RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 TCOF1Q13428 1488 aaKnown RBP21.31■■□□□ 1
CDC42EP1-204ENST00000434728 KDM5DQ9BY66 1539 aa21.3■■□□□ 1
CDC42EP1-204ENST00000434728 WASHC2CQ9Y4E1 1318 aa21.29■■□□□ 1
CDC42EP1-204ENST00000434728 TNRQ92752 1358 aa21.29■■□□□ 1
CDC42EP1-204ENST00000434728 TSPY4P0CV99 314 aa21.29■■□□□ 1
CDC42EP1-204ENST00000434728 TSPY10P0CW01 314 aa21.29■■□□□ 1
CDC42EP1-204ENST00000434728 DNMT1P26358 1616 aaKnown RBP21.28■■□□□ 1
CDC42EP1-204ENST00000434728 FAM135AQ9P2D6 1515 aa21.27■■□□□ 1
CDC42EP1-204ENST00000434728 POLR1AO95602 1720 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP1-204ENST00000434728 PZPP20742 1482 aa21.26■□□□□ 0.99
CDC42EP1-204ENST00000434728 FBXO31Q5XUX0 539 aaPredicted RBP21.25■□□□□ 0.99
CDC42EP1-204ENST00000434728 ILDR2Q71H61 639 aa21.25■□□□□ 0.99
CDC42EP1-204ENST00000434728 ARHGEF5Q12774 1597 aa21.23■□□□□ 0.99
CDC42EP1-204ENST00000434728 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
CDC42EP1-204ENST00000434728 SOCS7O14512 581 aa21.2■□□□□ 0.98
CDC42EP1-204ENST00000434728 VPS8Q8N3P4 1428 aa21.2■□□□□ 0.98
CDC42EP1-204ENST00000434728 ANKLE2Q86XL3 938 aa21.19■□□□□ 0.98
CDC42EP1-204ENST00000434728 THEMISQ8N1K5 641 aaPredicted RBP21.19■□□□□ 0.98
CDC42EP1-204ENST00000434728 LRRC9Q6ZRR7 1453 aa21.19■□□□□ 0.98
CDC42EP1-204ENST00000434728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.18■□□□□ 0.98
CDC42EP1-204ENST00000434728 NLRP1Q9C000 1473 aa21.18■□□□□ 0.98
CDC42EP1-204ENST00000434728 MIA2Q96PC5 1412 aa21.17■□□□□ 0.98
CDC42EP1-204ENST00000434728 UGGT1Q9NYU2 1555 aa21.17■□□□□ 0.98
CDC42EP1-204ENST00000434728 CPS1P31327 1500 aa21.16■□□□□ 0.98
CDC42EP1-204ENST00000434728 NEURL4Q96JN8 1562 aa21.15■□□□□ 0.98
CDC42EP1-204ENST00000434728 PIP4K2BP78356 416 aa21.15■□□□□ 0.98
CDC42EP1-204ENST00000434728 ZC3H13Q5T200 1668 aaKnown RBP21.15■□□□□ 0.98
CDC42EP1-204ENST00000434728 RNF17Q9BXT8 1623 aaKnown RBP21.14■□□□□ 0.97
CDC42EP1-204ENST00000434728 SHANK2Q9UPX8 1470 aa21.13■□□□□ 0.97
CDC42EP1-204ENST00000434728 TOM1O60784 492 aa21.13■□□□□ 0.97
CDC42EP1-204ENST00000434728 MAST1Q9Y2H9 1570 aa21.12■□□□□ 0.97
CDC42EP1-204ENST00000434728 EIF2AK4Q9P2K8 1649 aaKnown RBP21.11■□□□□ 0.97
CDC42EP1-204ENST00000434728 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
CDC42EP1-204ENST00000434728 NPHP4O75161 1426 aaPredicted RBP21.11■□□□□ 0.97
CDC42EP1-204ENST00000434728 ABCC3O15438 1527 aa21.1■□□□□ 0.97
CDC42EP1-204ENST00000434728 MYOM3Q5VTT5 1437 aa21.1■□□□□ 0.97
CDC42EP1-204ENST00000434728 DEPDC5O75140 1603 aa21.09■□□□□ 0.97
CDC42EP1-204ENST00000434728 CFAP65Q6ZU64 1925 aaKnown RBP21.08■□□□□ 0.97
CDC42EP1-204ENST00000434728 APLP2Q06481 763 aa21.08■□□□□ 0.97
CDC42EP1-204ENST00000434728 IQGAP1P46940 1657 aa21.08■□□□□ 0.96
CDC42EP1-204ENST00000434728 CEP152O94986 1710 aa21.07■□□□□ 0.96
CDC42EP1-204ENST00000434728 KANK4Q5T7N3 995 aaPredicted RBP21.07■□□□□ 0.96
CDC42EP1-204ENST00000434728 MAP3K1Q13233 1512 aa21.07■□□□□ 0.96
CDC42EP1-204ENST00000434728 DUOX2Q9NRD8 1548 aa21.05■□□□□ 0.96
CDC42EP1-204ENST00000434728 MED14O60244 1454 aa21.05■□□□□ 0.96
CDC42EP1-204ENST00000434728 ERVK-7P63135 1459 aa21.05■□□□□ 0.96
CDC42EP1-204ENST00000434728 VWDEQ8N2E2 1590 aa21.05■□□□□ 0.96
CDC42EP1-204ENST00000434728 HSPA1LP34931 641 aa21.04■□□□□ 0.96
CDC42EP1-204ENST00000434728 MROH1Q8NDA8 1641 aa21.01■□□□□ 0.95
CDC42EP1-204ENST00000434728 KIF15Q9NS87 1388 aa21.01■□□□□ 0.95
CDC42EP1-204ENST00000434728 CROCC2H7BZ55 1655 aa20.99■□□□□ 0.95
CDC42EP1-204ENST00000434728 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
CDC42EP1-204ENST00000434728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.98■□□□□ 0.95
CDC42EP1-204ENST00000434728 UBR1Q8IWV7 1749 aa20.98■□□□□ 0.95
CDC42EP1-204ENST00000434728 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
CDC42EP1-204ENST00000434728 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
CDC42EP1-204ENST00000434728 SYNMO15061 1565 aa20.97■□□□□ 0.95
CDC42EP1-204ENST00000434728 MED1Q15648 1581 aaPredicted RBP20.97■□□□□ 0.95
CDC42EP1-204ENST00000434728 KANK1Q14678 1352 aa20.97■□□□□ 0.95
CDC42EP1-204ENST00000434728 ERBINQ96RT1 1412 aa20.96■□□□□ 0.95
CDC42EP1-204ENST00000434728 SCAF11Q99590 1463 aaKnown RBP20.96■□□□□ 0.95
CDC42EP1-204ENST00000434728 STAG3Q9UJ98 1225 aa20.96■□□□□ 0.95
CDC42EP1-204ENST00000434728 PRDM15P57071 1507 aaPredicted RBP20.95■□□□□ 0.94
CDC42EP1-204ENST00000434728 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
CDC42EP1-204ENST00000434728 EID1Q9Y6B2 187 aa20.95■□□□□ 0.94
CDC42EP1-204ENST00000434728 STRCP1A6NGW2 1772 aa20.92■□□□□ 0.94
CDC42EP1-204ENST00000434728 TXNDC2Q86VQ3 553 aa20.92■□□□□ 0.94
CDC42EP1-204ENST00000434728 ABCC5O15440 1437 aa20.92■□□□□ 0.94
CDC42EP1-204ENST00000434728 LRRC7Q96NW7 1537 aa20.92■□□□□ 0.94
CDC42EP1-204ENST00000434728 DAPK1P53355 1430 aa20.91■□□□□ 0.94
CDC42EP1-204ENST00000434728 ARHGAP31Q2M1Z3 1444 aa20.91■□□□□ 0.94
CDC42EP1-204ENST00000434728 ANKRD30AQ9BXX3 1397 aa20.89■□□□□ 0.93
CDC42EP1-204ENST00000434728 CHIC2Q9UKJ5 165 aa20.89■□□□□ 0.93
CDC42EP1-204ENST00000434728 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
CDC42EP1-204ENST00000434728 SLIT1O75093 1534 aa20.88■□□□□ 0.93
CDC42EP1-204ENST00000434728 PIK3C2BO00750 1634 aa20.87■□□□□ 0.93
CDC42EP1-204ENST00000434728 LTKP29376 864 aa20.86■□□□□ 0.93
CDC42EP1-204ENST00000434728 ARHGAP23Q9P227 1491 aa20.86■□□□□ 0.93
CDC42EP1-204ENST00000434728 ALKQ9UM73 1620 aa20.86■□□□□ 0.93
CDC42EP1-204ENST00000434728 TMEM2Q9UHN6 1383 aa20.83■□□□□ 0.92
CDC42EP1-204ENST00000434728 EFCAB6Q5THR3 1501 aa20.83■□□□□ 0.92
CDC42EP1-204ENST00000434728 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
CDC42EP1-204ENST00000434728 BCANQ96GW7 911 aa20.8■□□□□ 0.92
CDC42EP1-204ENST00000434728 KDM5AP29375 1690 aaKnown RBP20.8■□□□□ 0.92
CDC42EP1-204ENST00000434728 LMTK2Q8IWU2 1503 aa20.78■□□□□ 0.92
CDC42EP1-204ENST00000434728 IDI1Q13907 227 aa20.78■□□□□ 0.92
CDC42EP1-204ENST00000434728 XIRP1Q702N8 1843 aaKnown RBP20.76■□□□□ 0.91
CDC42EP1-204ENST00000434728 SLC26A8Q96RN1 970 aa20.75■□□□□ 0.91
CDC42EP1-204ENST00000434728 ADGRB3O60242 1522 aa20.74■□□□□ 0.91
CDC42EP1-204ENST00000434728 PROSER2Q86WR7 435 aaPredicted RBP20.73■□□□□ 0.91
CDC42EP1-204ENST00000434728 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
CDC42EP1-204ENST00000434728 SLC52A1Q9NWF4 448 aa20.72■□□□□ 0.91
CDC42EP1-204ENST00000434728 ADGRL2O95490 1459 aa20.71■□□□□ 0.91
CDC42EP1-204ENST00000434728 PPP1R15AO75807 674 aaPredicted RBP20.71■□□□□ 0.91
CDC42EP1-204ENST00000434728 KCNA6P17658 529 aa20.71■□□□□ 0.91
CDC42EP1-204ENST00000434728 NOS1P29475 1434 aa20.7■□□□□ 0.9
CDC42EP1-204ENST00000434728 ANKRD50Q9ULJ7 1429 aa20.7■□□□□ 0.9
CDC42EP1-204ENST00000434728 RPRD2Q5VT52 1461 aaKnown RBP20.69■□□□□ 0.9
CDC42EP1-204ENST00000434728 HDGFP51858 240 aaKnown RBP20.67■□□□□ 0.9
CDC42EP1-204ENST00000434728 RBM33Q96EV2 1170 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms