RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 GPATCH8Q9UKJ3 1502 aaKnown RBP5□□□□□ -1.61
SHPRH-205ENST00000433355 CDC42BPAQ5VT25 1732 aa5□□□□□ -1.61
SHPRH-205ENST00000433355 ATP1B4Q9UN42 357 aaPredicted RBP5□□□□□ -1.61
SHPRH-205ENST00000433355 KIF1BO60333 1816 aa4.99□□□□□ -1.61
SHPRH-205ENST00000433355 TRIM52Q96A61 297 aa4.99□□□□□ -1.61
SHPRH-205ENST00000433355 PRG4Q92954 1404 aaPredicted RBP4.99□□□□□ -1.61
SHPRH-205ENST00000433355 NLRP13Q86W25 1043 aa4.99□□□□□ -1.61
SHPRH-205ENST00000433355 CLASP1Q7Z460 1538 aa4.99□□□□□ -1.61
SHPRH-205ENST00000433355 NUP155O75694 1391 aa4.99□□□□□ -1.61
SHPRH-205ENST00000433355 ZNF428Q96B54 188 aa4.99□□□□□ -1.61
SHPRH-205ENST00000433355 MYOM2P54296 1465 aa4.99□□□□□ -1.61
SHPRH-205ENST00000433355 ADGRL1O94910 1474 aa4.98□□□□□ -1.61
SHPRH-205ENST00000433355 NKTRP30414 1462 aaKnown RBP4.98□□□□□ -1.61
SHPRH-205ENST00000433355 CFAP53Q96M91 514 aa4.98□□□□□ -1.61
SHPRH-205ENST00000433355 CEP170Q5SW79 1584 aa4.98□□□□□ -1.61
SHPRH-205ENST00000433355 ABCC1P33527 1531 aa4.98□□□□□ -1.61
SHPRH-205ENST00000433355 USP47Q96K76 1375 aa4.98□□□□□ -1.61
SHPRH-205ENST00000433355 HDAC5Q9UQL6 1122 aa4.98□□□□□ -1.61
SHPRH-205ENST00000433355 TRPM2O94759 1503 aa4.98□□□□□ -1.61
SHPRH-205ENST00000433355 ARHGEF40Q8TER5 1519 aa4.97□□□□□ -1.61
SHPRH-205ENST00000433355 LMTK2Q8IWU2 1503 aa4.97□□□□□ -1.61
SHPRH-205ENST00000433355 TTC37Q6PGP7 1564 aa4.97□□□□□ -1.61
SHPRH-205ENST00000433355 WWC1Q8IX03 1113 aa4.97□□□□□ -1.61
SHPRH-205ENST00000433355 ABCA9Q8IUA7 1624 aa4.97□□□□□ -1.61
SHPRH-205ENST00000433355 RTL5Q5HYW3 569 aaPredicted RBP4.97□□□□□ -1.61
SHPRH-205ENST00000433355 UPF2Q9HAU5 1272 aaKnown RBP4.97□□□□□ -1.61
SHPRH-205ENST00000433355 CHD1O14646 1710 aa4.97□□□□□ -1.61
SHPRH-205ENST00000433355 CACNA1FO60840 1977 aa4.97□□□□□ -1.61
SHPRH-205ENST00000433355 PTMSP20962 102 aa4.96□□□□□ -1.61
SHPRH-205ENST00000433355 ASXL2Q76L83 1435 aa4.96□□□□□ -1.61
SHPRH-205ENST00000433355 FANCAO15360 1455 aa4.96□□□□□ -1.62
SHPRH-205ENST00000433355 ANP32AP39687 249 aaKnown RBP4.96□□□□□ -1.62
SHPRH-205ENST00000433355 PLCH2O75038 1416 aa4.96□□□□□ -1.62
SHPRH-205ENST00000433355 POGZQ7Z3K3 1410 aa4.96□□□□□ -1.62
SHPRH-205ENST00000433355 ATP7AQ04656 1500 aa4.96□□□□□ -1.62
SHPRH-205ENST00000433355 RNF17Q9BXT8 1623 aaKnown RBP4.96□□□□□ -1.62
SHPRH-205ENST00000433355 PLEKHG2Q9H7P9 1386 aa4.96□□□□□ -1.62
SHPRH-205ENST00000433355 KDM5AP29375 1690 aaKnown RBP4.96□□□□□ -1.62
SHPRH-205ENST00000433355 KNSTRNQ9Y448 316 aa4.96□□□□□ -1.62
SHPRH-205ENST00000433355 TMF1P82094 1093 aa4.95□□□□□ -1.62
SHPRH-205ENST00000433355 ANO8Q9HCE9 1232 aaPredicted RBP4.95□□□□□ -1.62
SHPRH-205ENST00000433355 HECW2Q9P2P5 1572 aa4.95□□□□□ -1.62
SHPRH-205ENST00000433355 DHX29Q7Z478 1369 aaKnown RBP4.95□□□□□ -1.62
SHPRH-205ENST00000433355 SETBP1Q9Y6X0 1596 aa4.95□□□□□ -1.62
SHPRH-205ENST00000433355 JPH4Q96JJ6 628 aa4.95□□□□□ -1.62
SHPRH-205ENST00000433355 DEPDC5O75140 1603 aa4.95□□□□□ -1.62
SHPRH-205ENST00000433355 USP35Q9P2H5 1018 aa4.95□□□□□ -1.62
SHPRH-205ENST00000433355 HMGB2P26583 209 aaKnown RBP4.94□□□□□ -1.62
SHPRH-205ENST00000433355 SLC52A1Q9NWF4 448 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 PLA2R1Q13018 1463 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 MYBBP1AQ9BQG0 1328 aaKnown RBP4.94□□□□□ -1.62
SHPRH-205ENST00000433355 UGGT1Q9NYU2 1555 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 ZNF608Q9ULD9 1512 aaPredicted RBP4.94□□□□□ -1.62
SHPRH-205ENST00000433355 ABCC5O15440 1437 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 ZFYVE9O95405 1425 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 KIF16BQ96L93 1317 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 CEP152O94986 1710 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 DDRGK1Q96HY6 314 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 SPAG9O60271 1321 aaKnown RBP4.94□□□□□ -1.62
SHPRH-205ENST00000433355 REREQ9P2R6 1566 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 MPHOSPH9Q99550 1183 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 MROH1Q8NDA8 1641 aa4.94□□□□□ -1.62
SHPRH-205ENST00000433355 MBD5Q9P267 1494 aa4.93□□□□□ -1.62
SHPRH-205ENST00000433355 MLH3Q9UHC1 1453 aa4.93□□□□□ -1.62
SHPRH-205ENST00000433355 KLHL34Q8N239 644 aa4.93□□□□□ -1.62
SHPRH-205ENST00000433355 INO80Q9ULG1 1556 aaPredicted RBP4.93□□□□□ -1.62
SHPRH-205ENST00000433355 ARHGAP31Q2M1Z3 1444 aa4.93□□□□□ -1.62
SHPRH-205ENST00000433355 SETD1BQ9UPS6 1966 aaKnown RBP4.93□□□□□ -1.62
SHPRH-205ENST00000433355 ZFYVE16Q7Z3T8 1539 aa4.93□□□□□ -1.62
SHPRH-205ENST00000433355 SCAF11Q99590 1463 aaKnown RBP4.93□□□□□ -1.62
SHPRH-205ENST00000433355 PDIA4P13667 645 aaKnown RBP4.93□□□□□ -1.62
SHPRH-205ENST00000433355 CGNL1Q0VF96 1302 aa4.93□□□□□ -1.62
SHPRH-205ENST00000433355 ESF1Q9H501 851 aaKnown RBP4.93□□□□□ -1.62
SHPRH-205ENST00000433355 EFCAB6Q5THR3 1501 aa4.92□□□□□ -1.62
SHPRH-205ENST00000433355 ATAD2Q6PL18 1390 aa4.92□□□□□ -1.62
SHPRH-205ENST00000433355 USP32Q8NFA0 1604 aa4.92□□□□□ -1.62
SHPRH-205ENST00000433355 ASXL1Q8IXJ9 1541 aa4.92□□□□□ -1.62
SHPRH-205ENST00000433355 KANK4Q5T7N3 995 aaPredicted RBP4.92□□□□□ -1.62
SHPRH-205ENST00000433355 LMOD3Q0VAK6 560 aa4.92□□□□□ -1.62
SHPRH-205ENST00000433355 MRS2Q9HD23 443 aa4.92□□□□□ -1.62
SHPRH-205ENST00000433355 SPHKAPQ2M3C7 1700 aa4.92□□□□□ -1.62
SHPRH-205ENST00000433355 ABCC11Q96J66 1382 aa4.92□□□□□ -1.62
SHPRH-205ENST00000433355 SAMD9LQ8IVG5 1584 aa4.92□□□□□ -1.62
SHPRH-205ENST00000433355 COL17A1Q9UMD9 1497 aaPredicted RBP4.91□□□□□ -1.62
SHPRH-205ENST00000433355 NUDCQ9Y266 331 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 PIK3C2GO75747 1445 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 PPP4R2Q9NY27 417 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 MYH16Q9H6N6 1097 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 ISY1Q9ULR0 285 aaKnown RBP4.91□□□□□ -1.62
SHPRH-205ENST00000433355 GLI2P10070 1586 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 KDM5CP41229 1560 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 FRMPD1Q5SYB0 1578 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 TMC1Q8TDI8 760 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 TERF2IPQ9NYB0 399 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 MAPK8IP3Q9UPT6 1336 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 VGFO15240 615 aaPredicted RBP4.91□□□□□ -1.62
SHPRH-205ENST00000433355 CARD11Q9BXL7 1154 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 CHMP4CQ96CF2 233 aa4.91□□□□□ -1.62
SHPRH-205ENST00000433355 MAGI3Q5TCQ9 1506 aa4.9□□□□□ -1.62
SHPRH-205ENST00000433355 SYCP2Q9BX26 1530 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms