RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 MAGI2Q86UL8 1455 aa14.75□□□□□ -0.05
CBX5-202ENST00000439541 DEPDC5O75140 1603 aa14.75□□□□□ -0.05
CBX5-202ENST00000439541 MROH1Q8NDA8 1641 aa14.75□□□□□ -0.05
CBX5-202ENST00000439541 SIGLEC1Q9BZZ2 1709 aa14.74□□□□□ -0.05
CBX5-202ENST00000439541 NUP155O75694 1391 aa14.74□□□□□ -0.05
CBX5-202ENST00000439541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.058e-7■■□□□ 12.5
CBX5-202ENST00000439541 FAM135AQ9P2D6 1515 aa14.73□□□□□ -0.05
CBX5-202ENST00000439541 KIF3BO15066 747 aa14.72□□□□□ -0.05
CBX5-202ENST00000439541 PRDM15P57071 1507 aaPredicted RBP14.71□□□□□ -0.05
CBX5-202ENST00000439541 FOXD1Q16676 465 aa14.71□□□□□ -0.05
CBX5-202ENST00000439541 MPHOSPH9Q99550 1183 aa14.71□□□□□ -0.05
CBX5-202ENST00000439541 IQGAP3Q86VI3 1631 aa14.71□□□□□ -0.05
CBX5-202ENST00000439541 RNF17Q9BXT8 1623 aaKnown RBP14.71□□□□□ -0.05
CBX5-202ENST00000439541 ATP10AO60312 1499 aa14.71□□□□□ -0.06
CBX5-202ENST00000439541 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
CBX5-202ENST00000439541 BCORL1Q5H9F3 1711 aa14.7□□□□□ -0.06
CBX5-202ENST00000439541 REREQ9P2R6 1566 aa14.69□□□□□ -0.06
CBX5-202ENST00000439541 VWDEQ8N2E2 1590 aa14.68□□□□□ -0.06
CBX5-202ENST00000439541 CEP152O94986 1710 aa14.66□□□□□ -0.06
CBX5-202ENST00000439541 PKD2Q13563 968 aa14.65□□□□□ -0.06
CBX5-202ENST00000439541 GGT6Q6P531 493 aa14.64□□□□□ -0.07
CBX5-202ENST00000439541 AGLP35573 1532 aa14.64□□□□□ -0.07
CBX5-202ENST00000439541 SIN3AQ96ST3 1273 aa14.64□□□□□ -0.07
CBX5-202ENST00000439541 ACIN1Q9UKV3 1341 aaKnown RBP14.64□□□□□ -0.07
CBX5-202ENST00000439541 CLSPNQ9HAW4 1339 aa14.63□□□□□ -0.07
CBX5-202ENST00000439541 ABCC3O15438 1527 aa14.63□□□□□ -0.07
CBX5-202ENST00000439541 TET3O43151 1660 aa14.62□□□□□ -0.07
CBX5-202ENST00000439541 KANK1Q14678 1352 aa14.62□□□□□ -0.07
CBX5-202ENST00000439541 E9PCH4 1651 aa14.62□□□□□ -0.07
CBX5-202ENST00000439541 EFCAB6Q5THR3 1501 aa14.61□□□□□ -0.07
CBX5-202ENST00000439541 ANKRD30BQ9BXX2 1392 aa14.6□□□□□ -0.07
CBX5-202ENST00000439541 NEUROD1Q13562 356 aa14.6□□□□□ -0.07
CBX5-202ENST00000439541 MLECQ14165 292 aa14.59□□□□□ -0.07
CBX5-202ENST00000439541 LMTK2Q8IWU2 1503 aa14.59□□□□□ -0.07
CBX5-202ENST00000439541 CAMSAP1Q5T5Y3 1602 aa14.59□□□□□ -0.07
CBX5-202ENST00000439541 ZC3H13Q5T200 1668 aaKnown RBP14.58□□□□□ -0.08
CBX5-202ENST00000439541 ARID4BQ4LE39 1312 aaPredicted RBP14.57□□□□□ -0.08
CBX5-202ENST00000439541 PLA2R1Q13018 1463 aa14.57□□□□□ -0.08
CBX5-202ENST00000439541 WASHC2CQ9Y4E1 1318 aa14.56□□□□□ -0.08
CBX5-202ENST00000439541 CLTCQ00610 1675 aaKnown RBP14.56□□□□□ -0.08
CBX5-202ENST00000439541 NPATQ14207 1427 aa14.55□□□□□ -0.08
CBX5-202ENST00000439541 SPHKAPQ2M3C7 1700 aa14.55□□□□□ -0.08
CBX5-202ENST00000439541 RPRD2Q5VT52 1461 aaKnown RBP14.54□□□□□ -0.08
CBX5-202ENST00000439541 UGGT1Q9NYU2 1555 aa14.53□□□□□ -0.08
CBX5-202ENST00000439541 TRPM2O94759 1503 aa14.53□□□□□ -0.08
CBX5-202ENST00000439541 CLTCL1P53675 1640 aa14.51□□□□□ -0.09
CBX5-202ENST00000439541 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
CBX5-202ENST00000439541 TONSLQ96HA7 1378 aa14.5□□□□□ -0.09
CBX5-202ENST00000439541 PTPRTO14522 1441 aa14.5□□□□□ -0.09
CBX5-202ENST00000439541 SYNMO15061 1565 aa14.48□□□□□ -0.09
CBX5-202ENST00000439541 ARHGAP31Q2M1Z3 1444 aa14.48□□□□□ -0.09
CBX5-202ENST00000439541 PREX1Q8TCU6 1659 aa14.48□□□□□ -0.09
CBX5-202ENST00000439541 FER1L4A9Z1Z3 1794 aa14.47□□□□□ -0.09
CBX5-202ENST00000439541 CFAP65Q6ZU64 1925 aaKnown RBP14.47□□□□□ -0.09
CBX5-202ENST00000439541 NOS1P29475 1434 aa14.45□□□□□ -0.1
CBX5-202ENST00000439541 ERVK-7P63135 1459 aa14.45□□□□□ -0.1
CBX5-202ENST00000439541 MADDQ8WXG6 1647 aa14.45□□□□□ -0.1
CBX5-202ENST00000439541 FBXO31Q5XUX0 539 aaPredicted RBP14.44□□□□□ -0.1
CBX5-202ENST00000439541 PPP6R1Q9UPN7 881 aa14.44□□□□□ -0.1
CBX5-202ENST00000439541 CNTLNQ9NXG0 1405 aa14.44□□□□□ -0.1
CBX5-202ENST00000439541 ESF1Q9H501 851 aaKnown RBP14.43□□□□□ -0.1
CBX5-202ENST00000439541 MROH2AA6NES4 1674 aa14.43□□□□□ -0.1
CBX5-202ENST00000439541 L3MBTL2Q969R5 705 aa14.43□□□□□ -0.1
CBX5-202ENST00000439541 PIK3C2BO00750 1634 aa14.42□□□□□ -0.1
CBX5-202ENST00000439541 ZMYM3Q14202 1370 aa14.42□□□□□ -0.1
CBX5-202ENST00000439541 RIMS1Q86UR5 1692 aaKnown RBP14.42□□□□□ -0.1
CBX5-202ENST00000439541 SPATA31D1Q6ZQQ2 1576 aa14.42□□□□□ -0.1
CBX5-202ENST00000439541 SPATA31E1Q6ZUB1 1445 aa14.41□□□□□ -0.1
CBX5-202ENST00000439541 C3P01024 1663 aa14.41□□□□□ -0.1
CBX5-202ENST00000439541 ADAMTSL3P82987 1691 aa14.4□□□□□ -0.1
CBX5-202ENST00000439541 RGL3Q3MIN7 710 aa14.4□□□□□ -0.1
CBX5-202ENST00000439541 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
CBX5-202ENST00000439541 ADGRB3O60242 1522 aa14.39□□□□□ -0.11
CBX5-202ENST00000439541 CEBPAP49715 358 aaPredicted RBP14.38□□□□□ -0.11
CBX5-202ENST00000439541 TIMELESSQ9UNS1 1208 aa14.38□□□□□ -0.11
CBX5-202ENST00000439541 KIF1BO60333 1816 aa14.37□□□□□ -0.11
CBX5-202ENST00000439541 PPP1R15AO75807 674 aaPredicted RBP14.37□□□□□ -0.11
CBX5-202ENST00000439541 CHGAP10645 457 aaKnown RBP14.36□□□□□ -0.11
CBX5-202ENST00000439541 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
CBX5-202ENST00000439541 IDI1Q13907 227 aa14.34□□□□□ -0.11
CBX5-202ENST00000439541 DCAF11Q8TEB1 546 aa14.34□□□□□ -0.11
CBX5-202ENST00000439541 KDM2AQ9Y2K7 1162 aa14.34□□□□□ -0.11
CBX5-202ENST00000439541 NEURL4Q96JN8 1562 aa14.34□□□□□ -0.11
CBX5-202ENST00000439541 TNRQ92752 1358 aa14.34□□□□□ -0.11
CBX5-202ENST00000439541 NBPF8Q3BBV2 869 aa14.34□□□□□ -0.11
CBX5-202ENST00000439541 MYO5BQ9ULV0 1848 aa14.34□□□□□ -0.11
CBX5-202ENST00000439541 TMEM131LA2VDJ0 1609 aa14.33□□□□□ -0.11
CBX5-202ENST00000439541 IFT172Q9UG01 1749 aa14.32□□□□□ -0.12
CBX5-202ENST00000439541 SLC52A1Q9NWF4 448 aa14.31□□□□□ -0.12
CBX5-202ENST00000439541 PRAG1Q86YV5 1406 aa14.3□□□□□ -0.12
CBX5-202ENST00000439541 MYO3AQ8NEV4 1616 aa14.3□□□□□ -0.12
CBX5-202ENST00000439541 UHRF1BP1Q6BDS2 1440 aa14.3□□□□□ -0.12
CBX5-202ENST00000439541 NEXMIFQ5QGS0 1516 aa14.29□□□□□ -0.12
CBX5-202ENST00000439541 PPLO60437 1756 aa14.29□□□□□ -0.12
CBX5-202ENST00000439541 A2ML1A8K2U0 1454 aa14.28□□□□□ -0.12
CBX5-202ENST00000439541 PTPRMP28827 1452 aa14.28□□□□□ -0.12
CBX5-202ENST00000439541 MYOM2P54296 1465 aa14.27□□□□□ -0.13
CBX5-202ENST00000439541 TRPM1Q7Z4N2 1603 aa14.27□□□□□ -0.13
CBX5-202ENST00000439541 UBR1Q8IWV7 1749 aa14.27□□□□□ -0.13
CBX5-202ENST00000439541 NUTM2DQ5VT03 806 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms