RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
ERGIC3-207ENST00000438317 MROH2AA6NES4 1674 aa15.88■□□□□ 0.13
ERGIC3-207ENST00000438317 PLA2R1Q13018 1463 aa15.84■□□□□ 0.13
ERGIC3-207ENST00000438317 GCC2Q8IWJ2 1684 aa15.84■□□□□ 0.13
ERGIC3-207ENST00000438317 PKD2Q13563 968 aa15.84■□□□□ 0.13
ERGIC3-207ENST00000438317 SAMD9LQ8IVG5 1584 aa15.83■□□□□ 0.12
ERGIC3-207ENST00000438317 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.12
ERGIC3-207ENST00000438317 PPP1R15AO75807 674 aaPredicted RBP15.81■□□□□ 0.12
ERGIC3-207ENST00000438317 ROCK1Q13464 1354 aa15.81■□□□□ 0.12
ERGIC3-207ENST00000438317 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
ERGIC3-207ENST00000438317 CDC42BPAQ5VT25 1732 aa15.81■□□□□ 0.12
ERGIC3-207ENST00000438317 MIER1Q8N108 512 aa15.81■□□□□ 0.12
ERGIC3-207ENST00000438317 MYO3AQ8NEV4 1616 aa15.81■□□□□ 0.12
ERGIC3-207ENST00000438317 SIN3AQ96ST3 1273 aa15.81■□□□□ 0.12
ERGIC3-207ENST00000438317 CLTCQ00610 1675 aaKnown RBP15.8■□□□□ 0.12
ERGIC3-207ENST00000438317 CEP170BQ9Y4F5 1589 aaPredicted RBP15.8■□□□□ 0.12
ERGIC3-207ENST00000438317 HSPA1LP34931 641 aa15.8■□□□□ 0.12
ERGIC3-207ENST00000438317 PPP6R1Q9UPN7 881 aa15.79■□□□□ 0.12
ERGIC3-207ENST00000438317 MED1Q15648 1581 aaPredicted RBP15.79■□□□□ 0.12
ERGIC3-207ENST00000438317 SPAG9O60271 1321 aaKnown RBP15.77■□□□□ 0.12
ERGIC3-207ENST00000438317 HNRNPMP52272 730 aaKnown RBP eCLIP15.77■□□□□ 0.12
ERGIC3-207ENST00000438317 PLXNC1O60486 1568 aa15.77■□□□□ 0.11
ERGIC3-207ENST00000438317 DNMT1P26358 1616 aaKnown RBP15.76■□□□□ 0.11
ERGIC3-207ENST00000438317 RRP7BPQ9NSQ0 103 aa15.76■□□□□ 0.11
ERGIC3-207ENST00000438317 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
ERGIC3-207ENST00000438317 SYCP2Q9BX26 1530 aa15.75■□□□□ 0.11
ERGIC3-207ENST00000438317 CHIC2Q9UKJ5 165 aa15.75■□□□□ 0.11
ERGIC3-207ENST00000438317 DAPK1P53355 1430 aa15.75■□□□□ 0.11
ERGIC3-207ENST00000438317 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
ERGIC3-207ENST00000438317 A2MP01023 1474 aa15.74■□□□□ 0.11
ERGIC3-207ENST00000438317 PIP4K2BP78356 416 aa15.74■□□□□ 0.11
ERGIC3-207ENST00000438317 GGT6Q6P531 493 aa15.74■□□□□ 0.11
ERGIC3-207ENST00000438317 TONSLQ96HA7 1378 aa15.74■□□□□ 0.11
ERGIC3-207ENST00000438317 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
ERGIC3-207ENST00000438317 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
ERGIC3-207ENST00000438317 A2ML1A8K2U0 1454 aa15.72■□□□□ 0.11
ERGIC3-207ENST00000438317 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
ERGIC3-207ENST00000438317 INO80Q9ULG1 1556 aaPredicted RBP15.72■□□□□ 0.11
ERGIC3-207ENST00000438317 TOM1O60784 492 aa15.72■□□□□ 0.11
ERGIC3-207ENST00000438317 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
ERGIC3-207ENST00000438317 ABCC5O15440 1437 aa15.71■□□□□ 0.11
ERGIC3-207ENST00000438317 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
ERGIC3-207ENST00000438317 CPS1P31327 1500 aa15.7■□□□□ 0.1
ERGIC3-207ENST00000438317 SHANK2Q9UPX8 1470 aa15.7■□□□□ 0.1
ERGIC3-207ENST00000438317 NEURL4Q96JN8 1562 aa15.7■□□□□ 0.1
ERGIC3-207ENST00000438317 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
ERGIC3-207ENST00000438317 MPHOSPH9Q99550 1183 aa15.68■□□□□ 0.1
ERGIC3-207ENST00000438317 ADGBQ8N7X0 1667 aa15.67■□□□□ 0.1
ERGIC3-207ENST00000438317 CAMSAP2Q08AD1 1489 aa15.66■□□□□ 0.1
ERGIC3-207ENST00000438317 PLEKHH2Q8IVE3 1493 aa15.66■□□□□ 0.1
ERGIC3-207ENST00000438317 POLR1AO95602 1720 aaPredicted RBP15.66■□□□□ 0.1
ERGIC3-207ENST00000438317 FBXO31Q5XUX0 539 aaPredicted RBP15.66■□□□□ 0.1
ERGIC3-207ENST00000438317 VWDEQ8N2E2 1590 aa15.65■□□□□ 0.1
ERGIC3-207ENST00000438317 ZNF644Q9H582 1327 aaPredicted RBP15.65■□□□□ 0.1
ERGIC3-207ENST00000438317 ADGRL2O95490 1459 aa15.64■□□□□ 0.09
ERGIC3-207ENST00000438317 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
ERGIC3-207ENST00000438317 TNRQ92752 1358 aa15.62■□□□□ 0.09
ERGIC3-207ENST00000438317 RSPH4AQ5TD94 716 aa15.62■□□□□ 0.09
ERGIC3-207ENST00000438317 CROCC2H7BZ55 1655 aa15.62■□□□□ 0.09
ERGIC3-207ENST00000438317 ANKRD30AQ9BXX3 1397 aa15.62■□□□□ 0.09
ERGIC3-207ENST00000438317 ANKLE2Q86XL3 938 aa15.61■□□□□ 0.09
ERGIC3-207ENST00000438317 DHX29Q7Z478 1369 aaKnown RBP15.61■□□□□ 0.09
ERGIC3-207ENST00000438317 MED14O60244 1454 aa15.6■□□□□ 0.09
ERGIC3-207ENST00000438317 MBD5Q9P267 1494 aa15.6■□□□□ 0.09
ERGIC3-207ENST00000438317 RTEL1-TNFRSF6BF6WH68 1400 aa15.59■□□□□ 0.09
ERGIC3-207ENST00000438317 PZPP20742 1482 aa15.59■□□□□ 0.09
ERGIC3-207ENST00000438317 TSPY4P0CV99 314 aa15.58■□□□□ 0.08
ERGIC3-207ENST00000438317 TSPY10P0CW01 314 aa15.58■□□□□ 0.08
ERGIC3-207ENST00000438317 THEMISQ8N1K5 641 aaPredicted RBP15.58■□□□□ 0.08
ERGIC3-207ENST00000438317 RGS17Q9UGC6 210 aaPredicted RBP15.58■□□□□ 0.08
ERGIC3-207ENST00000438317 ANKRD30BQ9BXX2 1392 aa15.58■□□□□ 0.08
ERGIC3-207ENST00000438317 NPHP4O75161 1426 aaPredicted RBP15.58■□□□□ 0.08
ERGIC3-207ENST00000438317 STRCP1A6NGW2 1772 aa15.57■□□□□ 0.08
ERGIC3-207ENST00000438317 KIF3BO15066 747 aa15.56■□□□□ 0.08
ERGIC3-207ENST00000438317 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
ERGIC3-207ENST00000438317 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
ERGIC3-207ENST00000438317 ARHGEF5Q12774 1597 aa15.56■□□□□ 0.08
ERGIC3-207ENST00000438317 DEPDC5O75140 1603 aa15.56■□□□□ 0.08
ERGIC3-207ENST00000438317 LRRC7Q96NW7 1537 aa15.55■□□□□ 0.08
ERGIC3-207ENST00000438317 KDM5DQ9BY66 1539 aa15.55■□□□□ 0.08
ERGIC3-207ENST00000438317 UGGT1Q9NYU2 1555 aa15.54■□□□□ 0.08
ERGIC3-207ENST00000438317 NLRP1Q9C000 1473 aa15.54■□□□□ 0.08
ERGIC3-207ENST00000438317 DDX10Q13206 875 aaKnown RBP15.54■□□□□ 0.08
ERGIC3-207ENST00000438317 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
ERGIC3-207ENST00000438317 FAM135AQ9P2D6 1515 aa15.53■□□□□ 0.08
ERGIC3-207ENST00000438317 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
ERGIC3-207ENST00000438317 GTF3C3Q9Y5Q9 886 aa15.53■□□□□ 0.08
ERGIC3-207ENST00000438317 RPRD2Q5VT52 1461 aaKnown RBP15.52■□□□□ 0.08
ERGIC3-207ENST00000438317 IQGAP1P46940 1657 aa15.52■□□□□ 0.08
ERGIC3-207ENST00000438317 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
ERGIC3-207ENST00000438317 L3MBTL2Q969R5 705 aa15.5■□□□□ 0.07
ERGIC3-207ENST00000438317 RNF17Q9BXT8 1623 aaKnown RBP15.5■□□□□ 0.07
ERGIC3-207ENST00000438317 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
ERGIC3-207ENST00000438317 EIF4G2P78344 907 aaKnown RBP eCLIP15.48■□□□□ 0.07
ERGIC3-207ENST00000438317 SYNMO15061 1565 aa15.48■□□□□ 0.07
ERGIC3-207ENST00000438317 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.07
ERGIC3-207ENST00000438317 ANP32CO43423 234 aa15.46■□□□□ 0.07
ERGIC3-207ENST00000438317 ZC3H13Q5T200 1668 aaKnown RBP15.46■□□□□ 0.07
ERGIC3-207ENST00000438317 FOXD1Q16676 465 aa15.44■□□□□ 0.06
ERGIC3-207ENST00000438317 POTEAQ6S8J7 498 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms