RNA–Protein interactions for RNA: ENST00000433627.9

LSM14A-201, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LSM14A, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-201ENST00000433627 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
LSM14A-201ENST00000433627 NEFLP07196 543 aa18.9■□□□□ 0.62
LSM14A-201ENST00000433627 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.61
LSM14A-201ENST00000433627 OSCARQ8IYS5 282 aa18.89■□□□□ 0.61
LSM14A-201ENST00000433627 MAST1Q9Y2H9 1570 aa18.87■□□□□ 0.61
LSM14A-201ENST00000433627 WDR7Q9Y4E6 1490 aa18.87■□□□□ 0.61
LSM14A-201ENST00000433627 DUOX2Q9NRD8 1548 aa18.87■□□□□ 0.61
LSM14A-201ENST00000433627 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
LSM14A-201ENST00000433627 ABCC1P33527 1531 aa18.86■□□□□ 0.61
LSM14A-201ENST00000433627 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
LSM14A-201ENST00000433627 RALGAPBQ86X10 1494 aa18.86■□□□□ 0.61
LSM14A-201ENST00000433627 UHRF1BP1Q6BDS2 1440 aa18.85■□□□□ 0.61
LSM14A-201ENST00000433627 PLXNC1O60486 1568 aa18.83■□□□□ 0.61
LSM14A-201ENST00000433627 PLA2R1Q13018 1463 aa18.83■□□□□ 0.61
LSM14A-201ENST00000433627 FANCAO15360 1455 aa18.83■□□□□ 0.61
LSM14A-201ENST00000433627 SENP3-EIF4A1A0A087X0R7 540 aa18.83■□□□□ 0.6
LSM14A-201ENST00000433627 KIF3BO15066 747 aa18.83■□□□□ 0.6
LSM14A-201ENST00000433627 BCORL1Q5H9F3 1711 aa18.83■□□□□ 0.6
LSM14A-201ENST00000433627 ASXL2Q76L83 1435 aa18.82■□□□□ 0.6
LSM14A-201ENST00000433627 ERBINQ96RT1 1412 aa18.82■□□□□ 0.6
LSM14A-201ENST00000433627 UNC13BO14795 1591 aa18.82■□□□□ 0.6
LSM14A-201ENST00000433627 KDM5CP41229 1560 aa18.82■□□□□ 0.6
LSM14A-201ENST00000433627 SCAPERQ9BY12 1400 aa18.81■□□□□ 0.6
LSM14A-201ENST00000433627 ADGRL1O94910 1474 aa18.78■□□□□ 0.6
LSM14A-201ENST00000433627 IRX6P78412 446 aaPredicted RBP18.77■□□□□ 0.6
LSM14A-201ENST00000433627 PRAG1Q86YV5 1406 aa18.77■□□□□ 0.6
LSM14A-201ENST00000433627 A2MP01023 1474 aa18.77■□□□□ 0.59
LSM14A-201ENST00000433627 IQGAP3Q86VI3 1631 aa18.77■□□□□ 0.59
LSM14A-201ENST00000433627 DHX29Q7Z478 1369 aaKnown RBP18.74■□□□□ 0.59
LSM14A-201ENST00000433627 ZFYVE16Q7Z3T8 1539 aa18.74■□□□□ 0.59
LSM14A-201ENST00000433627 POLR1AO95602 1720 aaPredicted RBP18.73■□□□□ 0.59
LSM14A-201ENST00000433627 KANK1Q14678 1352 aa18.73■□□□□ 0.59
LSM14A-201ENST00000433627 ARID4BQ4LE39 1312 aaPredicted RBP18.72■□□□□ 0.59
LSM14A-201ENST00000433627 TMC1Q8TDI8 760 aa18.71■□□□□ 0.59
LSM14A-201ENST00000433627 RTEL1-TNFRSF6BF6WH68 1400 aa18.71■□□□□ 0.59
LSM14A-201ENST00000433627 ATP7AQ04656 1500 aa18.71■□□□□ 0.58
LSM14A-201ENST00000433627 MAGI2Q86UL8 1455 aa18.69■□□□□ 0.58
LSM14A-201ENST00000433627 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
LSM14A-201ENST00000433627 CHGAP10645 457 aaKnown RBP18.68■□□□□ 0.58
LSM14A-201ENST00000433627 ABCA9Q8IUA7 1624 aa18.68■□□□□ 0.58
LSM14A-201ENST00000433627 GGT6Q6P531 493 aa18.67■□□□□ 0.58
LSM14A-201ENST00000433627 TRPM1Q7Z4N2 1603 aa18.66■□□□□ 0.58
LSM14A-201ENST00000433627 CD109Q6YHK3 1445 aa18.66■□□□□ 0.58
LSM14A-201ENST00000433627 ATP10AO60312 1499 aa18.64■□□□□ 0.57
LSM14A-201ENST00000433627 E9PCH4 1651 aa18.64■□□□□ 0.57
LSM14A-201ENST00000433627 CC2D1BQ5T0F9 858 aaKnown RBP18.64■□□□□ 0.57
LSM14A-201ENST00000433627 DISP3Q9P2K9 1392 aa18.63■□□□□ 0.57
LSM14A-201ENST00000433627 TMF1P82094 1093 aa18.62■□□□□ 0.57
LSM14A-201ENST00000433627 CYB5RLQ6IPT4 315 aa18.62■□□□□ 0.57
LSM14A-201ENST00000433627 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
LSM14A-201ENST00000433627 ZBED9Q6R2W3 1325 aa18.61■□□□□ 0.57
LSM14A-201ENST00000433627 TESK2Q96S53 571 aa18.61■□□□□ 0.57
LSM14A-201ENST00000433627 INO80Q9ULG1 1556 aaPredicted RBP18.61■□□□□ 0.57
LSM14A-201ENST00000433627 GPRASP1Q5JY77 1395 aa18.6■□□□□ 0.57
LSM14A-201ENST00000433627 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
LSM14A-201ENST00000433627 PANK3Q9H999 370 aa18.59■□□□□ 0.57
LSM14A-201ENST00000433627 ZNF518AQ6AHZ1 1483 aa18.57■□□□□ 0.56
LSM14A-201ENST00000433627 MYBBP1AQ9BQG0 1328 aaKnown RBP18.57■□□□□ 0.56
LSM14A-201ENST00000433627 KTN1Q86UP2 1357 aaKnown RBP18.57■□□□□ 0.56
LSM14A-201ENST00000433627 UGGT1Q9NYU2 1555 aa18.57■□□□□ 0.56
LSM14A-201ENST00000433627 RALBP1Q15311 655 aa18.57■□□□□ 0.56
LSM14A-201ENST00000433627 TRPM2O94759 1503 aa18.57■□□□□ 0.56
LSM14A-201ENST00000433627 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
LSM14A-201ENST00000433627 PNISRQ8TF01 805 aaKnown RBP18.56■□□□□ 0.56
LSM14A-201ENST00000433627 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
LSM14A-201ENST00000433627 SENP3Q9H4L4 574 aaPredicted RBP18.56■□□□□ 0.56
LSM14A-201ENST00000433627 SPHKAPQ2M3C7 1700 aa18.55■□□□□ 0.56
LSM14A-201ENST00000433627 CFAP70Q5T0N1 1121 aa18.55■□□□□ 0.56
LSM14A-201ENST00000433627 PRDM15P57071 1507 aaPredicted RBP18.54■□□□□ 0.56
LSM14A-201ENST00000433627 TET3O43151 1660 aa18.54■□□□□ 0.56
LSM14A-201ENST00000433627 PTPRTO14522 1441 aa18.54■□□□□ 0.56
LSM14A-201ENST00000433627 TSHZ2Q9NRE2 1034 aa18.54■□□□□ 0.56
LSM14A-201ENST00000433627 COL17A1Q9UMD9 1497 aaPredicted RBP18.53■□□□□ 0.56
LSM14A-201ENST00000433627 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
LSM14A-201ENST00000433627 WASHC2CQ9Y4E1 1318 aa18.53■□□□□ 0.56
LSM14A-201ENST00000433627 KIDINS220Q9ULH0 1771 aa18.53■□□□□ 0.56
LSM14A-201ENST00000433627 DEPDC5O75140 1603 aa18.52■□□□□ 0.56
LSM14A-201ENST00000433627 ADGRF5Q8IZF2 1346 aa18.52■□□□□ 0.56
LSM14A-201ENST00000433627 POGZQ7Z3K3 1410 aa18.51■□□□□ 0.55
LSM14A-201ENST00000433627 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
LSM14A-201ENST00000433627 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
LSM14A-201ENST00000433627 NUTM2DQ5VT03 806 aaPredicted RBP18.49■□□□□ 0.55
LSM14A-201ENST00000433627 MADDQ8WXG6 1647 aa18.49■□□□□ 0.55
LSM14A-201ENST00000433627 BRD4O60885 1362 aaPredicted RBP18.48■□□□□ 0.55
LSM14A-201ENST00000433627 MROH1Q8NDA8 1641 aa18.48■□□□□ 0.55
LSM14A-201ENST00000433627 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
LSM14A-201ENST00000433627 CEP152O94986 1710 aa18.47■□□□□ 0.55
LSM14A-201ENST00000433627 VWDEQ8N2E2 1590 aa18.46■□□□□ 0.55
LSM14A-201ENST00000433627 SCAF11Q99590 1463 aaKnown RBP18.45■□□□□ 0.54
LSM14A-201ENST00000433627 LAMC1P11047 1609 aa18.45■□□□□ 0.54
LSM14A-201ENST00000433627 EFCAB6Q5THR3 1501 aa18.44■□□□□ 0.54
LSM14A-201ENST00000433627 PARD3Q8TEW0 1356 aa18.44■□□□□ 0.54
LSM14A-201ENST00000433627 STAC3Q96MF2 364 aa18.44■□□□□ 0.54
LSM14A-201ENST00000433627 NUDCQ9Y266 331 aa18.44■□□□□ 0.54
LSM14A-201ENST00000433627 PPRC1Q5VV67 1664 aaKnown RBP18.44■□□□□ 0.54
LSM14A-201ENST00000433627 CDCA8Q53HL2 280 aa18.43■□□□□ 0.54
LSM14A-201ENST00000433627 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
LSM14A-201ENST00000433627 RNF17Q9BXT8 1623 aaKnown RBP18.42■□□□□ 0.54
LSM14A-201ENST00000433627 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
LSM14A-201ENST00000433627 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms