RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 KDM5DQ9BY66 1539 aa37.1■■■■□ 3.53
TMEM238-201ENST00000444469 FAM135AQ9P2D6 1515 aa37.1■■■■□ 3.53
TMEM238-201ENST00000444469 CEP170BQ9Y4F5 1589 aaPredicted RBP37.08■■■■□ 3.53
TMEM238-201ENST00000444469 ZNF142P52746 1687 aaPredicted RBP37.07■■■■□ 3.52
TMEM238-201ENST00000444469 MAST1Q9Y2H9 1570 aa37.06■■■■□ 3.52
TMEM238-201ENST00000444469 PKD2Q13563 968 aa37■■■■□ 3.51
TMEM238-201ENST00000444469 NCKAP5LQ9HCH0 1330 aa37■■■■□ 3.51
TMEM238-201ENST00000444469 TNRQ92752 1358 aa36.99■■■■□ 3.51
TMEM238-201ENST00000444469 PLA2R1Q13018 1463 aa36.99■■■■□ 3.51
TMEM238-201ENST00000444469 PZPP20742 1482 aa36.98■■■■□ 3.51
TMEM238-201ENST00000444469 A2ML1A8K2U0 1454 aa36.97■■■■□ 3.51
TMEM238-201ENST00000444469 FBXO31Q5XUX0 539 aaPredicted RBP36.95■■■■□ 3.51
TMEM238-201ENST00000444469 EIF2AK4Q9P2K8 1649 aaKnown RBP36.92■■■■□ 3.5
TMEM238-201ENST00000444469 PTPN23Q9H3S7 1636 aa36.91■■■■□ 3.5
TMEM238-201ENST00000444469 RNF17Q9BXT8 1623 aaKnown RBP36.9■■■■□ 3.5
TMEM238-201ENST00000444469 DUOX2Q9NRD8 1548 aa36.89■■■■□ 3.5
TMEM238-201ENST00000444469 DNMT1P26358 1616 aaKnown RBP36.87■■■■□ 3.49
TMEM238-201ENST00000444469 TCOF1Q13428 1488 aaKnown RBP36.87■■■■□ 3.49
TMEM238-201ENST00000444469 ZC3H13Q5T200 1668 aaKnown RBP36.86■■■■□ 3.49
TMEM238-201ENST00000444469 SHANK2Q9UPX8 1470 aa36.86■■■■□ 3.49
TMEM238-201ENST00000444469 FGD6Q6ZV73 1430 aa36.85■■■■□ 3.49
TMEM238-201ENST00000444469 KIF15Q9NS87 1388 aa36.84■■■■□ 3.49
TMEM238-201ENST00000444469 LTBP4Q8N2S1 1624 aa36.84■■■■□ 3.49
TMEM238-201ENST00000444469 ABCC3O15438 1527 aa36.83■■■■□ 3.49
TMEM238-201ENST00000444469 ABCC5O15440 1437 aa36.82■■■■□ 3.48
TMEM238-201ENST00000444469 NLRP1Q9C000 1473 aa36.82■■■■□ 3.48
TMEM238-201ENST00000444469 CROCC2H7BZ55 1655 aa36.81■■■■□ 3.48
TMEM238-201ENST00000444469 RRP7BPQ9NSQ0 103 aa36.81■■■■□ 3.48
TMEM238-201ENST00000444469 DAPK1P53355 1430 aa36.79■■■■□ 3.48
TMEM238-201ENST00000444469 THEMISQ8N1K5 641 aaPredicted RBP36.79■■■■□ 3.48
TMEM238-201ENST00000444469 IQSEC2Q5JU85 1478 aa36.79■■■■□ 3.48
TMEM238-201ENST00000444469 ZNF335Q9H4Z2 1342 aaPredicted RBP36.78■■■■□ 3.48
TMEM238-201ENST00000444469 ERBINQ96RT1 1412 aa36.76■■■■□ 3.48
TMEM238-201ENST00000444469 ANKLE2Q86XL3 938 aa36.74■■■■□ 3.47
TMEM238-201ENST00000444469 UGGT1Q9NYU2 1555 aa36.74■■■■□ 3.47
TMEM238-201ENST00000444469 MROH1Q8NDA8 1641 aa36.72■■■■□ 3.47
TMEM238-201ENST00000444469 POLR1AO95602 1720 aaPredicted RBP36.71■■■■□ 3.47
TMEM238-201ENST00000444469 ANKRD30AQ9BXX3 1397 aa36.71■■■■□ 3.47
TMEM238-201ENST00000444469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.71■■■■□ 3.47
TMEM238-201ENST00000444469 CEP152O94986 1710 aa36.7■■■■□ 3.47
TMEM238-201ENST00000444469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.69■■■■□ 3.46
TMEM238-201ENST00000444469 CHIC2Q9UKJ5 165 aa36.69■■■■□ 3.46
TMEM238-201ENST00000444469 SPATA31D1Q6ZQQ2 1576 aa36.69■■■■□ 3.46
TMEM238-201ENST00000444469 ERVK-7P63135 1459 aa36.69■■■■□ 3.46
TMEM238-201ENST00000444469 KANK1Q14678 1352 aa36.68■■■■□ 3.46
TMEM238-201ENST00000444469 FAM50AQ14320 339 aaKnown RBP36.66■■■■□ 3.46
TMEM238-201ENST00000444469 PRDM15P57071 1507 aaPredicted RBP36.65■■■■□ 3.46
TMEM238-201ENST00000444469 NEURL4Q96JN8 1562 aa36.61■■■■□ 3.45
TMEM238-201ENST00000444469 UBAP1LF5GYI3 381 aa36.58■■■■□ 3.45
TMEM238-201ENST00000444469 NPHP4O75161 1426 aaPredicted RBP36.57■■■■□ 3.44
TMEM238-201ENST00000444469 ARHGAP31Q2M1Z3 1444 aa36.56■■■■□ 3.44
TMEM238-201ENST00000444469 DEPDC5O75140 1603 aa36.55■■■■□ 3.44
TMEM238-201ENST00000444469 CFAP65Q6ZU64 1925 aaKnown RBP36.52■■■■□ 3.44
TMEM238-201ENST00000444469 CPS1P31327 1500 aa36.51■■■■□ 3.44
TMEM238-201ENST00000444469 MED14O60244 1454 aa36.5■■■■□ 3.43
TMEM238-201ENST00000444469 ADGRL2O95490 1459 aa36.49■■■■□ 3.43
TMEM238-201ENST00000444469 STAG3Q9UJ98 1225 aa36.47■■■■□ 3.43
TMEM238-201ENST00000444469 IQGAP1P46940 1657 aa36.46■■■■□ 3.43
TMEM238-201ENST00000444469 UBR1Q8IWV7 1749 aa36.45■■■■□ 3.43
TMEM238-201ENST00000444469 LMTK2Q8IWU2 1503 aa36.43■■■■□ 3.42
TMEM238-201ENST00000444469 EID1Q9Y6B2 187 aa36.4■■■■□ 3.42
TMEM238-201ENST00000444469 ANKRD50Q9ULJ7 1429 aa36.4■■■■□ 3.42
TMEM238-201ENST00000444469 SCAF11Q99590 1463 aaKnown RBP36.39■■■■□ 3.42
TMEM238-201ENST00000444469 VWDEQ8N2E2 1590 aa36.39■■■■□ 3.42
TMEM238-201ENST00000444469 SCAF1Q9H7N4 1312 aaKnown RBP36.38■■■■□ 3.41
TMEM238-201ENST00000444469 DISP3Q9P2K9 1392 aa36.38■■■■□ 3.41
TMEM238-201ENST00000444469 TOM1O60784 492 aa36.37■■■■□ 3.41
TMEM238-201ENST00000444469 TXNDC2Q86VQ3 553 aa36.37■■■■□ 3.41
TMEM238-201ENST00000444469 PIK3C2BO00750 1634 aa36.33■■■■□ 3.41
TMEM238-201ENST00000444469 SLIT1O75093 1534 aa36.33■■■■□ 3.41
TMEM238-201ENST00000444469 EFCAB6Q5THR3 1501 aa36.33■■■■□ 3.41
TMEM238-201ENST00000444469 ARHGAP23Q9P227 1491 aa36.31■■■■□ 3.4
TMEM238-201ENST00000444469 PIP4K2BP78356 416 aa36.3■■■■□ 3.4
TMEM238-201ENST00000444469 LTKP29376 864 aa36.27■■■■□ 3.4
TMEM238-201ENST00000444469 IDI1Q13907 227 aa36.27■■■■□ 3.4
TMEM238-201ENST00000444469 TMEM2Q9UHN6 1383 aa36.27■■■■□ 3.4
TMEM238-201ENST00000444469 ITGAEP38570 1179 aa36.23■■■■□ 3.39
TMEM238-201ENST00000444469 PPARGC1BQ86YN6 1023 aaKnown RBP36.23■■■■□ 3.39
TMEM238-201ENST00000444469 SLC52A1Q9NWF4 448 aa36.23■■■■□ 3.39
TMEM238-201ENST00000444469 NOS1P29475 1434 aa36.23■■■■□ 3.39
TMEM238-201ENST00000444469 RPRD2Q5VT52 1461 aaKnown RBP36.23■■■■□ 3.39
TMEM238-201ENST00000444469 SYNMO15061 1565 aa36.23■■■■□ 3.39
TMEM238-201ENST00000444469 KDM5AP29375 1690 aaKnown RBP36.23■■■■□ 3.39
TMEM238-201ENST00000444469 ROCK1Q13464 1354 aa36.22■■■■□ 3.39
TMEM238-201ENST00000444469 TET3O43151 1660 aa36.18■■■■□ 3.38
TMEM238-201ENST00000444469 ADGRB3O60242 1522 aa36.17■■■■□ 3.38
TMEM238-201ENST00000444469 LRRC7Q96NW7 1537 aa36.16■■■■□ 3.38
TMEM238-201ENST00000444469 UNC13BO14795 1591 aa36.15■■■■□ 3.38
TMEM238-201ENST00000444469 STRCP1A6NGW2 1772 aa36.13■■■■□ 3.37
TMEM238-201ENST00000444469 BCANQ96GW7 911 aa36.13■■■■□ 3.37
TMEM238-201ENST00000444469 GCC2Q8IWJ2 1684 aa36.11■■■■□ 3.37
TMEM238-201ENST00000444469 HSPA1LP34931 641 aa36.1■■■■□ 3.37
TMEM238-201ENST00000444469 HDGFP51858 240 aaKnown RBP36.07■■■■□ 3.36
TMEM238-201ENST00000444469 PPP1R15AO75807 674 aaPredicted RBP36.05■■■■□ 3.36
TMEM238-201ENST00000444469 CHGAP10645 457 aaKnown RBP36.05■■■■□ 3.36
TMEM238-201ENST00000444469 NUP155O75694 1391 aa36.04■■■■□ 3.36
TMEM238-201ENST00000444469 SLC26A8Q96RN1 970 aa36.03■■■■□ 3.36
TMEM238-201ENST00000444469 IQGAP3Q86VI3 1631 aa36.01■■■■□ 3.36
TMEM238-201ENST00000444469 KCNA6P17658 529 aa35.98■■■■□ 3.35
TMEM238-201ENST00000444469 E9PCH4 1651 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms