RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 KDM5DQ9BY66 1539 aa34.4■■■■□ 3.1
HDLBP-220ENST00000442730 EIF2AK4Q9P2K8 1649 aaKnown RBP34.39■■■■□ 3.1
HDLBP-220ENST00000442730 DUOX2Q9NRD8 1548 aa34.37■■■■□ 3.09
HDLBP-220ENST00000442730 PTPRKQ15262 1439 aa34.37■■■■□ 3.09
HDLBP-220ENST00000442730 KIF15Q9NS87 1388 aa34.34■■■■□ 3.09
HDLBP-220ENST00000442730 MROH1Q8NDA8 1641 aa34.3■■■■□ 3.08
HDLBP-220ENST00000442730 MYO3AQ8NEV4 1616 aa34.3■■■■□ 3.08
HDLBP-220ENST00000442730 ERBINQ96RT1 1412 aa34.28■■■■□ 3.08
HDLBP-220ENST00000442730 WASHC2CQ9Y4E1 1318 aa34.26■■■■□ 3.07
HDLBP-220ENST00000442730 PZPP20742 1482 aa34.26■■■■□ 3.07
HDLBP-220ENST00000442730 ABCC3O15438 1527 aa34.25■■■■□ 3.07
HDLBP-220ENST00000442730 ZNF142P52746 1687 aaPredicted RBP34.25■■■■□ 3.07
HDLBP-220ENST00000442730 ZC3H13Q5T200 1668 aaKnown RBP34.25■■■■□ 3.07
HDLBP-220ENST00000442730 FAM50AQ14320 339 aaKnown RBP34.24■■■■□ 3.07
HDLBP-220ENST00000442730 RRP7BPQ9NSQ0 103 aa34.23■■■■□ 3.07
HDLBP-220ENST00000442730 STRCQ7RTU9 1775 aa34.23■■■■□ 3.07
HDLBP-220ENST00000442730 ANKRD30AQ9BXX3 1397 aa34.22■■■■□ 3.07
HDLBP-220ENST00000442730 ADGRL2O95490 1459 aa34.21■■■■□ 3.07
HDLBP-220ENST00000442730 CEP170BQ9Y4F5 1589 aaPredicted RBP34.2■■■■□ 3.07
HDLBP-220ENST00000442730 NCOA1Q15788 1441 aa34.2■■■■□ 3.06
HDLBP-220ENST00000442730 PRDM15P57071 1507 aaPredicted RBP34.2■■■■□ 3.06
HDLBP-220ENST00000442730 CHIC2Q9UKJ5 165 aa34.19■■■■□ 3.06
HDLBP-220ENST00000442730 DEPDC5O75140 1603 aa34.16■■■■□ 3.06
HDLBP-220ENST00000442730 FBXO31Q5XUX0 539 aaPredicted RBP34.14■■■■□ 3.06
HDLBP-220ENST00000442730 PPARGC1BQ86YN6 1023 aaKnown RBP34.14■■■■□ 3.06
HDLBP-220ENST00000442730 CAMSAP1Q5T5Y3 1602 aa34.14■■■■□ 3.06
HDLBP-220ENST00000442730 TNRQ92752 1358 aa34.13■■■■□ 3.05
HDLBP-220ENST00000442730 CEP152O94986 1710 aa34.13■■■■□ 3.05
HDLBP-220ENST00000442730 A2ML1A8K2U0 1454 aa34.11■■■■□ 3.05
HDLBP-220ENST00000442730 DMRT2Q9Y5R5 561 aa34.06■■■■□ 3.04
HDLBP-220ENST00000442730 PLA2R1Q13018 1463 aa34.06■■■■□ 3.04
HDLBP-220ENST00000442730 SPATA31D1Q6ZQQ2 1576 aa34.06■■■■□ 3.04
HDLBP-220ENST00000442730 PTPRTO14522 1441 aa34.04■■■■□ 3.04
HDLBP-220ENST00000442730 ERVK-7P63135 1459 aa34.03■■■■□ 3.04
HDLBP-220ENST00000442730 VWDEQ8N2E2 1590 aa34.02■■■■□ 3.04
HDLBP-220ENST00000442730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.02■■■■□ 3.04
HDLBP-220ENST00000442730 NLRP1Q9C000 1473 aa34.01■■■■□ 3.04
HDLBP-220ENST00000442730 ANKRD50Q9ULJ7 1429 aa34■■■■□ 3.03
HDLBP-220ENST00000442730 ARHGAP31Q2M1Z3 1444 aa33.99■■■■□ 3.03
HDLBP-220ENST00000442730 ILDR1Q86SU0 546 aaPredicted RBP33.99■■■■□ 3.03
HDLBP-220ENST00000442730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.98■■■■□ 3.032e-9■■□□□ 12.8
HDLBP-220ENST00000442730 LMTK2Q8IWU2 1503 aa33.98■■■■□ 3.03
HDLBP-220ENST00000442730 ROCK1Q13464 1354 aa33.98■■■■□ 3.03
HDLBP-220ENST00000442730 KANK1Q14678 1352 aa33.98■■■■□ 3.03
HDLBP-220ENST00000442730 NCKAP5LQ9HCH0 1330 aa33.93■■■■□ 3.02
HDLBP-220ENST00000442730 RRBP1Q9P2E9 1410 aaKnown RBP33.93■■■■□ 3.02
HDLBP-220ENST00000442730 UGGT1Q9NYU2 1555 aa33.9■■■■□ 3.02
HDLBP-220ENST00000442730 PKD2Q13563 968 aa33.9■■■■□ 3.02
HDLBP-220ENST00000442730 EFCAB6Q5THR3 1501 aa33.89■■■■□ 3.02
HDLBP-220ENST00000442730 UNC13BO14795 1591 aa33.86■■■■□ 3.01
HDLBP-220ENST00000442730 ITGAEP38570 1179 aa33.86■■■■□ 3.01
HDLBP-220ENST00000442730 POLR1AO95602 1720 aaPredicted RBP33.84■■■■□ 3.01
HDLBP-220ENST00000442730 NEURL4Q96JN8 1562 aa33.84■■■■□ 3.01
HDLBP-220ENST00000442730 CERKQ8TCT0 537 aa33.82■■■■□ 3
HDLBP-220ENST00000442730 FBXO41Q8TF61 875 aa33.82■■■■□ 3
HDLBP-220ENST00000442730 CFAP65Q6ZU64 1925 aaKnown RBP33.82■■■■□ 3
HDLBP-220ENST00000442730 THEMISQ8N1K5 641 aaPredicted RBP33.81■■■■□ 3
HDLBP-220ENST00000442730 LTBP4Q8N2S1 1624 aa33.79■■■■□ 3
HDLBP-220ENST00000442730 UBR1Q8IWV7 1749 aa33.79■■■■□ 3
HDLBP-220ENST00000442730 TET3O43151 1660 aa33.77■■■■□ 3
HDLBP-220ENST00000442730 SYNMO15061 1565 aa33.76■■■□□ 2.99
HDLBP-220ENST00000442730 NOS1P29475 1434 aa33.74■■■□□ 2.99
HDLBP-220ENST00000442730 RPRD2Q5VT52 1461 aaKnown RBP33.74■■■□□ 2.99
HDLBP-220ENST00000442730 PIK3C2BO00750 1634 aa33.72■■■□□ 2.99
HDLBP-220ENST00000442730 IQGAP3Q86VI3 1631 aa33.71■■■□□ 2.99
HDLBP-220ENST00000442730 GCC2Q8IWJ2 1684 aa33.71■■■□□ 2.99
HDLBP-220ENST00000442730 ANKLE2Q86XL3 938 aa33.71■■■□□ 2.99
HDLBP-220ENST00000442730 MED14O60244 1454 aa33.7■■■□□ 2.99
HDLBP-220ENST00000442730 ZNF335Q9H4Z2 1342 aaPredicted RBP33.68■■■□□ 2.98
HDLBP-220ENST00000442730 SLIT1O75093 1534 aa33.66■■■□□ 2.98
HDLBP-220ENST00000442730 NPHP4O75161 1426 aaPredicted RBP33.66■■■□□ 2.98
HDLBP-220ENST00000442730 ARHGAP23Q9P227 1491 aa33.66■■■□□ 2.98
HDLBP-220ENST00000442730 KDM5AP29375 1690 aaKnown RBP33.65■■■□□ 2.98
HDLBP-220ENST00000442730 IQGAP1P46940 1657 aa33.64■■■□□ 2.98
HDLBP-220ENST00000442730 E9PCH4 1651 aa33.62■■■□□ 2.97
HDLBP-220ENST00000442730 NUP155O75694 1391 aa33.61■■■□□ 2.97
HDLBP-220ENST00000442730 IDI1Q13907 227 aa33.61■■■□□ 2.97
HDLBP-220ENST00000442730 SCAF11Q99590 1463 aaKnown RBP33.61■■■□□ 2.97
HDLBP-220ENST00000442730 NAIPQ13075 1403 aa33.61■■■□□ 2.97
HDLBP-220ENST00000442730 ADGRB3O60242 1522 aa33.6■■■□□ 2.97
HDLBP-220ENST00000442730 IQSEC2Q5JU85 1478 aa33.6■■■□□ 2.97
HDLBP-220ENST00000442730 TMEM2Q9UHN6 1383 aa33.57■■■□□ 2.96
HDLBP-220ENST00000442730 SLC52A1Q9NWF4 448 aa33.55■■■□□ 2.96
HDLBP-220ENST00000442730 HFM1A2PYH4 1435 aa33.54■■■□□ 2.96
HDLBP-220ENST00000442730 STAG3Q9UJ98 1225 aa33.53■■■□□ 2.96
HDLBP-220ENST00000442730 LTKP29376 864 aa33.52■■■□□ 2.96
HDLBP-220ENST00000442730 TXNDC2Q86VQ3 553 aa33.49■■■□□ 2.95
HDLBP-220ENST00000442730 CPS1P31327 1500 aa33.48■■■□□ 2.95
HDLBP-220ENST00000442730 EID1Q9Y6B2 187 aa33.46■■■□□ 2.95
HDLBP-220ENST00000442730 TMEM131LA2VDJ0 1609 aa33.45■■■□□ 2.95
HDLBP-220ENST00000442730 MYO5BQ9ULV0 1848 aa33.4■■■□□ 2.94
HDLBP-220ENST00000442730 ZFYVE9O95405 1425 aa33.39■■■□□ 2.94
HDLBP-220ENST00000442730 STRCP1A6NGW2 1772 aa33.38■■■□□ 2.93
HDLBP-220ENST00000442730 SPHKAPQ2M3C7 1700 aa33.38■■■□□ 2.93
HDLBP-220ENST00000442730 RIMS2Q9UQ26 1411 aa33.33■■■□□ 2.93
HDLBP-220ENST00000442730 TRPM2O94759 1503 aa33.29■■■□□ 2.92
HDLBP-220ENST00000442730 LRRC7Q96NW7 1537 aa33.28■■■□□ 2.92
HDLBP-220ENST00000442730 CHGAP10645 457 aaKnown RBP33.27■■■□□ 2.92
HDLBP-220ENST00000442730 UBAP1LF5GYI3 381 aa33.26■■■□□ 2.91
HDLBP-220ENST00000442730 TRIM52Q96A61 297 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms