RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
AC009404.1-202ENST00000439955 PCGF6Q9BYE7 350 aa17.85■□□□□ 0.45
AC009404.1-202ENST00000439955 A2MP01023 1474 aa17.84■□□□□ 0.45
AC009404.1-202ENST00000439955 CCNB3Q8WWL7 1395 aa17.84■□□□□ 0.45
AC009404.1-202ENST00000439955 CDC42BPAQ5VT25 1732 aa17.84■□□□□ 0.45
AC009404.1-202ENST00000439955 ATP7AQ04656 1500 aa17.83■□□□□ 0.45
AC009404.1-202ENST00000439955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.83■□□□□ 0.45
AC009404.1-202ENST00000439955 SHANK2Q9UPX8 1470 aa17.82■□□□□ 0.44
AC009404.1-202ENST00000439955 FGD6Q6ZV73 1430 aa17.82■□□□□ 0.44
AC009404.1-202ENST00000439955 MIA2Q96PC5 1412 aa17.82■□□□□ 0.44
AC009404.1-202ENST00000439955 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
AC009404.1-202ENST00000439955 DNMT1P26358 1616 aaKnown RBP17.81■□□□□ 0.44
AC009404.1-202ENST00000439955 PLXNC1O60486 1568 aa17.81■□□□□ 0.44
AC009404.1-202ENST00000439955 CPS1P31327 1500 aa17.81■□□□□ 0.44
AC009404.1-202ENST00000439955 FBXO31Q5XUX0 539 aaPredicted RBP17.8■□□□□ 0.44
AC009404.1-202ENST00000439955 GPATCH8Q9UKJ3 1502 aaKnown RBP17.79■□□□□ 0.44
AC009404.1-202ENST00000439955 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
AC009404.1-202ENST00000439955 INO80Q9ULG1 1556 aaPredicted RBP17.78■□□□□ 0.44
AC009404.1-202ENST00000439955 PTPN23Q9H3S7 1636 aa17.76■□□□□ 0.43
AC009404.1-202ENST00000439955 ALKQ9UM73 1620 aa17.76■□□□□ 0.43
AC009404.1-202ENST00000439955 CFDP1Q9UEE9 299 aaPredicted RBP17.76■□□□□ 0.43
AC009404.1-202ENST00000439955 TNRQ92752 1358 aa17.75■□□□□ 0.43
AC009404.1-202ENST00000439955 VWDEQ8N2E2 1590 aa17.74■□□□□ 0.43
AC009404.1-202ENST00000439955 KIAA1107Q9UPP5 1409 aa17.73■□□□□ 0.43
AC009404.1-202ENST00000439955 POLR1AO95602 1720 aaPredicted RBP17.73■□□□□ 0.43
AC009404.1-202ENST00000439955 ANKLE2Q86XL3 938 aa17.73■□□□□ 0.43
AC009404.1-202ENST00000439955 ZNF644Q9H582 1327 aaPredicted RBP17.72■□□□□ 0.43
AC009404.1-202ENST00000439955 PLEKHH2Q8IVE3 1493 aa17.7■□□□□ 0.42
AC009404.1-202ENST00000439955 RGS17Q9UGC6 210 aaPredicted RBP17.7■□□□□ 0.42
AC009404.1-202ENST00000439955 NPHP4O75161 1426 aaPredicted RBP17.7■□□□□ 0.42
AC009404.1-202ENST00000439955 ADRA2BP18089 450 aa17.69■□□□□ 0.42
AC009404.1-202ENST00000439955 KIF3BO15066 747 aa17.68■□□□□ 0.42
AC009404.1-202ENST00000439955 THEMISQ8N1K5 641 aaPredicted RBP17.67■□□□□ 0.42
AC009404.1-202ENST00000439955 ADGBQ8N7X0 1667 aa17.67■□□□□ 0.42
AC009404.1-202ENST00000439955 FAM50AQ14320 339 aaKnown RBP17.66■□□□□ 0.42
AC009404.1-202ENST00000439955 DHX29Q7Z478 1369 aaKnown RBP17.66■□□□□ 0.42
AC009404.1-202ENST00000439955 PZPP20742 1482 aa17.65■□□□□ 0.42
AC009404.1-202ENST00000439955 CAMSAP2Q08AD1 1489 aa17.65■□□□□ 0.42
AC009404.1-202ENST00000439955 LRRC7Q96NW7 1537 aa17.65■□□□□ 0.42
AC009404.1-202ENST00000439955 WASHC2CQ9Y4E1 1318 aa17.65■□□□□ 0.42
AC009404.1-202ENST00000439955 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
AC009404.1-202ENST00000439955 UGGT1Q9NYU2 1555 aa17.63■□□□□ 0.41
AC009404.1-202ENST00000439955 MED14O60244 1454 aa17.63■□□□□ 0.41
AC009404.1-202ENST00000439955 KDM5DQ9BY66 1539 aa17.62■□□□□ 0.41
AC009404.1-202ENST00000439955 FAM135AQ9P2D6 1515 aa17.62■□□□□ 0.41
AC009404.1-202ENST00000439955 MBD5Q9P267 1494 aa17.62■□□□□ 0.41
AC009404.1-202ENST00000439955 POTEAQ6S8J7 498 aa17.6■□□□□ 0.41
AC009404.1-202ENST00000439955 ARHGEF5Q12774 1597 aa17.6■□□□□ 0.41
AC009404.1-202ENST00000439955 STRCP1A6NGW2 1772 aa17.6■□□□□ 0.41
AC009404.1-202ENST00000439955 IQGAP1P46940 1657 aa17.59■□□□□ 0.41
AC009404.1-202ENST00000439955 DEPDC5O75140 1603 aa17.59■□□□□ 0.41
AC009404.1-202ENST00000439955 RNF17Q9BXT8 1623 aaKnown RBP17.59■□□□□ 0.41
AC009404.1-202ENST00000439955 NLRP1Q9C000 1473 aa17.59■□□□□ 0.41
AC009404.1-202ENST00000439955 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
AC009404.1-202ENST00000439955 CROCC2H7BZ55 1655 aa17.58■□□□□ 0.41
AC009404.1-202ENST00000439955 DAPK1P53355 1430 aa17.58■□□□□ 0.41
AC009404.1-202ENST00000439955 ABCC5O15440 1437 aa17.55■□□□□ 0.4
AC009404.1-202ENST00000439955 SYNMO15061 1565 aa17.54■□□□□ 0.4
AC009404.1-202ENST00000439955 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
AC009404.1-202ENST00000439955 ITGAEP38570 1179 aa17.53■□□□□ 0.4
AC009404.1-202ENST00000439955 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
AC009404.1-202ENST00000439955 HFM1A2PYH4 1435 aa17.52■□□□□ 0.4
AC009404.1-202ENST00000439955 GCC2Q8IWJ2 1684 aa17.52■□□□□ 0.39
AC009404.1-202ENST00000439955 ADGRL2O95490 1459 aa17.51■□□□□ 0.39
AC009404.1-202ENST00000439955 CCDC141Q6ZP82 1450 aa17.51■□□□□ 0.39
AC009404.1-202ENST00000439955 MAST1Q9Y2H9 1570 aa17.5■□□□□ 0.39
AC009404.1-202ENST00000439955 SETD5Q9C0A6 1442 aa17.49■□□□□ 0.39
AC009404.1-202ENST00000439955 LTKP29376 864 aa17.48■□□□□ 0.39
AC009404.1-202ENST00000439955 ZC3H13Q5T200 1668 aaKnown RBP17.47■□□□□ 0.39
AC009404.1-202ENST00000439955 ERVK-7P63135 1459 aa17.46■□□□□ 0.39
AC009404.1-202ENST00000439955 SCAF11Q99590 1463 aaKnown RBP17.46■□□□□ 0.39
AC009404.1-202ENST00000439955 HRCP23327 699 aa17.46■□□□□ 0.39
AC009404.1-202ENST00000439955 TXNDC2Q86VQ3 553 aa17.46■□□□□ 0.39
AC009404.1-202ENST00000439955 RBM33Q96EV2 1170 aaKnown RBP17.46■□□□□ 0.39
AC009404.1-202ENST00000439955 ABCC3O15438 1527 aa17.46■□□□□ 0.39
AC009404.1-202ENST00000439955 NAIPQ13075 1403 aa17.46■□□□□ 0.39
AC009404.1-202ENST00000439955 FAM135BQ49AJ0 1406 aa17.45■□□□□ 0.38
AC009404.1-202ENST00000439955 SETD1AO15047 1707 aaKnown RBP17.44■□□□□ 0.38
AC009404.1-202ENST00000439955 RAB3GAP2Q9H2M9 1393 aa17.43■□□□□ 0.38
AC009404.1-202ENST00000439955 TSPY4P0CV99 314 aa17.43■□□□□ 0.38
AC009404.1-202ENST00000439955 TSPY10P0CW01 314 aa17.43■□□□□ 0.38
AC009404.1-202ENST00000439955 ANKRD30AQ9BXX3 1397 aa17.42■□□□□ 0.38
AC009404.1-202ENST00000439955 ACIN1Q9UKV3 1341 aaKnown RBP17.42■□□□□ 0.38
AC009404.1-202ENST00000439955 XIRP1Q702N8 1843 aaKnown RBP17.42■□□□□ 0.38
AC009404.1-202ENST00000439955 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
AC009404.1-202ENST00000439955 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
AC009404.1-202ENST00000439955 CHIC2Q9UKJ5 165 aa17.39■□□□□ 0.37
AC009404.1-202ENST00000439955 EID1Q9Y6B2 187 aa17.39■□□□□ 0.37
AC009404.1-202ENST00000439955 ROBO1Q9Y6N7 1651 aa17.38■□□□□ 0.37
AC009404.1-202ENST00000439955 ARHGAP23Q9P227 1491 aa17.37■□□□□ 0.37
AC009404.1-202ENST00000439955 SLIT1O75093 1534 aa17.37■□□□□ 0.37
AC009404.1-202ENST00000439955 PROSER2Q86WR7 435 aaPredicted RBP17.36■□□□□ 0.37
AC009404.1-202ENST00000439955 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
AC009404.1-202ENST00000439955 RRP7BPQ9NSQ0 103 aa17.35■□□□□ 0.37
AC009404.1-202ENST00000439955 MROH1Q8NDA8 1641 aa17.35■□□□□ 0.37
AC009404.1-202ENST00000439955 CEP152O94986 1710 aa17.33■□□□□ 0.37
AC009404.1-202ENST00000439955 KIF15Q9NS87 1388 aa17.33■□□□□ 0.36
AC009404.1-202ENST00000439955 KCNA6P17658 529 aa17.33■□□□□ 0.36
AC009404.1-202ENST00000439955 UPF1Q92900 1129 aaKnown RBP eCLIP17.33■□□□□ 0.36
AC009404.1-202ENST00000439955 TRIM52Q96A61 297 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms