RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 GRXCR2A6NFK2 248 aa11.02□□□□□ -0.65
AC003001.1-201ENST00000443247 SEMA3EO15041 775 aa11.02□□□□□ -0.65
AC003001.1-201ENST00000443247 KCNK17Q96T54 332 aa11.02□□□□□ -0.65
AC003001.1-201ENST00000443247 PTPREP23469 700 aa11.01□□□□□ -0.65
AC003001.1-201ENST00000443247 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
AC003001.1-201ENST00000443247 FBXW7Q969H0 707 aa11.01□□□□□ -0.65
AC003001.1-201ENST00000443247 ADAM33Q9BZ11 813 aa11.01□□□□□ -0.65
AC003001.1-201ENST00000443247 MLLT3P42568 568 aaPredicted RBP11□□□□□ -0.65
AC003001.1-201ENST00000443247 NBR1Q14596 966 aa11□□□□□ -0.65
AC003001.1-201ENST00000443247 EPAS1Q99814 870 aa11□□□□□ -0.65
AC003001.1-201ENST00000443247 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
AC003001.1-201ENST00000443247 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
AC003001.1-201ENST00000443247 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
AC003001.1-201ENST00000443247 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
AC003001.1-201ENST00000443247 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
AC003001.1-201ENST00000443247 PLA2G2EQ9NZK7 142 aa10.94□□□□□ -0.66
AC003001.1-201ENST00000443247 OSBPP22059 807 aa10.93□□□□□ -0.66
AC003001.1-201ENST00000443247 PRIM1P49642 420 aaKnown RBP10.93□□□□□ -0.66
AC003001.1-201ENST00000443247 MAP3K7O43318 606 aa10.92□□□□□ -0.66
AC003001.1-201ENST00000443247 VPS9D1Q9Y2B5 631 aa10.92□□□□□ -0.66
AC003001.1-201ENST00000443247 PPP1R3GB7ZBB8 358 aa10.91□□□□□ -0.66
AC003001.1-201ENST00000443247 C6orf132Q5T0Z8 1188 aa10.91□□□□□ -0.66
AC003001.1-201ENST00000443247 ZBED2Q9BTP6 218 aa10.91□□□□□ -0.66
AC003001.1-201ENST00000443247 KCTD12Q96CX2 325 aaKnown RBP10.9□□□□□ -0.66
AC003001.1-201ENST00000443247 TSR1Q2NL82 804 aaKnown RBP10.89□□□□□ -0.67
AC003001.1-201ENST00000443247 COL9A1P20849 921 aa10.88□□□□□ -0.67
AC003001.1-201ENST00000443247 SMYD5Q6GMV2 418 aa10.88□□□□□ -0.67
AC003001.1-201ENST00000443247 STAC3Q96MF2 364 aa10.88□□□□□ -0.67
AC003001.1-201ENST00000443247 CDHR5Q9HBB8 845 aa10.86□□□□□ -0.67
AC003001.1-201ENST00000443247 BHMG1C9JSJ3 638 aaPredicted RBP10.84□□□□□ -0.67
AC003001.1-201ENST00000443247 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
AC003001.1-201ENST00000443247 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
AC003001.1-201ENST00000443247 PROX2Q3B8N5 592 aa10.82□□□□□ -0.68
AC003001.1-201ENST00000443247 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
AC003001.1-201ENST00000443247 ONECUT3O60422 494 aaPredicted RBP10.81□□□□□ -0.68
AC003001.1-201ENST00000443247 RABGEF1Q9UJ41 708 aa10.81□□□□□ -0.68
AC003001.1-201ENST00000443247 NBPF3Q9H094 633 aa10.8□□□□□ -0.68
AC003001.1-201ENST00000443247 CERKQ8TCT0 537 aa10.79□□□□□ -0.68
AC003001.1-201ENST00000443247 TRIM6-TRIM34B2RNG4 842 aa10.78□□□□□ -0.68
AC003001.1-201ENST00000443247 MRPL50Q8N5N7 158 aaKnown RBP10.78□□□□□ -0.68
AC003001.1-201ENST00000443247 BCANQ96GW7 911 aa10.78□□□□□ -0.68
AC003001.1-201ENST00000443247 PTPN5P54829 565 aa10.77□□□□□ -0.69
AC003001.1-201ENST00000443247 KIAA1468Q9P260 1216 aa10.77□□□□□ -0.69
AC003001.1-201ENST00000443247 THSD4Q6ZMP0 1018 aa10.76□□□□□ -0.69
AC003001.1-201ENST00000443247 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
AC003001.1-201ENST00000443247 GOLGA8CPA6NN73 597 aa10.75□□□□□ -0.69
AC003001.1-201ENST00000443247 PTGDRQ13258 359 aa10.75□□□□□ -0.69
AC003001.1-201ENST00000443247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.74□□□□□ -0.69
AC003001.1-201ENST00000443247 GPIHBP1Q8IV16 184 aa10.74□□□□□ -0.69
AC003001.1-201ENST00000443247 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
AC003001.1-201ENST00000443247 FCHSD2O94868 740 aa10.73□□□□□ -0.69
AC003001.1-201ENST00000443247 PRSS12P56730 875 aa10.73□□□□□ -0.69
AC003001.1-201ENST00000443247 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
AC003001.1-201ENST00000443247 LAPTM4BQ86VI4 370 aa10.72□□□□□ -0.69
AC003001.1-201ENST00000443247 PACS2Q86VP3 889 aa10.72□□□□□ -0.69
AC003001.1-201ENST00000443247 WNT2BQ93097 391 aa10.72□□□□□ -0.69
AC003001.1-201ENST00000443247 TSKSQ9UJT2 592 aa10.72□□□□□ -0.69
AC003001.1-201ENST00000443247 PADI6Q6TGC4 694 aa10.71□□□□□ -0.69
AC003001.1-201ENST00000443247 GPR37O15354 613 aa10.7□□□□□ -0.7
AC003001.1-201ENST00000443247 RBM27Q9P2N5 1060 aaKnown RBP10.7□□□□□ -0.7
AC003001.1-201ENST00000443247 FAM198AQ9UFP1 575 aa10.69□□□□□ -0.7
AC003001.1-201ENST00000443247 HIC1Q14526 733 aa10.68□□□□□ -0.7
AC003001.1-201ENST00000443247 SEPT9Q9UHD8 586 aaPredicted RBP10.68□□□□□ -0.7
AC003001.1-201ENST00000443247 FAM98CQ17RN3 349 aaKnown RBP10.67□□□□□ -0.7
AC003001.1-201ENST00000443247 IFFO2Q5TF58 517 aa10.67□□□□□ -0.7
AC003001.1-201ENST00000443247 ZFRQ96KR1 1074 aaKnown RBP10.66□□□□□ -0.7
AC003001.1-201ENST00000443247 GNPATO15228 680 aa10.65□□□□□ -0.7
AC003001.1-201ENST00000443247 TTC13Q8NBP0 860 aa10.65□□□□□ -0.7
AC003001.1-201ENST00000443247 ANKK1Q8NFD2 765 aa10.65□□□□□ -0.7
AC003001.1-201ENST00000443247 NBPF26B4DH59 902 aa10.64□□□□□ -0.71
AC003001.1-201ENST00000443247 C3orf80F5H4A9 247 aa10.64□□□□□ -0.71
AC003001.1-201ENST00000443247 TATDN2Q93075 761 aa10.64□□□□□ -0.71
AC003001.1-201ENST00000443247 SMAPO00193 183 aa10.63□□□□□ -0.71
AC003001.1-201ENST00000443247 FECHP22830 423 aa10.63□□□□□ -0.71
AC003001.1-201ENST00000443247 PNMA3Q9UL41 463 aa10.63□□□□□ -0.71
AC003001.1-201ENST00000443247 NUDT18Q6ZVK8 323 aa10.62□□□□□ -0.71
AC003001.1-201ENST00000443247 SOWAHBA6NEL2 793 aa10.6□□□□□ -0.71
AC003001.1-201ENST00000443247 FAM161AQ3B820 660 aa10.6□□□□□ -0.71
AC003001.1-201ENST00000443247 A0A0G2JS52 829 aa10.59□□□□□ -0.71
AC003001.1-201ENST00000443247 ZC3H15Q8WU90 426 aaKnown RBP10.59□□□□□ -0.71
AC003001.1-201ENST00000443247 BCAMP50895 628 aa10.58□□□□□ -0.72
AC003001.1-201ENST00000443247 ADGRG1Q9Y653 693 aa10.58□□□□□ -0.72
AC003001.1-201ENST00000443247 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
AC003001.1-201ENST00000443247 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.57□□□□□ -0.72
AC003001.1-201ENST00000443247 RGS20O76081 388 aa10.56□□□□□ -0.72
AC003001.1-201ENST00000443247 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
AC003001.1-201ENST00000443247 EYA1Q99502 592 aa10.55□□□□□ -0.72
AC003001.1-201ENST00000443247 MAP2K5Q13163 448 aa10.54□□□□□ -0.72
AC003001.1-201ENST00000443247 SAMD7Q7Z3H4 446 aa10.54□□□□□ -0.72
AC003001.1-201ENST00000443247 ZMYND10O75800 440 aa10.53□□□□□ -0.72
AC003001.1-201ENST00000443247 ITGBL1O95965 494 aaPredicted RBP10.53□□□□□ -0.72
AC003001.1-201ENST00000443247 HDGFP51858 240 aaKnown RBP10.53□□□□□ -0.72
AC003001.1-201ENST00000443247 TSR3Q9UJK0 312 aaKnown RBP10.53□□□□□ -0.72
AC003001.1-201ENST00000443247 NYAP1Q6ZVC0 841 aa10.52□□□□□ -0.73
AC003001.1-201ENST00000443247 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
AC003001.1-201ENST00000443247 OATP04181 439 aa10.51□□□□□ -0.73
AC003001.1-201ENST00000443247 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
AC003001.1-201ENST00000443247 METTL3Q86U44 580 aaKnown RBP10.51□□□□□ -0.73
AC003001.1-201ENST00000443247 WBP1LQ9NX94 342 aa10.51□□□□□ -0.73
AC003001.1-201ENST00000443247 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms