RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 SHANK2Q9UPX8 1470 aa25.28■■□□□ 1.64
ATG4C-205ENST00000443289 STRCQ7RTU9 1775 aa25.27■■□□□ 1.64
ATG4C-205ENST00000443289 FBXO41Q8TF61 875 aa25.27■■□□□ 1.64
ATG4C-205ENST00000443289 DAPK1P53355 1430 aa25.25■■□□□ 1.63
ATG4C-205ENST00000443289 DUOX2Q9NRD8 1548 aa25.25■■□□□ 1.63
ATG4C-205ENST00000443289 NCOA1Q15788 1441 aa25.24■■□□□ 1.63
ATG4C-205ENST00000443289 PTPRTO14522 1441 aa25.23■■□□□ 1.63
ATG4C-205ENST00000443289 KIF15Q9NS87 1388 aa25.23■■□□□ 1.63
ATG4C-205ENST00000443289 RRP7BPQ9NSQ0 103 aa25.23■■□□□ 1.63
ATG4C-205ENST00000443289 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
ATG4C-205ENST00000443289 PZPP20742 1482 aa25.22■■□□□ 1.63
ATG4C-205ENST00000443289 FBXO31Q5XUX0 539 aaPredicted RBP25.22■■□□□ 1.63
ATG4C-205ENST00000443289 RNF17Q9BXT8 1623 aaKnown RBP25.21■■□□□ 1.63
ATG4C-205ENST00000443289 TNRQ92752 1358 aa25.2■■□□□ 1.63
ATG4C-205ENST00000443289 DNMT1P26358 1616 aaKnown RBP25.2■■□□□ 1.62
ATG4C-205ENST00000443289 CAMSAP1Q5T5Y3 1602 aa25.2■■□□□ 1.62
ATG4C-205ENST00000443289 MYO3AQ8NEV4 1616 aa25.2■■□□□ 1.62
ATG4C-205ENST00000443289 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.62
ATG4C-205ENST00000443289 CERKQ8TCT0 537 aa25.19■■□□□ 1.62
ATG4C-205ENST00000443289 ANKRD30AQ9BXX3 1397 aa25.18■■□□□ 1.62
ATG4C-205ENST00000443289 CEP170BQ9Y4F5 1589 aaPredicted RBP25.18■■□□□ 1.62
ATG4C-205ENST00000443289 CHIC2Q9UKJ5 165 aa25.18■■□□□ 1.62
ATG4C-205ENST00000443289 ZNF142P52746 1687 aaPredicted RBP25.17■■□□□ 1.62
ATG4C-205ENST00000443289 A2ML1A8K2U0 1454 aa25.17■■□□□ 1.62
ATG4C-205ENST00000443289 FAM50AQ14320 339 aaKnown RBP25.17■■□□□ 1.62
ATG4C-205ENST00000443289 ERBINQ96RT1 1412 aa25.17■■□□□ 1.62
ATG4C-205ENST00000443289 PKD2Q13563 968 aa25.16■■□□□ 1.62
ATG4C-205ENST00000443289 PLA2R1Q13018 1463 aa25.15■■□□□ 1.62
ATG4C-205ENST00000443289 ABCC3O15438 1527 aa25.15■■□□□ 1.62
ATG4C-205ENST00000443289 NCKAP5LQ9HCH0 1330 aa25.14■■□□□ 1.62
ATG4C-205ENST00000443289 ZC3H13Q5T200 1668 aaKnown RBP25.13■■□□□ 1.61
ATG4C-205ENST00000443289 MROH1Q8NDA8 1641 aa25.11■■□□□ 1.61
ATG4C-205ENST00000443289 NLRP1Q9C000 1473 aa25.09■■□□□ 1.61
ATG4C-205ENST00000443289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.08■■□□□ 1.61
ATG4C-205ENST00000443289 THEMISQ8N1K5 641 aaPredicted RBP25.07■■□□□ 1.6
ATG4C-205ENST00000443289 ADGRL2O95490 1459 aa25.07■■□□□ 1.6
ATG4C-205ENST00000443289 KANK1Q14678 1352 aa25.06■■□□□ 1.6
ATG4C-205ENST00000443289 PRDM15P57071 1507 aaPredicted RBP25.06■■□□□ 1.6
ATG4C-205ENST00000443289 SPATA31D1Q6ZQQ2 1576 aa25.04■■□□□ 1.6
ATG4C-205ENST00000443289 ARHGAP31Q2M1Z3 1444 aa25.03■■□□□ 1.6
ATG4C-205ENST00000443289 ERVK-7P63135 1459 aa25.03■■□□□ 1.6
ATG4C-205ENST00000443289 CEP152O94986 1710 aa25.02■■□□□ 1.6
ATG4C-205ENST00000443289 ANKLE2Q86XL3 938 aa25.01■■□□□ 1.59
ATG4C-205ENST00000443289 UGGT1Q9NYU2 1555 aa25.01■■□□□ 1.59
ATG4C-205ENST00000443289 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
ATG4C-205ENST00000443289 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
ATG4C-205ENST00000443289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.99■■□□□ 1.59
ATG4C-205ENST00000443289 ANKRD50Q9ULJ7 1429 aa24.98■■□□□ 1.59
ATG4C-205ENST00000443289 LTBP4Q8N2S1 1624 aa24.97■■□□□ 1.59
ATG4C-205ENST00000443289 ZNF335Q9H4Z2 1342 aaPredicted RBP24.95■■□□□ 1.58
ATG4C-205ENST00000443289 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.58
ATG4C-205ENST00000443289 ROCK1Q13464 1354 aa24.93■■□□□ 1.58
ATG4C-205ENST00000443289 VWDEQ8N2E2 1590 aa24.93■■□□□ 1.58
ATG4C-205ENST00000443289 CFAP65Q6ZU64 1925 aaKnown RBP24.93■■□□□ 1.58
ATG4C-205ENST00000443289 IQSEC2Q5JU85 1478 aa24.91■■□□□ 1.58
ATG4C-205ENST00000443289 POLR1AO95602 1720 aaPredicted RBP24.9■■□□□ 1.58
ATG4C-205ENST00000443289 NEURL4Q96JN8 1562 aa24.88■■□□□ 1.57
ATG4C-205ENST00000443289 ITGAEP38570 1179 aa24.88■■□□□ 1.57
ATG4C-205ENST00000443289 MED14O60244 1454 aa24.88■■□□□ 1.57
ATG4C-205ENST00000443289 NPHP4O75161 1426 aaPredicted RBP24.86■■□□□ 1.57
ATG4C-205ENST00000443289 STAG3Q9UJ98 1225 aa24.84■■□□□ 1.57
ATG4C-205ENST00000443289 EFCAB6Q5THR3 1501 aa24.84■■□□□ 1.57
ATG4C-205ENST00000443289 IDI1Q13907 227 aa24.83■■□□□ 1.57
ATG4C-205ENST00000443289 UBR1Q8IWV7 1749 aa24.83■■□□□ 1.57
ATG4C-205ENST00000443289 NOS1P29475 1434 aa24.82■■□□□ 1.56
ATG4C-205ENST00000443289 SLC52A1Q9NWF4 448 aa24.81■■□□□ 1.56
ATG4C-205ENST00000443289 TXNDC2Q86VQ3 553 aa24.8■■□□□ 1.56
ATG4C-205ENST00000443289 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
ATG4C-205ENST00000443289 RPRD2Q5VT52 1461 aaKnown RBP24.8■■□□□ 1.56
ATG4C-205ENST00000443289 ARHGAP23Q9P227 1491 aa24.79■■□□□ 1.56
ATG4C-205ENST00000443289 RRBP1Q9P2E9 1410 aaKnown RBP24.78■■□□□ 1.56
ATG4C-205ENST00000443289 SLIT1O75093 1534 aa24.78■■□□□ 1.56
ATG4C-205ENST00000443289 LTKP29376 864 aa24.78■■□□□ 1.56
ATG4C-205ENST00000443289 SCAF11Q99590 1463 aaKnown RBP24.77■■□□□ 1.56
ATG4C-205ENST00000443289 CPS1P31327 1500 aa24.76■■□□□ 1.55
ATG4C-205ENST00000443289 UNC13BO14795 1591 aa24.76■■□□□ 1.55
ATG4C-205ENST00000443289 PIK3C2BO00750 1634 aa24.76■■□□□ 1.55
ATG4C-205ENST00000443289 IQGAP1P46940 1657 aa24.76■■□□□ 1.55
ATG4C-205ENST00000443289 TMEM2Q9UHN6 1383 aa24.76■■□□□ 1.55
ATG4C-205ENST00000443289 SYNMO15061 1565 aa24.76■■□□□ 1.55
ATG4C-205ENST00000443289 TET3O43151 1660 aa24.75■■□□□ 1.55
ATG4C-205ENST00000443289 KDM5AP29375 1690 aaKnown RBP24.73■■□□□ 1.55
ATG4C-205ENST00000443289 NUP155O75694 1391 aa24.73■■□□□ 1.55
ATG4C-205ENST00000443289 UBAP1LF5GYI3 381 aa24.73■■□□□ 1.55
ATG4C-205ENST00000443289 GCC2Q8IWJ2 1684 aa24.69■■□□□ 1.54
ATG4C-205ENST00000443289 IQGAP3Q86VI3 1631 aa24.68■■□□□ 1.54
ATG4C-205ENST00000443289 ADGRB3O60242 1522 aa24.67■■□□□ 1.54
ATG4C-205ENST00000443289 TOM1O60784 492 aa24.65■■□□□ 1.54
ATG4C-205ENST00000443289 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.54
ATG4C-205ENST00000443289 E9PCH4 1651 aa24.62■■□□□ 1.53
ATG4C-205ENST00000443289 NAIPQ13075 1403 aa24.61■■□□□ 1.53
ATG4C-205ENST00000443289 CHGAP10645 457 aaKnown RBP24.6■■□□□ 1.53
ATG4C-205ENST00000443289 LRRC7Q96NW7 1537 aa24.58■■□□□ 1.53
ATG4C-205ENST00000443289 BCANQ96GW7 911 aa24.57■■□□□ 1.52
ATG4C-205ENST00000443289 SLC26A8Q96RN1 970 aa24.57■■□□□ 1.52
ATG4C-205ENST00000443289 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.56■■□□□ 1.52
ATG4C-205ENST00000443289 STRCP1A6NGW2 1772 aa24.56■■□□□ 1.52
ATG4C-205ENST00000443289 TMEM131LA2VDJ0 1609 aa24.56■■□□□ 1.52
ATG4C-205ENST00000443289 ZFYVE9O95405 1425 aa24.55■■□□□ 1.52
ATG4C-205ENST00000443289 RIMS2Q9UQ26 1411 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms