RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 AKNAQ7Z591 1439 aa14.06□□□□□ -0.16
CALD1-210ENST00000443197 CFAP43Q8NDM7 1665 aa14.03□□□□□ -0.16
CALD1-210ENST00000443197 CCDC184Q52MB2 194 aa14.03□□□□□ -0.16
CALD1-210ENST00000443197 MAGI3Q5TCQ9 1506 aa14.02□□□□□ -0.16
CALD1-210ENST00000443197 RALBP1Q15311 655 aa14.01□□□□□ -0.17
CALD1-210ENST00000443197 CFAP70Q5T0N1 1121 aa14.01□□□□□ -0.17
CALD1-210ENST00000443197 TMEM132EQ6IEE7 984 aa14.01□□□□□ -0.17
CALD1-210ENST00000443197 C14orf37Q86TY3 774 aa14.01□□□□□ -0.17
CALD1-210ENST00000443197 MORC1Q86VD1 984 aa14.01□□□□□ -0.17
CALD1-210ENST00000443197 U2SURPO15042 1029 aaKnown RBP14.01□□□□□ -0.17
CALD1-210ENST00000443197 KIF14Q15058 1648 aa14.01□□□□□ -0.17
CALD1-210ENST00000443197 NUP160Q12769 1436 aa14.01□□□□□ -0.17
CALD1-210ENST00000443197 SAMD9Q5K651 1589 aa14□□□□□ -0.17
CALD1-210ENST00000443197 SOX12O15370 315 aa14□□□□□ -0.17
CALD1-210ENST00000443197 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
CALD1-210ENST00000443197 CFAP53Q96M91 514 aa13.99□□□□□ -0.17
CALD1-210ENST00000443197 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
CALD1-210ENST00000443197 ZBTB7CA1YPR0 619 aa13.98□□□□□ -0.17
CALD1-210ENST00000443197 CEP170Q5SW79 1584 aa13.98□□□□□ -0.17
CALD1-210ENST00000443197 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
CALD1-210ENST00000443197 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
CALD1-210ENST00000443197 CNTLNQ9NXG0 1405 aa13.96□□□□□ -0.17
CALD1-210ENST00000443197 PLEKHH2Q8IVE3 1493 aa13.96□□□□□ -0.17
CALD1-210ENST00000443197 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.95□□□□□ -0.18
CALD1-210ENST00000443197 PPP4R2Q9NY27 417 aa13.94□□□□□ -0.18
CALD1-210ENST00000443197 MYBBP1AQ9BQG0 1328 aaKnown RBP13.94□□□□□ -0.18
CALD1-210ENST00000443197 EIF3AQ14152 1382 aaKnown RBP13.94□□□□□ -0.18
CALD1-210ENST00000443197 VGFO15240 615 aaPredicted RBP13.93□□□□□ -0.18
CALD1-210ENST00000443197 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
CALD1-210ENST00000443197 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
CALD1-210ENST00000443197 FRAT1Q92837 279 aaPredicted RBP13.92□□□□□ -0.18
CALD1-210ENST00000443197 TCOF1Q13428 1488 aaKnown RBP13.92□□□□□ -0.18
CALD1-210ENST00000443197 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
CALD1-210ENST00000443197 CD109Q6YHK3 1445 aa13.91□□□□□ -0.18
CALD1-210ENST00000443197 U2AF1L5P0DN76 240 aaPredicted RBP13.9□□□□□ -0.19
CALD1-210ENST00000443197 U2AF1Q01081 240 aaKnown RBP eCLIP13.9□□□□□ -0.19
CALD1-210ENST00000443197 ANP32AP39687 249 aaKnown RBP13.89□□□□□ -0.19
CALD1-210ENST00000443197 NUDCQ9Y266 331 aa13.89□□□□□ -0.19
CALD1-210ENST00000443197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.89□□□□□ -0.19
CALD1-210ENST00000443197 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
CALD1-210ENST00000443197 MAPK8IP3Q9UPT6 1336 aa13.89□□□□□ -0.19
CALD1-210ENST00000443197 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
CALD1-210ENST00000443197 ADGRL1O94910 1474 aa13.88□□□□□ -0.19
CALD1-210ENST00000443197 SYCP2Q9BX26 1530 aa13.88□□□□□ -0.19
CALD1-210ENST00000443197 RCAN3Q9UKA8 241 aa13.88□□□□□ -0.19
CALD1-210ENST00000443197 FANCAO15360 1455 aa13.87□□□□□ -0.19
CALD1-210ENST00000443197 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
CALD1-210ENST00000443197 RRP7AQ9Y3A4 280 aaKnown RBP13.87□□□□□ -0.19
CALD1-210ENST00000443197 TRAPPC8Q9Y2L5 1435 aa13.87□□□□□ -0.19
CALD1-210ENST00000443197 HDGFL2Q7Z4V5 671 aaPredicted RBP13.86□□□□□ -0.19
CALD1-210ENST00000443197 CENPJQ9HC77 1338 aaPredicted RBP13.86□□□□□ -0.19
CALD1-210ENST00000443197 PLCH2O75038 1416 aa13.85□□□□□ -0.19
CALD1-210ENST00000443197 ZBED9Q6R2W3 1325 aa13.85□□□□□ -0.19
CALD1-210ENST00000443197 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
CALD1-210ENST00000443197 ASXL2Q76L83 1435 aa13.84□□□□□ -0.19
CALD1-210ENST00000443197 PLIN1O60240 522 aa13.83□□□□□ -0.2
CALD1-210ENST00000443197 RTL5Q5HYW3 569 aaPredicted RBP13.83□□□□□ -0.2
CALD1-210ENST00000443197 SLC12A5Q9H2X9 1139 aa13.83□□□□□ -0.2
CALD1-210ENST00000443197 TERF2IPQ9NYB0 399 aa13.82□□□□□ -0.2
CALD1-210ENST00000443197 EVC2Q86UK5 1308 aa13.81□□□□□ -0.2
CALD1-210ENST00000443197 APAF1O14727 1248 aa13.81□□□□□ -0.2
CALD1-210ENST00000443197 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
CALD1-210ENST00000443197 ERBINQ96RT1 1412 aa13.81□□□□□ -0.2
CALD1-210ENST00000443197 RGS3P49796 1198 aa13.81□□□□□ -0.2
CALD1-210ENST00000443197 ITSN2Q9NZM3 1697 aa13.8□□□□□ -0.2
CALD1-210ENST00000443197 FBXO31Q5XUX0 539 aaPredicted RBP13.8□□□□□ -0.2
CALD1-210ENST00000443197 STAC3Q96MF2 364 aa13.79□□□□□ -0.2
CALD1-210ENST00000443197 ADAMTS8Q9UP79 889 aa13.79□□□□□ -0.2
CALD1-210ENST00000443197 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
CALD1-210ENST00000443197 PZPP20742 1482 aa13.79□□□□□ -0.2
CALD1-210ENST00000443197 KDM6BO15054 1643 aa13.78□□□□□ -0.2
CALD1-210ENST00000443197 DNMT1P26358 1616 aaKnown RBP13.78□□□□□ -0.2
CALD1-210ENST00000443197 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
CALD1-210ENST00000443197 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
CALD1-210ENST00000443197 PNISRQ8TF01 805 aaKnown RBP13.78□□□□□ -0.2
CALD1-210ENST00000443197 GGNBP2Q9H3C7 697 aa13.78□□□□□ -0.2
CALD1-210ENST00000443197 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
CALD1-210ENST00000443197 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
CALD1-210ENST00000443197 FTSJ3Q8IY81 847 aaKnown RBP13.78□□□□□ -0.2
CALD1-210ENST00000443197 ABCC2Q92887 1545 aa13.77□□□□□ -0.2
CALD1-210ENST00000443197 IDI1Q13907 227 aa13.76□□□□□ -0.21
CALD1-210ENST00000443197 RBM19Q9Y4C8 960 aaKnown RBP13.76□□□□□ -0.21
CALD1-210ENST00000443197 CGNL1Q0VF96 1302 aa13.76□□□□□ -0.21
CALD1-210ENST00000443197 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
CALD1-210ENST00000443197 PRAM1Q96QH2 718 aa13.76□□□□□ -0.21
CALD1-210ENST00000443197 DHX29Q7Z478 1369 aaKnown RBP13.76□□□□□ -0.21
CALD1-210ENST00000443197 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
CALD1-210ENST00000443197 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
CALD1-210ENST00000443197 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
CALD1-210ENST00000443197 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
CALD1-210ENST00000443197 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
CALD1-210ENST00000443197 NBR1Q14596 966 aa13.73□□□□□ -0.21
CALD1-210ENST00000443197 EXOC6Q8TAG9 804 aa13.73□□□□□ -0.21
CALD1-210ENST00000443197 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
CALD1-210ENST00000443197 SLC52A1Q9NWF4 448 aa13.72□□□□□ -0.21
CALD1-210ENST00000443197 PDE3BQ13370 1112 aa13.72□□□□□ -0.21
CALD1-210ENST00000443197 TXNDC2Q86VQ3 553 aa13.72□□□□□ -0.21
CALD1-210ENST00000443197 ABCA8O94911 1581 aa13.72□□□□□ -0.21
CALD1-210ENST00000443197 MTHFSP49914 203 aa13.72□□□□□ -0.21
CALD1-210ENST00000443197 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms