RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 MROH1Q8NDA8 1641 aa17.42■□□□□ 0.38
SNHG3-202ENST00000437681 MADDQ8WXG6 1647 aa17.41■□□□□ 0.38
SNHG3-202ENST00000437681 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
SNHG3-202ENST00000437681 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.37
SNHG3-202ENST00000437681 IQGAP3Q86VI3 1631 aa17.37■□□□□ 0.37
SNHG3-202ENST00000437681 ARHGAP31Q2M1Z3 1444 aa17.37■□□□□ 0.37
SNHG3-202ENST00000437681 RIMS1Q86UR5 1692 aaKnown RBP17.37■□□□□ 0.37
SNHG3-202ENST00000437681 NPATQ14207 1427 aa17.36■□□□□ 0.37
SNHG3-202ENST00000437681 HRCP23327 699 aa17.36■□□□□ 0.37
SNHG3-202ENST00000437681 NAIPQ13075 1403 aa17.35■□□□□ 0.37
SNHG3-202ENST00000437681 ABCC3O15438 1527 aa17.35■□□□□ 0.37
SNHG3-202ENST00000437681 KANK1Q14678 1352 aa17.34■□□□□ 0.37
SNHG3-202ENST00000437681 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
SNHG3-202ENST00000437681 TET3O43151 1660 aa17.34■□□□□ 0.37
SNHG3-202ENST00000437681 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
SNHG3-202ENST00000437681 C3P01024 1663 aa17.34■□□□□ 0.37
SNHG3-202ENST00000437681 PTPRMP28827 1452 aa17.34■□□□□ 0.37
SNHG3-202ENST00000437681 CAMSAP1Q5T5Y3 1602 aa17.33■□□□□ 0.37
SNHG3-202ENST00000437681 RPRD2Q5VT52 1461 aaKnown RBP17.33■□□□□ 0.37
SNHG3-202ENST00000437681 PELP1Q8IZL8 1130 aaKnown RBP17.32■□□□□ 0.36
SNHG3-202ENST00000437681 KDM4FA0A1W2PPD8 638 aa17.32■□□□□ 0.36
SNHG3-202ENST00000437681 PPARGC1BQ86YN6 1023 aaKnown RBP17.31■□□□□ 0.36
SNHG3-202ENST00000437681 PZPP20742 1482 aa17.31■□□□□ 0.36
SNHG3-202ENST00000437681 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
SNHG3-202ENST00000437681 KIF3BO15066 747 aa17.29■□□□□ 0.36
SNHG3-202ENST00000437681 CEP152O94986 1710 aa17.29■□□□□ 0.36
SNHG3-202ENST00000437681 EFCAB6Q5THR3 1501 aa17.28■□□□□ 0.36
SNHG3-202ENST00000437681 SETD1BQ9UPS6 1966 aaKnown RBP17.28■□□□□ 0.36
SNHG3-202ENST00000437681 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
SNHG3-202ENST00000437681 PREX1Q8TCU6 1659 aa17.27■□□□□ 0.36
SNHG3-202ENST00000437681 SPATA31D1Q6ZQQ2 1576 aa17.27■□□□□ 0.36
SNHG3-202ENST00000437681 ZNF142P52746 1687 aaPredicted RBP17.27■□□□□ 0.35
SNHG3-202ENST00000437681 ESF1Q9H501 851 aaKnown RBP17.26■□□□□ 0.35
SNHG3-202ENST00000437681 SETD5Q9C0A6 1442 aa17.26■□□□□ 0.35
SNHG3-202ENST00000437681 CHIC2Q9UKJ5 165 aa17.26■□□□□ 0.35
SNHG3-202ENST00000437681 ZMYM3Q14202 1370 aa17.24■□□□□ 0.35
SNHG3-202ENST00000437681 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
SNHG3-202ENST00000437681 NLRP1Q9C000 1473 aa17.21■□□□□ 0.34
SNHG3-202ENST00000437681 GGT6Q6P531 493 aa17.19■□□□□ 0.34
SNHG3-202ENST00000437681 ERVK-7P63135 1459 aa17.19■□□□□ 0.34
SNHG3-202ENST00000437681 TRIM26Q12899 539 aaPredicted RBP17.18■□□□□ 0.34
SNHG3-202ENST00000437681 E9PCH4 1651 aa17.18■□□□□ 0.34
SNHG3-202ENST00000437681 MYO3AQ8NEV4 1616 aa17.18■□□□□ 0.34
SNHG3-202ENST00000437681 NOS1P29475 1434 aa17.17■□□□□ 0.34
SNHG3-202ENST00000437681 NEURL4Q96JN8 1562 aa17.16■□□□□ 0.34
SNHG3-202ENST00000437681 PIK3C2BO00750 1634 aa17.16■□□□□ 0.34
SNHG3-202ENST00000437681 SPHKAPQ2M3C7 1700 aa17.15■□□□□ 0.34
SNHG3-202ENST00000437681 MYT1Q01538 1121 aa17.15■□□□□ 0.34
SNHG3-202ENST00000437681 MLECQ14165 292 aa17.15■□□□□ 0.34
SNHG3-202ENST00000437681 PTPRTO14522 1441 aa17.14■□□□□ 0.34
SNHG3-202ENST00000437681 NUP155O75694 1391 aa17.14■□□□□ 0.33
SNHG3-202ENST00000437681 ITGAEP38570 1179 aa17.14■□□□□ 0.33
SNHG3-202ENST00000437681 A2ML1A8K2U0 1454 aa17.14■□□□□ 0.33
SNHG3-202ENST00000437681 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
SNHG3-202ENST00000437681 TNRQ92752 1358 aa17.12■□□□□ 0.33
SNHG3-202ENST00000437681 TRPM2O94759 1503 aa17.12■□□□□ 0.33
SNHG3-202ENST00000437681 CEP170BQ9Y4F5 1589 aaPredicted RBP17.11■□□□□ 0.33
SNHG3-202ENST00000437681 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
SNHG3-202ENST00000437681 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
SNHG3-202ENST00000437681 SYNMO15061 1565 aa17.1■□□□□ 0.33
SNHG3-202ENST00000437681 LMTK3Q96Q04 1460 aa17.08■□□□□ 0.33
SNHG3-202ENST00000437681 SLC52A1Q9NWF4 448 aa17.08■□□□□ 0.32
SNHG3-202ENST00000437681 AEBP2Q6ZN18 517 aaPredicted RBP17.07■□□□□ 0.32
SNHG3-202ENST00000437681 ADGRB3O60242 1522 aa17.06■□□□□ 0.32
SNHG3-202ENST00000437681 UBR1Q8IWV7 1749 aa17.06■□□□□ 0.32
SNHG3-202ENST00000437681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNHG3-202ENST00000437681 SLIT1O75093 1534 aa17.04■□□□□ 0.32
SNHG3-202ENST00000437681 KIF1BO60333 1816 aa17.01■□□□□ 0.31
SNHG3-202ENST00000437681 UGGT1Q9NYU2 1555 aa17.01■□□□□ 0.31
SNHG3-202ENST00000437681 ARHGAP23Q9P227 1491 aa17.01■□□□□ 0.31
SNHG3-202ENST00000437681 TMEM131LA2VDJ0 1609 aa17.01■□□□□ 0.31
SNHG3-202ENST00000437681 POLR1AO95602 1720 aaPredicted RBP17.01■□□□□ 0.31
SNHG3-202ENST00000437681 MPHOSPH9Q99550 1183 aa16.99■□□□□ 0.31
SNHG3-202ENST00000437681 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
SNHG3-202ENST00000437681 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
SNHG3-202ENST00000437681 CEBPAP49715 358 aaPredicted RBP16.98■□□□□ 0.31
SNHG3-202ENST00000437681 CLTCL1P53675 1640 aa16.97■□□□□ 0.31
SNHG3-202ENST00000437681 MED14O60244 1454 aa16.97■□□□□ 0.31
SNHG3-202ENST00000437681 THEMISQ8N1K5 641 aaPredicted RBP16.96■□□□□ 0.31
SNHG3-202ENST00000437681 PKD2Q13563 968 aa16.96■□□□□ 0.3
SNHG3-202ENST00000437681 FBXO31Q5XUX0 539 aaPredicted RBP16.95■□□□□ 0.3
SNHG3-202ENST00000437681 CFAP65Q6ZU64 1925 aaKnown RBP16.93■□□□□ 0.3
SNHG3-202ENST00000437681 STRCQ7RTU9 1775 aa16.93■□□□□ 0.3
SNHG3-202ENST00000437681 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
SNHG3-202ENST00000437681 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
SNHG3-202ENST00000437681 STAC3Q96MF2 364 aa16.92■□□□□ 0.3
SNHG3-202ENST00000437681 ANKRD30BQ9BXX2 1392 aa16.92■□□□□ 0.3
SNHG3-202ENST00000437681 ZFYVE9O95405 1425 aa16.91■□□□□ 0.3
SNHG3-202ENST00000437681 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
SNHG3-202ENST00000437681 DIP2AQ14689 1571 aa16.91■□□□□ 0.3
SNHG3-202ENST00000437681 IFT172Q9UG01 1749 aa16.91■□□□□ 0.3
SNHG3-202ENST00000437681 CCDC144AA2RUR9 1427 aa16.9■□□□□ 0.3
SNHG3-202ENST00000437681 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.3
SNHG3-202ENST00000437681 MYO5BQ9ULV0 1848 aa16.89■□□□□ 0.29
SNHG3-202ENST00000437681 IDI1Q13907 227 aa16.89■□□□□ 0.29
SNHG3-202ENST00000437681 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNHG3-202ENST00000437681 CLSPNQ9HAW4 1339 aa16.89■□□□□ 0.29
SNHG3-202ENST00000437681 SCAF11Q99590 1463 aaKnown RBP16.88■□□□□ 0.29
SNHG3-202ENST00000437681 PPLO60437 1756 aa16.88■□□□□ 0.29
SNHG3-202ENST00000437681 SPATA31E1Q6ZUB1 1445 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms