RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
ERGIC3-208ENST00000442139 ESF1Q9H501 851 aaKnown RBP18.78■□□□□ 0.6
ERGIC3-208ENST00000442139 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.6
ERGIC3-208ENST00000442139 KIF3BO15066 747 aa18.77■□□□□ 0.6
ERGIC3-208ENST00000442139 ITGAEP38570 1179 aa18.77■□□□□ 0.6
ERGIC3-208ENST00000442139 PRDM15P57071 1507 aaPredicted RBP18.76■□□□□ 0.59
ERGIC3-208ENST00000442139 KDM5DQ9BY66 1539 aa18.75■□□□□ 0.59
ERGIC3-208ENST00000442139 CLTCQ00610 1675 aaKnown RBP18.75■□□□□ 0.59
ERGIC3-208ENST00000442139 SETD1BQ9UPS6 1966 aaKnown RBP18.75■□□□□ 0.59
ERGIC3-208ENST00000442139 HFM1A2PYH4 1435 aa18.74■□□□□ 0.59
ERGIC3-208ENST00000442139 UNC13BO14795 1591 aa18.73■□□□□ 0.59
ERGIC3-208ENST00000442139 KANK1Q14678 1352 aa18.73■□□□□ 0.59
ERGIC3-208ENST00000442139 KDM4FA0A1W2PPD8 638 aa18.73■□□□□ 0.59
ERGIC3-208ENST00000442139 MLECQ14165 292 aa18.73■□□□□ 0.59
ERGIC3-208ENST00000442139 MROH1Q8NDA8 1641 aa18.72■□□□□ 0.59
ERGIC3-208ENST00000442139 GGT6Q6P531 493 aa18.72■□□□□ 0.59
ERGIC3-208ENST00000442139 C3P01024 1663 aa18.71■□□□□ 0.59
ERGIC3-208ENST00000442139 PTPRMP28827 1452 aa18.71■□□□□ 0.59
ERGIC3-208ENST00000442139 CEP152O94986 1710 aa18.7■□□□□ 0.58
ERGIC3-208ENST00000442139 NAIPQ13075 1403 aa18.69■□□□□ 0.58
ERGIC3-208ENST00000442139 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
ERGIC3-208ENST00000442139 CAMSAP1Q5T5Y3 1602 aa18.67■□□□□ 0.58
ERGIC3-208ENST00000442139 ABCC3O15438 1527 aa18.67■□□□□ 0.58
ERGIC3-208ENST00000442139 WASHC2CQ9Y4E1 1318 aa18.67■□□□□ 0.58
ERGIC3-208ENST00000442139 IQGAP3Q86VI3 1631 aa18.67■□□□□ 0.58
ERGIC3-208ENST00000442139 LMTK2Q8IWU2 1503 aa18.66■□□□□ 0.58
ERGIC3-208ENST00000442139 TET3O43151 1660 aa18.65■□□□□ 0.58
ERGIC3-208ENST00000442139 NPATQ14207 1427 aa18.64■□□□□ 0.57
ERGIC3-208ENST00000442139 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
ERGIC3-208ENST00000442139 ZMYM3Q14202 1370 aa18.63■□□□□ 0.57
ERGIC3-208ENST00000442139 PREX1Q8TCU6 1659 aa18.62■□□□□ 0.57
ERGIC3-208ENST00000442139 PZPP20742 1482 aa18.61■□□□□ 0.57
ERGIC3-208ENST00000442139 ARHGAP31Q2M1Z3 1444 aa18.61■□□□□ 0.57
ERGIC3-208ENST00000442139 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
ERGIC3-208ENST00000442139 SETD5Q9C0A6 1442 aa18.6■□□□□ 0.57
ERGIC3-208ENST00000442139 CFAP65Q6ZU64 1925 aaKnown RBP18.6■□□□□ 0.57
ERGIC3-208ENST00000442139 EFCAB6Q5THR3 1501 aa18.59■□□□□ 0.57
ERGIC3-208ENST00000442139 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
ERGIC3-208ENST00000442139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.59■□□□□ 0.57
ERGIC3-208ENST00000442139 NUP155O75694 1391 aa18.56■□□□□ 0.56
ERGIC3-208ENST00000442139 HRCP23327 699 aa18.56■□□□□ 0.56
ERGIC3-208ENST00000442139 SPATA31D1Q6ZQQ2 1576 aa18.55■□□□□ 0.56
ERGIC3-208ENST00000442139 E9PCH4 1651 aa18.54■□□□□ 0.56
ERGIC3-208ENST00000442139 ZNF142P52746 1687 aaPredicted RBP18.54■□□□□ 0.56
ERGIC3-208ENST00000442139 MYO3AQ8NEV4 1616 aa18.52■□□□□ 0.55
ERGIC3-208ENST00000442139 KDM5AP29375 1690 aaKnown RBP18.5■□□□□ 0.55
ERGIC3-208ENST00000442139 UHRF1BP1Q6BDS2 1440 aa18.5■□□□□ 0.55
ERGIC3-208ENST00000442139 ERVK-7P63135 1459 aa18.5■□□□□ 0.55
ERGIC3-208ENST00000442139 NLRP1Q9C000 1473 aa18.5■□□□□ 0.55
ERGIC3-208ENST00000442139 SPHKAPQ2M3C7 1700 aa18.49■□□□□ 0.55
ERGIC3-208ENST00000442139 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
ERGIC3-208ENST00000442139 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
ERGIC3-208ENST00000442139 TNRQ92752 1358 aa18.48■□□□□ 0.55
ERGIC3-208ENST00000442139 CEBPAP49715 358 aaPredicted RBP18.48■□□□□ 0.55
ERGIC3-208ENST00000442139 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
ERGIC3-208ENST00000442139 NOS1P29475 1434 aa18.45■□□□□ 0.54
ERGIC3-208ENST00000442139 CEP170BQ9Y4F5 1589 aaPredicted RBP18.45■□□□□ 0.54
ERGIC3-208ENST00000442139 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
ERGIC3-208ENST00000442139 A2ML1A8K2U0 1454 aa18.43■□□□□ 0.54
ERGIC3-208ENST00000442139 LMTK3Q96Q04 1460 aa18.43■□□□□ 0.54
ERGIC3-208ENST00000442139 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
ERGIC3-208ENST00000442139 PIK3C2BO00750 1634 aa18.41■□□□□ 0.54
ERGIC3-208ENST00000442139 SYNMO15061 1565 aa18.41■□□□□ 0.54
ERGIC3-208ENST00000442139 KIF1BO60333 1816 aa18.4■□□□□ 0.54
ERGIC3-208ENST00000442139 FBXO31Q5XUX0 539 aaPredicted RBP18.4■□□□□ 0.54
ERGIC3-208ENST00000442139 UBR1Q8IWV7 1749 aa18.4■□□□□ 0.54
ERGIC3-208ENST00000442139 TRPM2O94759 1503 aa18.39■□□□□ 0.54
ERGIC3-208ENST00000442139 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
ERGIC3-208ENST00000442139 PTPRTO14522 1441 aa18.39■□□□□ 0.53
ERGIC3-208ENST00000442139 UGGT1Q9NYU2 1555 aa18.38■□□□□ 0.53
ERGIC3-208ENST00000442139 PKD2Q13563 968 aa18.36■□□□□ 0.53
ERGIC3-208ENST00000442139 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
ERGIC3-208ENST00000442139 ADGRB3O60242 1522 aa18.35■□□□□ 0.53
ERGIC3-208ENST00000442139 PLA2R1Q13018 1463 aa18.35■□□□□ 0.53
ERGIC3-208ENST00000442139 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
ERGIC3-208ENST00000442139 MYO5BQ9ULV0 1848 aa18.33■□□□□ 0.53
ERGIC3-208ENST00000442139 TMEM131LA2VDJ0 1609 aa18.32■□□□□ 0.52
ERGIC3-208ENST00000442139 STAG3Q9UJ98 1225 aa18.3■□□□□ 0.52
ERGIC3-208ENST00000442139 CLTCL1P53675 1640 aa18.3■□□□□ 0.52
ERGIC3-208ENST00000442139 NEURL4Q96JN8 1562 aa18.3■□□□□ 0.52
ERGIC3-208ENST00000442139 IDI1Q13907 227 aa18.29■□□□□ 0.52
ERGIC3-208ENST00000442139 SLIT1O75093 1534 aa18.28■□□□□ 0.52
ERGIC3-208ENST00000442139 STRCQ7RTU9 1775 aa18.28■□□□□ 0.52
ERGIC3-208ENST00000442139 CCDC144AA2RUR9 1427 aa18.28■□□□□ 0.52
ERGIC3-208ENST00000442139 HDGFP51858 240 aaKnown RBP18.27■□□□□ 0.52
ERGIC3-208ENST00000442139 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
ERGIC3-208ENST00000442139 ARHGAP23Q9P227 1491 aa18.25■□□□□ 0.51
ERGIC3-208ENST00000442139 TMEM2Q9UHN6 1383 aa18.23■□□□□ 0.51
ERGIC3-208ENST00000442139 ANKLE2Q86XL3 938 aa18.23■□□□□ 0.51
ERGIC3-208ENST00000442139 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
ERGIC3-208ENST00000442139 EID1Q9Y6B2 187 aa18.22■□□□□ 0.51
ERGIC3-208ENST00000442139 HSPA2P54652 639 aa18.21■□□□□ 0.51
ERGIC3-208ENST00000442139 MED14O60244 1454 aa18.2■□□□□ 0.5
ERGIC3-208ENST00000442139 SCAF11Q99590 1463 aaKnown RBP18.2■□□□□ 0.5
ERGIC3-208ENST00000442139 ANKRD30BQ9BXX2 1392 aa18.2■□□□□ 0.5
ERGIC3-208ENST00000442139 IQGAP1P46940 1657 aa18.2■□□□□ 0.5
ERGIC3-208ENST00000442139 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.2■□□□□ 0.5
ERGIC3-208ENST00000442139 PPLO60437 1756 aa18.19■□□□□ 0.5
ERGIC3-208ENST00000442139 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
ERGIC3-208ENST00000442139 FOXD1Q16676 465 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms