RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
UBE2D4-204ENST00000440899 ZNF142P52746 1687 aaPredicted RBP18.34■□□□□ 0.53
UBE2D4-204ENST00000440899 FAM135AQ9P2D6 1515 aa18.33■□□□□ 0.53
UBE2D4-204ENST00000440899 FBXO31Q5XUX0 539 aaPredicted RBP18.33■□□□□ 0.52
UBE2D4-204ENST00000440899 LTBP4Q8N2S1 1624 aa18.33■□□□□ 0.52
UBE2D4-204ENST00000440899 A2ML1A8K2U0 1454 aa18.33■□□□□ 0.52
UBE2D4-204ENST00000440899 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
UBE2D4-204ENST00000440899 TNRQ92752 1358 aa18.31■□□□□ 0.52
UBE2D4-204ENST00000440899 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
UBE2D4-204ENST00000440899 TCOF1Q13428 1488 aaKnown RBP18.31■□□□□ 0.52
UBE2D4-204ENST00000440899 MYOM3Q5VTT5 1437 aa18.31■□□□□ 0.52
UBE2D4-204ENST00000440899 PZPP20742 1482 aa18.3■□□□□ 0.52
UBE2D4-204ENST00000440899 IQSEC2Q5JU85 1478 aa18.29■□□□□ 0.52
UBE2D4-204ENST00000440899 APLP2Q06481 763 aa18.29■□□□□ 0.52
UBE2D4-204ENST00000440899 ZNF335Q9H4Z2 1342 aaPredicted RBP18.27■□□□□ 0.52
UBE2D4-204ENST00000440899 MAST1Q9Y2H9 1570 aa18.27■□□□□ 0.52
UBE2D4-204ENST00000440899 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
UBE2D4-204ENST00000440899 THEMISQ8N1K5 641 aaPredicted RBP18.25■□□□□ 0.51
UBE2D4-204ENST00000440899 NLRP1Q9C000 1473 aa18.22■□□□□ 0.51
UBE2D4-204ENST00000440899 ANKLE2Q86XL3 938 aa18.22■□□□□ 0.51
UBE2D4-204ENST00000440899 RNF17Q9BXT8 1623 aaKnown RBP18.22■□□□□ 0.51
UBE2D4-204ENST00000440899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.2■□□□□ 0.5
UBE2D4-204ENST00000440899 ABCC3O15438 1527 aa18.19■□□□□ 0.5
UBE2D4-204ENST00000440899 DUOX2Q9NRD8 1548 aa18.19■□□□□ 0.5
UBE2D4-204ENST00000440899 EIF2AK4Q9P2K8 1649 aaKnown RBP18.19■□□□□ 0.5
UBE2D4-204ENST00000440899 UBAP1LF5GYI3 381 aa18.18■□□□□ 0.5
UBE2D4-204ENST00000440899 KIF15Q9NS87 1388 aa18.17■□□□□ 0.5
UBE2D4-204ENST00000440899 UGGT1Q9NYU2 1555 aa18.17■□□□□ 0.5
UBE2D4-204ENST00000440899 ABCC5O15440 1437 aa18.17■□□□□ 0.5
UBE2D4-204ENST00000440899 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
UBE2D4-204ENST00000440899 ZC3H13Q5T200 1668 aaKnown RBP18.16■□□□□ 0.5
UBE2D4-204ENST00000440899 SHANK2Q9UPX8 1470 aa18.16■□□□□ 0.5
UBE2D4-204ENST00000440899 PTPN23Q9H3S7 1636 aa18.15■□□□□ 0.5
UBE2D4-204ENST00000440899 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
UBE2D4-204ENST00000440899 SPATA31D1Q6ZQQ2 1576 aa18.14■□□□□ 0.49
UBE2D4-204ENST00000440899 NEURL4Q96JN8 1562 aa18.14■□□□□ 0.49
UBE2D4-204ENST00000440899 DISP3Q9P2K9 1392 aa18.14■□□□□ 0.49
UBE2D4-204ENST00000440899 ERVK-7P63135 1459 aa18.14■□□□□ 0.49
UBE2D4-204ENST00000440899 MROH1Q8NDA8 1641 aa18.13■□□□□ 0.49
UBE2D4-204ENST00000440899 POLR1AO95602 1720 aaPredicted RBP18.13■□□□□ 0.49
UBE2D4-204ENST00000440899 DAPK1P53355 1430 aa18.13■□□□□ 0.49
UBE2D4-204ENST00000440899 ERBINQ96RT1 1412 aa18.13■□□□□ 0.49
UBE2D4-204ENST00000440899 MED14O60244 1454 aa18.12■□□□□ 0.49
UBE2D4-204ENST00000440899 NPHP4O75161 1426 aaPredicted RBP18.11■□□□□ 0.49
UBE2D4-204ENST00000440899 DEPDC5O75140 1603 aa18.1■□□□□ 0.49
UBE2D4-204ENST00000440899 CPS1P31327 1500 aa18.1■□□□□ 0.49
UBE2D4-204ENST00000440899 ARHGAP31Q2M1Z3 1444 aa18.1■□□□□ 0.49
UBE2D4-204ENST00000440899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
UBE2D4-204ENST00000440899 CHIC2Q9UKJ5 165 aa18.1■□□□□ 0.49
UBE2D4-204ENST00000440899 ANKRD30AQ9BXX3 1397 aa18.09■□□□□ 0.49
UBE2D4-204ENST00000440899 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
UBE2D4-204ENST00000440899 KANK1Q14678 1352 aa18.08■□□□□ 0.49
UBE2D4-204ENST00000440899 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.48
UBE2D4-204ENST00000440899 CEP152O94986 1710 aa18.07■□□□□ 0.48
UBE2D4-204ENST00000440899 TOM1O60784 492 aa18.07■□□□□ 0.48
UBE2D4-204ENST00000440899 VWDEQ8N2E2 1590 aa18.05■□□□□ 0.48
UBE2D4-204ENST00000440899 CFAP65Q6ZU64 1925 aaKnown RBP18.04■□□□□ 0.48
UBE2D4-204ENST00000440899 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
UBE2D4-204ENST00000440899 ILDR2Q71H61 639 aa18.03■□□□□ 0.48
UBE2D4-204ENST00000440899 IQGAP1P46940 1657 aa18.03■□□□□ 0.48
UBE2D4-204ENST00000440899 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
UBE2D4-204ENST00000440899 PIP4K2BP78356 416 aa18.02■□□□□ 0.48
UBE2D4-204ENST00000440899 TXNDC2Q86VQ3 553 aa18.02■□□□□ 0.48
UBE2D4-204ENST00000440899 LTKP29376 864 aa18.01■□□□□ 0.47
UBE2D4-204ENST00000440899 EID1Q9Y6B2 187 aa18.01■□□□□ 0.47
UBE2D4-204ENST00000440899 SCAF11Q99590 1463 aaKnown RBP18.01■□□□□ 0.47
UBE2D4-204ENST00000440899 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
UBE2D4-204ENST00000440899 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
UBE2D4-204ENST00000440899 ARHGAP23Q9P227 1491 aa18■□□□□ 0.47
UBE2D4-204ENST00000440899 SLIT1O75093 1534 aa17.99■□□□□ 0.47
UBE2D4-204ENST00000440899 LMTK2Q8IWU2 1503 aa17.99■□□□□ 0.47
UBE2D4-204ENST00000440899 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
UBE2D4-204ENST00000440899 HSPA1LP34931 641 aa17.97■□□□□ 0.47
UBE2D4-204ENST00000440899 IDI1Q13907 227 aa17.97■□□□□ 0.47
UBE2D4-204ENST00000440899 TMEM2Q9UHN6 1383 aa17.96■□□□□ 0.47
UBE2D4-204ENST00000440899 LRRC7Q96NW7 1537 aa17.94■□□□□ 0.46
UBE2D4-204ENST00000440899 SOCS7O14512 581 aa17.94■□□□□ 0.46
UBE2D4-204ENST00000440899 SLC52A1Q9NWF4 448 aa17.94■□□□□ 0.46
UBE2D4-204ENST00000440899 ANKRD50Q9ULJ7 1429 aa17.94■□□□□ 0.46
UBE2D4-204ENST00000440899 NOS1P29475 1434 aa17.93■□□□□ 0.46
UBE2D4-204ENST00000440899 PIK3C2BO00750 1634 aa17.93■□□□□ 0.46
UBE2D4-204ENST00000440899 EFCAB6Q5THR3 1501 aa17.92■□□□□ 0.46
UBE2D4-204ENST00000440899 STRCP1A6NGW2 1772 aa17.91■□□□□ 0.46
UBE2D4-204ENST00000440899 SYNMO15061 1565 aa17.9■□□□□ 0.46
UBE2D4-204ENST00000440899 KDM5AP29375 1690 aaKnown RBP17.9■□□□□ 0.46
UBE2D4-204ENST00000440899 ALKQ9UM73 1620 aa17.89■□□□□ 0.45
UBE2D4-204ENST00000440899 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
UBE2D4-204ENST00000440899 SLC26A8Q96RN1 970 aa17.86■□□□□ 0.45
UBE2D4-204ENST00000440899 ROCK1Q13464 1354 aa17.86■□□□□ 0.45
UBE2D4-204ENST00000440899 ADGRB3O60242 1522 aa17.85■□□□□ 0.45
UBE2D4-204ENST00000440899 KCNA6P17658 529 aa17.85■□□□□ 0.45
UBE2D4-204ENST00000440899 HDGFP51858 240 aaKnown RBP17.83■□□□□ 0.44
UBE2D4-204ENST00000440899 TET3O43151 1660 aa17.83■□□□□ 0.44
UBE2D4-204ENST00000440899 BCANQ96GW7 911 aa17.82■□□□□ 0.44
UBE2D4-204ENST00000440899 PROSER2Q86WR7 435 aaPredicted RBP17.81■□□□□ 0.44
UBE2D4-204ENST00000440899 TMEM94Q12767 1356 aa17.8■□□□□ 0.44
UBE2D4-204ENST00000440899 MED1Q15648 1581 aaPredicted RBP17.8■□□□□ 0.44
UBE2D4-204ENST00000440899 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
UBE2D4-204ENST00000440899 ITGAEP38570 1179 aa17.79■□□□□ 0.44
UBE2D4-204ENST00000440899 UNC13BO14795 1591 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms