RNA–Protein interactions for RNA: ENST00000432547.7

TTR-202, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-202ENST00000432547 COL9A1P20849 921 aa13.04□□□□□ -0.32
TTR-202ENST00000432547 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
TTR-202ENST00000432547 PROX2Q3B8N5 592 aa13.02□□□□□ -0.33
TTR-202ENST00000432547 WNT2BQ93097 391 aa13.02□□□□□ -0.33
TTR-202ENST00000432547 PPP1R3GB7ZBB8 358 aa13.01□□□□□ -0.33
TTR-202ENST00000432547 CAMK2BQ13554 666 aa13.01□□□□□ -0.33
TTR-202ENST00000432547 PHF14O94880 888 aa12.97□□□□□ -0.33
TTR-202ENST00000432547 GOLGA8CPA6NN73 597 aa12.96□□□□□ -0.33
TTR-202ENST00000432547 IFFO2Q5TF58 517 aa12.96□□□□□ -0.33
TTR-202ENST00000432547 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.33
TTR-202ENST00000432547 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
TTR-202ENST00000432547 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
TTR-202ENST00000432547 DPYSL4O14531 572 aa12.95□□□□□ -0.34
TTR-202ENST00000432547 CC2D2AQ9P2K1 1620 aa12.95□□□□□ -0.34
TTR-202ENST00000432547 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
TTR-202ENST00000432547 EIF4G1Q04637 1599 aaKnown RBP12.92□□□□□ -0.34
TTR-202ENST00000432547 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
TTR-202ENST00000432547 KIAA1468Q9P260 1216 aa12.88□□□□□ -0.35
TTR-202ENST00000432547 A0A0G2JS52 829 aa12.87□□□□□ -0.35
TTR-202ENST00000432547 BCAMP50895 628 aa12.87□□□□□ -0.35
TTR-202ENST00000432547 EPAS1Q99814 870 aa12.87□□□□□ -0.35
TTR-202ENST00000432547 ANKK1Q8NFD2 765 aa12.85□□□□□ -0.35
TTR-202ENST00000432547 LAPTM4BQ86VI4 370 aa12.84□□□□□ -0.35
TTR-202ENST00000432547 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
TTR-202ENST00000432547 DDX12PQ92771 950 aa12.84□□□□□ -0.35
TTR-202ENST00000432547 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
TTR-202ENST00000432547 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
TTR-202ENST00000432547 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
TTR-202ENST00000432547 SEPT9Q9UHD8 586 aaPredicted RBP12.83□□□□□ -0.36
TTR-202ENST00000432547 CECR2Q9BXF3 1484 aa12.83□□□□□ -0.36
TTR-202ENST00000432547 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
TTR-202ENST00000432547 RGS20O76081 388 aa12.81□□□□□ -0.36
TTR-202ENST00000432547 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
TTR-202ENST00000432547 ITGBL1O95965 494 aaPredicted RBP12.8□□□□□ -0.36
TTR-202ENST00000432547 PDIA6Q15084 440 aa12.78□□□□□ -0.36
TTR-202ENST00000432547 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
TTR-202ENST00000432547 WBP1LQ9NX94 342 aa12.77□□□□□ -0.37
TTR-202ENST00000432547 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
TTR-202ENST00000432547 PRIM1P49642 420 aaKnown RBP12.75□□□□□ -0.37
TTR-202ENST00000432547 TSKSQ9UJT2 592 aa12.75□□□□□ -0.37
TTR-202ENST00000432547 NBR1Q14596 966 aa12.74□□□□□ -0.37
TTR-202ENST00000432547 FAM98CQ17RN3 349 aaKnown RBP12.74□□□□□ -0.37
TTR-202ENST00000432547 FAM198AQ9UFP1 575 aa12.7□□□□□ -0.38
TTR-202ENST00000432547 C3orf80F5H4A9 247 aa12.69□□□□□ -0.38
TTR-202ENST00000432547 MAP3K7O43318 606 aa12.69□□□□□ -0.38
TTR-202ENST00000432547 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
TTR-202ENST00000432547 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
TTR-202ENST00000432547 SPDYE16A6NNV3 312 aaPredicted RBP12.67□□□□□ -0.38
TTR-202ENST00000432547 IRX2Q9BZI1 471 aaPredicted RBP12.67□□□□□ -0.38
TTR-202ENST00000432547 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
TTR-202ENST00000432547 TSR3Q9UJK0 312 aaKnown RBP12.66□□□□□ -0.38
TTR-202ENST00000432547 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
TTR-202ENST00000432547 ARIH1Q9Y4X5 557 aaPredicted RBP12.66□□□□□ -0.38
TTR-202ENST00000432547 LRCH3Q96II8 777 aa12.65□□□□□ -0.38
TTR-202ENST00000432547 E2F4Q16254 413 aa12.64□□□□□ -0.39
TTR-202ENST00000432547 SMAPO00193 183 aa12.63□□□□□ -0.39
TTR-202ENST00000432547 KCNC4Q03721 635 aa12.63□□□□□ -0.39
TTR-202ENST00000432547 PACS2Q86VP3 889 aa12.63□□□□□ -0.39
TTR-202ENST00000432547 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
TTR-202ENST00000432547 PRSS12P56730 875 aa12.61□□□□□ -0.39
TTR-202ENST00000432547 CDHR5Q9HBB8 845 aa12.6□□□□□ -0.39
TTR-202ENST00000432547 GRXCR2A6NFK2 248 aa12.59□□□□□ -0.39
TTR-202ENST00000432547 OSBPP22059 807 aa12.59□□□□□ -0.39
TTR-202ENST00000432547 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
TTR-202ENST00000432547 PAXIP1Q6ZW49 1069 aaPredicted RBP12.57□□□□□ -0.4
TTR-202ENST00000432547 SAMD7Q7Z3H4 446 aa12.57□□□□□ -0.4
TTR-202ENST00000432547 TATDN2Q93075 761 aa12.55□□□□□ -0.4
TTR-202ENST00000432547 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
TTR-202ENST00000432547 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
TTR-202ENST00000432547 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
TTR-202ENST00000432547 PPP4CP60510 307 aa12.53□□□□□ -0.4
TTR-202ENST00000432547 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
TTR-202ENST00000432547 PNMA3Q9UL41 463 aa12.52□□□□□ -0.41
TTR-202ENST00000432547 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
TTR-202ENST00000432547 NPDC1Q9NQX5 325 aaPredicted RBP12.5□□□□□ -0.41
TTR-202ENST00000432547 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
TTR-202ENST00000432547 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
TTR-202ENST00000432547 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
TTR-202ENST00000432547 TTC13Q8NBP0 860 aa12.49□□□□□ -0.41
TTR-202ENST00000432547 NUDT18Q6ZVK8 323 aa12.48□□□□□ -0.41
TTR-202ENST00000432547 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
TTR-202ENST00000432547 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
TTR-202ENST00000432547 NCAPD3P42695 1498 aa12.46□□□□□ -0.41
TTR-202ENST00000432547 MTRQ99707 1265 aa12.46□□□□□ -0.41
TTR-202ENST00000432547 SMARCA2P51531 1590 aa12.44□□□□□ -0.42
TTR-202ENST00000432547 HMGXB3Q12766 1538 aa12.44□□□□□ -0.42
TTR-202ENST00000432547 LCE2BO14633 110 aa12.44□□□□□ -0.42
TTR-202ENST00000432547 APLP1P51693 650 aa12.44□□□□□ -0.42
TTR-202ENST00000432547 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
TTR-202ENST00000432547 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
TTR-202ENST00000432547 PADI6Q6TGC4 694 aa12.43□□□□□ -0.42
TTR-202ENST00000432547 Q6ZNB5 142 aa12.41□□□□□ -0.42
TTR-202ENST00000432547 IL21Q9HBE4 155 aa12.41□□□□□ -0.42
TTR-202ENST00000432547 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
TTR-202ENST00000432547 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
TTR-202ENST00000432547 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
TTR-202ENST00000432547 PPP1R18Q6NYC8 613 aa12.38□□□□□ -0.43
TTR-202ENST00000432547 RNF40O75150 1001 aa12.37□□□□□ -0.43
TTR-202ENST00000432547 MLLT3P42568 568 aaPredicted RBP12.37□□□□□ -0.43
TTR-202ENST00000432547 EYA1Q99502 592 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms