75694 1391 aa21.03■□□□□ 0.96
SSBP3-208ENST00000444533 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
SSBP3-208ENST00000444533 MROH1Q8NDA8 1641 aa21.03■□□□□ 0.96
SSBP3-208ENST00000444533 NPATQ14207 1427 aa21.02■□□□□ 0.96
SSBP3-208ENST00000444533 UNC13BO14795 1591 aa21.01■□□□□ 0.95
SSBP3-208ENST00000444533 PZPP20742 1482 aa21■□□□□ 0.95
SSBP3-208ENST00000444533 CEP152O94986 1710 aa20.99■□□□□ 0.95
SSBP3-208ENST00000444533 SETD5Q9C0A6 1442 aa20.99■□□□□ 0.95
SSBP3-208ENST00000444533 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
SSBP3-208ENST00000444533 LMTK2Q8IWU2 1503 aa20.98■□□□□ 0.95
SSBP3-208ENST00000444533 CAMSAP1Q5T5Y3 1602 aa20.97■□□□□ 0.95
SSBP3-208ENST00000444533 UHRF1BP1Q6BDS2 1440 aa20.96■□□□□ 0.95
SSBP3-208ENST00000444533 SETD1BQ9UPS6 1966 aaKnown RBP20.96■□□□□ 0.95
SSBP3-208ENST00000444533 VWDEQ8N2E2 1590 aa20.96■□□□□ 0.95
SSBP3-208ENST00000444533 ARHGAP31Q2M1Z3 1444 aa20.95■□□□□ 0.95
SSBP3-208ENST00000444533 TNRQ92752 1358 aa20.94■□□□□ 0.94
SSBP3-208ENST00000444533 FBXO31Q5XUX0 539 aaPredicted RBP20.93■□□□□ 0.94
SSBP3-208ENST00000444533 IQGAP3Q86VI3 1631 aa20.93■□□□□ 0.94
SSBP3-208ENST00000444533 RPRD2Q5VT52 1461 aaKnown RBP20.92■□□□□ 0.94
SSBP3-208ENST00000444533 EFCAB6Q5THR3 1501 aa20.92■□□□□ 0.94
SSBP3-208ENST00000444533 TET3O43151 1660 aa20.92■□□□□ 0.94
SSBP3-208ENST00000444533 PREX1Q8TCU6 1659 aa20.92■□□□□ 0.94
SSBP3-208ENST00000444533 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
SSBP3-208ENST00000444533 ERVK-7P63135 1459 aa20.89■□□□□ 0.94
SSBP3-208ENST00000444533 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
SSBP3-208ENST00000444533 HRCP23327 699 aa20.87■□□□□ 0.93
SSBP3-208ENST00000444533 NLRP1Q9C000 1473 aa20.87■□□□□ 0.93
SSBP3-208ENST00000444533 SPATA31D1Q6ZQQ2 1576 aa20.86■□□□□ 0.93
SSBP3-208ENST00000444533 CFAP65Q6ZU64 1925 aaKnown RBP20.85■□□□□ 0.93
SSBP3-208ENST00000444533 STAG3Q9UJ98 1225 aa20.85■□□□□ 0.93
SSBP3-208ENST00000444533 LMTK3Q96Q04 1460 aa20.84■□□□□ 0.93
SSBP3-208ENST00000444533 MYO3AQ8NEV4 1616 aa20.83■□□□□ 0.93
SSBP3-208ENST00000444533 PKD2Q13563 968 aa20.83■□□□□ 0.93
SSBP3-208ENST00000444533 SLC52A1Q9NWF4 448 aa20.83■□□□□ 0.93
SSBP3-208ENST00000444533 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
SSBP3-208ENST00000444533 THEMISQ8N1K5 641 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-208ENST00000444533 MPHOSPH9Q99550 1183 aa20.81■□□□□ 0.92
SSBP3-208ENST00000444533 CEP170BQ9Y4F5 1589 aaPredicted RBP20.8■□□□□ 0.92
SSBP3-208ENST00000444533 E9PCH4 1651 aa20.8■□□□□ 0.92
SSBP3-208ENST00000444533 NOS1P29475 1434 aa20.79■□□□□ 0.92
SSBP3-208ENST00000444533 HSPA2P54652 639 aa20.79■□□□□ 0.92
SSBP3-208ENST00000444533 ZNF142P52746 1687 aaPredicted RBP20.77■□□□□ 0.92
SSBP3-208ENST00000444533 UGGT1Q9NYU2 1555 aa20.77■□□□□ 0.92
SSBP3-208ENST00000444533 IDI1Q13907 227 aa20.75■□□□□ 0.91
SSBP3-208ENST00000444533 CHGAP10645 457 aaKnown RBP20.74■□□□□ 0.91
SSBP3-208ENST00000444533 SYNMO15061 1565 aa20.72■□□□□ 0.91
SSBP3-208ENST00000444533 DMRT2Q9Y5R5 561 aa20.72■□□□□ 0.91
SSBP3-208ENST00000444533 SPHKAPQ2M3C7 1700 aa20.72■□□□□ 0.91
SSBP3-208ENST00000444533 PTPRTO14522 1441 aa20.7■□□□□ 0.9
SSBP3-208ENST00000444533 HDGFP51858 240 aaKnown RBP20.7■□□□□ 0.9
SSBP3-208ENST00000444533 ANKLE2Q86XL3 938 aa20.7■□□□□ 0.9
SSBP3-208ENST00000444533 EID1Q9Y6B2 187 aa20.7■□□□□ 0.9
SSBP3-208ENST00000444533 FOXD1Q16676 465 aa20.69■□□□□ 0.9
SSBP3-208ENST00000444533 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
SSBP3-208ENST00000444533 PIK3C2BO00750 1634 aa20.68■□□□□ 0.9
SSBP3-208ENST00000444533 PCGF6Q9BYE7 350 aa20.68■□□□□ 0.9
SSBP3-208ENST00000444533 TRPM2O94759 1503 aa20.68■□□□□ 0.9
SSBP3-208ENST00000444533 CCDC144AA2RUR9 1427 aa20.66■□□□□ 0.9
SSBP3-208ENST00000444533 ADGRB3O60242 1522 aa20.66■□□□□ 0.9
SSBP3-208ENST00000444533 KDM5AP29375 1690 aaKnown RBP20.66■□□□□ 0.9
SSBP3-208ENST00000444533 UBR1Q8IWV7 1749 aa20.65■□□□□ 0.9
SSBP3-208ENST00000444533 ZNF326Q5BKZ1 582 aaKnown RBP20.64■□□□□ 0.89
SSBP3-208ENST00000444533 TMEM2Q9UHN6 1383 aa20.62■□□□□ 0.89
SSBP3-208ENST00000444533 NCKAP5LQ9HCH0 1330 aa20.62■□□□□ 0.89
SSBP3-208ENST00000444533 PPP1R15AO75807 674 aaPredicted RBP20.62■□□□□ 0.89
SSBP3-208ENST00000444533 TXNDC2Q86VQ3 553 aa20.62■□□□□ 0.89
SSBP3-208ENST00000444533 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
SSBP3-208ENST00000444533 BCANQ96GW7 911 aa20.59■□□□□ 0.89
SSBP3-208ENST00000444533 CLTCL1P53675 1640 aa20.59■□□□□ 0.89
SSBP3-208ENST00000444533 SLIT1O75093 1534 aa20.58■□□□□ 0.89
SSBP3-208ENST00000444533 KIF1BO60333 1816 aa20.58■□□□□ 0.89
SSBP3-208ENST00000444533 SCAF11Q99590 1463 aaKnown RBP20.58■□□□□ 0.89
SSBP3-208ENST00000444533 TMEM131LA2VDJ0 1609 aa20.58■□□□□ 0.89
SSBP3-208ENST00000444533 POLR1AO95602 1720 aaPredicted RBP20.56■□□□□ 0.88
SSBP3-208ENST00000444533 ARHGAP23Q9P227 1491 aa20.56■□□□□ 0.88
SSBP3-208ENST00000444533 RIMS2Q9UQ26 1411 aa20.55■□□□□ 0.88
SSBP3-208ENST00000444533 STRCQ7RTU9 1775 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms