RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 ANKRD50Q9ULJ7 1429 aa17.78■□□□□ 0.44
SLC48A1-201ENST00000442218 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
SLC48A1-201ENST00000442218 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.44
SLC48A1-201ENST00000442218 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
SLC48A1-201ENST00000442218 SKAP1Q86WV1 359 aa17.75■□□□□ 0.43
SLC48A1-201ENST00000442218 ARHGEF5Q12774 1597 aa17.75■□□□□ 0.43
SLC48A1-201ENST00000442218 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
SLC48A1-201ENST00000442218 PLCH2O75038 1416 aa17.74■□□□□ 0.43
SLC48A1-201ENST00000442218 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
SLC48A1-201ENST00000442218 SPATA31E1Q6ZUB1 1445 aa17.74■□□□□ 0.43
SLC48A1-201ENST00000442218 WDR7Q9Y4E6 1490 aa17.73■□□□□ 0.43
SLC48A1-201ENST00000442218 ARHGEF12Q9NZN5 1544 aa17.73■□□□□ 0.43
SLC48A1-201ENST00000442218 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
SLC48A1-201ENST00000442218 DHX29Q7Z478 1369 aaKnown RBP17.72■□□□□ 0.43
SLC48A1-201ENST00000442218 KIF15Q9NS87 1388 aa17.72■□□□□ 0.43
SLC48A1-201ENST00000442218 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
SLC48A1-201ENST00000442218 EFCAB2Q5VUJ9 269 aa17.71■□□□□ 0.43
SLC48A1-201ENST00000442218 ASXL2Q76L83 1435 aa17.71■□□□□ 0.42
SLC48A1-201ENST00000442218 KIAA1107Q9UPP5 1409 aa17.71■□□□□ 0.42
SLC48A1-201ENST00000442218 CC2D1BQ5T0F9 858 aaKnown RBP17.7■□□□□ 0.42
SLC48A1-201ENST00000442218 RSPH4AQ5TD94 716 aa17.69■□□□□ 0.42
SLC48A1-201ENST00000442218 PNISRQ8TF01 805 aaKnown RBP17.69■□□□□ 0.42
SLC48A1-201ENST00000442218 PLIN1O60240 522 aa17.68■□□□□ 0.42
SLC48A1-201ENST00000442218 NPM1P06748 294 aaKnown RBP eCLIP17.67■□□□□ 0.42
SLC48A1-201ENST00000442218 EXOC6Q8TAG9 804 aa17.67■□□□□ 0.42
SLC48A1-201ENST00000442218 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
SLC48A1-201ENST00000442218 BCORL1Q5H9F3 1711 aa17.66■□□□□ 0.42
SLC48A1-201ENST00000442218 TRAPPC8Q9Y2L5 1435 aa17.65■□□□□ 0.42
SLC48A1-201ENST00000442218 PLEKHH2Q8IVE3 1493 aa17.65■□□□□ 0.42
SLC48A1-201ENST00000442218 NOP58Q9Y2X3 529 aaKnown RBP17.64■□□□□ 0.41
SLC48A1-201ENST00000442218 DEKP35659 375 aaKnown RBP17.64■□□□□ 0.41
SLC48A1-201ENST00000442218 ABCC1P33527 1531 aa17.63■□□□□ 0.41
SLC48A1-201ENST00000442218 AFAP1Q8N556 730 aa17.63■□□□□ 0.41
SLC48A1-201ENST00000442218 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
SLC48A1-201ENST00000442218 ERICH6BQ5W0A0 696 aa17.61■□□□□ 0.41
SLC48A1-201ENST00000442218 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
SLC48A1-201ENST00000442218 MAST1Q9Y2H9 1570 aa17.61■□□□□ 0.41
SLC48A1-201ENST00000442218 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
SLC48A1-201ENST00000442218 FANCAO15360 1455 aa17.59■□□□□ 0.41
SLC48A1-201ENST00000442218 ROCK2O75116 1388 aaKnown RBP17.59■□□□□ 0.41
SLC48A1-201ENST00000442218 SMG6Q86US8 1419 aaKnown RBP17.59■□□□□ 0.41
SLC48A1-201ENST00000442218 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
SLC48A1-201ENST00000442218 MYT1LQ9UL68 1186 aa17.57■□□□□ 0.4
SLC48A1-201ENST00000442218 LAS1LQ9Y4W2 734 aaKnown RBP17.57■□□□□ 0.4
SLC48A1-201ENST00000442218 ANP32AP39687 249 aaKnown RBP17.56■□□□□ 0.4
SLC48A1-201ENST00000442218 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
SLC48A1-201ENST00000442218 PLXNC1O60486 1568 aa17.55■□□□□ 0.4
SLC48A1-201ENST00000442218 RCAN3Q9UKA8 241 aa17.54■□□□□ 0.4
SLC48A1-201ENST00000442218 SCAPERQ9BY12 1400 aa17.54■□□□□ 0.4
SLC48A1-201ENST00000442218 KDM5DQ9BY66 1539 aa17.54■□□□□ 0.4
SLC48A1-201ENST00000442218 ADGRL1O94910 1474 aa17.53■□□□□ 0.4
SLC48A1-201ENST00000442218 RRP1P56182 461 aaKnown RBP17.53■□□□□ 0.4
SLC48A1-201ENST00000442218 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
SLC48A1-201ENST00000442218 MYBBP1AQ9BQG0 1328 aaKnown RBP17.52■□□□□ 0.39
SLC48A1-201ENST00000442218 RIMBP3CA6NJZ7 1639 aa17.51■□□□□ 0.39
SLC48A1-201ENST00000442218 RIMBP3BA6NNM3 1639 aa17.51■□□□□ 0.39
SLC48A1-201ENST00000442218 RIMBP3Q9UFD9 1639 aa17.51■□□□□ 0.39
SLC48A1-201ENST00000442218 DUOX2Q9NRD8 1548 aa17.51■□□□□ 0.39
SLC48A1-201ENST00000442218 FAM135AQ9P2D6 1515 aa17.51■□□□□ 0.39
SLC48A1-201ENST00000442218 CD109Q6YHK3 1445 aa17.51■□□□□ 0.39
SLC48A1-201ENST00000442218 PANK3Q9H999 370 aa17.5■□□□□ 0.39
SLC48A1-201ENST00000442218 ZFYVE16Q7Z3T8 1539 aa17.49■□□□□ 0.39
SLC48A1-201ENST00000442218 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
SLC48A1-201ENST00000442218 CCDC144AA2RUR9 1427 aa17.48■□□□□ 0.39
SLC48A1-201ENST00000442218 KDM5CP41229 1560 aa17.48■□□□□ 0.39
SLC48A1-201ENST00000442218 UNC13BO14795 1591 aa17.47■□□□□ 0.39
SLC48A1-201ENST00000442218 C20orf194Q5TEA3 1177 aa17.47■□□□□ 0.39
SLC48A1-201ENST00000442218 PLA2R1Q13018 1463 aa17.47■□□□□ 0.39
SLC48A1-201ENST00000442218 RTEL1-TNFRSF6BF6WH68 1400 aa17.46■□□□□ 0.39
SLC48A1-201ENST00000442218 ERBINQ96RT1 1412 aa17.46■□□□□ 0.39
SLC48A1-201ENST00000442218 DISP3Q9P2K9 1392 aa17.45■□□□□ 0.38
SLC48A1-201ENST00000442218 SLC4A3P48751 1232 aa17.45■□□□□ 0.38
SLC48A1-201ENST00000442218 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
SLC48A1-201ENST00000442218 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
SLC48A1-201ENST00000442218 CRBNQ96SW2 442 aa17.45■□□□□ 0.38
SLC48A1-201ENST00000442218 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
SLC48A1-201ENST00000442218 RALBP1Q15311 655 aa17.44■□□□□ 0.38
SLC48A1-201ENST00000442218 KTN1Q86UP2 1357 aaKnown RBP17.44■□□□□ 0.38
SLC48A1-201ENST00000442218 INO80Q9ULG1 1556 aaPredicted RBP17.43■□□□□ 0.38
SLC48A1-201ENST00000442218 RTL5Q5HYW3 569 aaPredicted RBP17.43■□□□□ 0.38
SLC48A1-201ENST00000442218 RTN4Q9NQC3 1192 aaKnown RBP17.43■□□□□ 0.38
SLC48A1-201ENST00000442218 PDE4AP27815 886 aa17.42■□□□□ 0.38
SLC48A1-201ENST00000442218 RALGAPBQ86X10 1494 aa17.42■□□□□ 0.38
SLC48A1-201ENST00000442218 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
SLC48A1-201ENST00000442218 CCDC146Q8IYE0 955 aa17.41■□□□□ 0.38
SLC48A1-201ENST00000442218 MAGI2Q86UL8 1455 aa17.4■□□□□ 0.38
SLC48A1-201ENST00000442218 ADAMTS8Q9UP79 889 aa17.4■□□□□ 0.38
SLC48A1-201ENST00000442218 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
SLC48A1-201ENST00000442218 PER1O15534 1290 aaPredicted RBP17.39■□□□□ 0.38
SLC48A1-201ENST00000442218 TESK2Q96S53 571 aa17.39■□□□□ 0.38
SLC48A1-201ENST00000442218 KIF3BO15066 747 aa17.39■□□□□ 0.37
SLC48A1-201ENST00000442218 LRPPRCP42704 1394 aaKnown RBP17.38■□□□□ 0.37
SLC48A1-201ENST00000442218 RAPGEF3O95398 923 aa17.38■□□□□ 0.37
SLC48A1-201ENST00000442218 UHRF1BP1Q6BDS2 1440 aa17.38■□□□□ 0.37
SLC48A1-201ENST00000442218 A2MP01023 1474 aa17.38■□□□□ 0.37
SLC48A1-201ENST00000442218 KIDINS220Q9ULH0 1771 aa17.38■□□□□ 0.37
SLC48A1-201ENST00000442218 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
SLC48A1-201ENST00000442218 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
SLC48A1-201ENST00000442218 POGZQ7Z3K3 1410 aa17.36■□□□□ 0.37
SLC48A1-201ENST00000442218 POLR1AO95602 1720 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms