RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 PREX1Q8TCU6 1659 aa9.4□□□□□ -0.91
NIPAL3-205ENST00000432012 WDR70Q9NW82 654 aa9.4□□□□□ -0.91
NIPAL3-205ENST00000432012 ARID4BQ4LE39 1312 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-205ENST00000432012 PDIA4P13667 645 aaKnown RBP9.36□□□□□ -0.91
NIPAL3-205ENST00000432012 FANCAO15360 1455 aa9.36□□□□□ -0.91
NIPAL3-205ENST00000432012 ZBTB7CA1YPR0 619 aa9.35□□□□□ -0.91
NIPAL3-205ENST00000432012 IQGAP2Q13576 1575 aa9.35□□□□□ -0.91
NIPAL3-205ENST00000432012 MED1Q15648 1581 aaPredicted RBP9.35□□□□□ -0.91
NIPAL3-205ENST00000432012 TTC37Q6PGP7 1564 aa9.35□□□□□ -0.91
NIPAL3-205ENST00000432012 NEO1Q92859 1461 aa9.35□□□□□ -0.91
NIPAL3-205ENST00000432012 NUBP1P53384 320 aa9.35□□□□□ -0.91
NIPAL3-205ENST00000432012 DHX37Q8IY37 1157 aaKnown RBP9.35□□□□□ -0.91
NIPAL3-205ENST00000432012 ARHGEF40Q8TER5 1519 aa9.35□□□□□ -0.91
NIPAL3-205ENST00000432012 LTBP4Q8N2S1 1624 aa9.34□□□□□ -0.91
NIPAL3-205ENST00000432012 STRCQ7RTU9 1775 aa9.34□□□□□ -0.91
NIPAL3-205ENST00000432012 TESPA1A2RU30 521 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-205ENST00000432012 DCAF8Q5TAQ9 597 aa9.33□□□□□ -0.92
NIPAL3-205ENST00000432012 VGFO15240 615 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-205ENST00000432012 KDM4CQ9H3R0 1056 aa9.33□□□□□ -0.92
NIPAL3-205ENST00000432012 CCDC82Q8N4S0 544 aa9.32□□□□□ -0.92
NIPAL3-205ENST00000432012 FER1L4A9Z1Z3 1794 aa9.31□□□□□ -0.92
NIPAL3-205ENST00000432012 DISP1Q96F81 1524 aa9.3□□□□□ -0.92
NIPAL3-205ENST00000432012 AKNAQ7Z591 1439 aa9.3□□□□□ -0.92
NIPAL3-205ENST00000432012 CDK11BP21127 795 aaKnown RBP9.3□□□□□ -0.92
NIPAL3-205ENST00000432012 ZBTB47Q9UFB7 747 aaPredicted RBP9.3□□□□□ -0.92
NIPAL3-205ENST00000432012 CDK11AQ9UQ88 783 aaPredicted RBP9.3□□□□□ -0.92
NIPAL3-205ENST00000432012 CLEC11AQ9Y240 323 aa9.3□□□□□ -0.92
NIPAL3-205ENST00000432012 UHRF1BP1Q6BDS2 1440 aa9.29□□□□□ -0.92
NIPAL3-205ENST00000432012 UGGT2Q9NYU1 1516 aa9.29□□□□□ -0.92
NIPAL3-205ENST00000432012 GSE1Q14687 1217 aa9.29□□□□□ -0.92
NIPAL3-205ENST00000432012 ABCA9Q8IUA7 1624 aa9.28□□□□□ -0.92
NIPAL3-205ENST00000432012 ZEB1P37275 1124 aaPredicted RBP9.28□□□□□ -0.92
NIPAL3-205ENST00000432012 FOXD4L5Q5VV16 416 aaPredicted RBP9.28□□□□□ -0.92
NIPAL3-205ENST00000432012 FOXD4L4Q8WXT5 416 aaPredicted RBP9.28□□□□□ -0.92
NIPAL3-205ENST00000432012 FRMPD1Q5SYB0 1578 aa9.28□□□□□ -0.92
NIPAL3-205ENST00000432012 KCTD17Q8N5Z5 321 aa9.27□□□□□ -0.92
NIPAL3-205ENST00000432012 IGF1RP08069 1367 aa9.27□□□□□ -0.93
NIPAL3-205ENST00000432012 EFCAB5A4FU69 1503 aa9.27□□□□□ -0.93
NIPAL3-205ENST00000432012 SETD1BQ9UPS6 1966 aaKnown RBP9.27□□□□□ -0.93
NIPAL3-205ENST00000432012 CLUAP1Q96AJ1 413 aa9.27□□□□□ -0.93
NIPAL3-205ENST00000432012 KCNH8Q96L42 1107 aa9.27□□□□□ -0.93
NIPAL3-205ENST00000432012 UBAP1LF5GYI3 381 aa9.26□□□□□ -0.93
NIPAL3-205ENST00000432012 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
NIPAL3-205ENST00000432012 KIAA0556O60303 1618 aa9.26□□□□□ -0.93
NIPAL3-205ENST00000432012 MAGI2Q86UL8 1455 aa9.26□□□□□ -0.93
NIPAL3-205ENST00000432012 KIF27Q86VH2 1401 aa9.26□□□□□ -0.93
NIPAL3-205ENST00000432012 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
NIPAL3-205ENST00000432012 BARGINQ6ZT62 677 aa9.25□□□□□ -0.93
NIPAL3-205ENST00000432012 CFAP74Q9C0B2 1584 aa9.25□□□□□ -0.93
NIPAL3-205ENST00000432012 PYGBP11216 843 aa9.25□□□□□ -0.93
NIPAL3-205ENST00000432012 FAM9AQ8IZU1 332 aaPredicted RBP9.25□□□□□ -0.93
NIPAL3-205ENST00000432012 ZMYM4Q5VZL5 1548 aa9.24□□□□□ -0.93
NIPAL3-205ENST00000432012 RAD21O60216 631 aa9.24□□□□□ -0.93
NIPAL3-205ENST00000432012 RAPGEF3O95398 923 aa9.24□□□□□ -0.93
NIPAL3-205ENST00000432012 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
NIPAL3-205ENST00000432012 FHOD3Q2V2M9 1422 aa9.24□□□□□ -0.93
NIPAL3-205ENST00000432012 ABCA8O94911 1581 aa9.23□□□□□ -0.93
NIPAL3-205ENST00000432012 DENND4BO75064 1496 aaPredicted RBP9.23□□□□□ -0.93
NIPAL3-205ENST00000432012 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
NIPAL3-205ENST00000432012 MTMR7Q9Y216 660 aa9.23□□□□□ -0.93
NIPAL3-205ENST00000432012 E2F4Q16254 413 aa9.22□□□□□ -0.93
NIPAL3-205ENST00000432012 ZFYVE16Q7Z3T8 1539 aa9.22□□□□□ -0.93
NIPAL3-205ENST00000432012 RICTORQ6R327 1708 aa9.22□□□□□ -0.93
NIPAL3-205ENST00000432012 CARMIL1Q5VZK9 1371 aa9.22□□□□□ -0.93
NIPAL3-205ENST00000432012 GOLGA3Q08378 1498 aa9.21□□□□□ -0.93
NIPAL3-205ENST00000432012 PPP1R37O75864 691 aa9.21□□□□□ -0.94
NIPAL3-205ENST00000432012 AEBP1Q8IUX7 1158 aa9.21□□□□□ -0.94
NIPAL3-205ENST00000432012 RBM25P49756 843 aaKnown RBP9.2□□□□□ -0.94
NIPAL3-205ENST00000432012 NCOA1Q15788 1441 aa9.19□□□□□ -0.94
NIPAL3-205ENST00000432012 RYDENQ9NUL5 291 aaKnown RBP9.19□□□□□ -0.94
NIPAL3-205ENST00000432012 AK7Q96M32 723 aa9.18□□□□□ -0.94
NIPAL3-205ENST00000432012 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
NIPAL3-205ENST00000432012 PDE4DQ08499 809 aa9.18□□□□□ -0.94
NIPAL3-205ENST00000432012 REM2Q8IYK8 340 aaPredicted RBP9.18□□□□□ -0.94
NIPAL3-205ENST00000432012 RASEFQ8IZ41 740 aa9.18□□□□□ -0.94
NIPAL3-205ENST00000432012 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
NIPAL3-205ENST00000432012 PRR29P0C7W0 189 aa9.18□□□□□ -0.94
NIPAL3-205ENST00000432012 SPDYE1Q8NFV5 336 aaPredicted RBP9.18□□□□□ -0.94
NIPAL3-205ENST00000432012 TOM1O60784 492 aa9.17□□□□□ -0.94
NIPAL3-205ENST00000432012 PLEKHG3A1L390 1219 aa9.17□□□□□ -0.94
NIPAL3-205ENST00000432012 TRIM66O15016 1216 aa9.17□□□□□ -0.94
NIPAL3-205ENST00000432012 HSPA1LP34931 641 aa9.17□□□□□ -0.94
NIPAL3-205ENST00000432012 MLLT3P42568 568 aaPredicted RBP9.16□□□□□ -0.94
NIPAL3-205ENST00000432012 ZNF316A6NFI3 1004 aaPredicted RBP9.16□□□□□ -0.94
NIPAL3-205ENST00000432012 KRI1Q8N9T8 703 aaKnown RBP9.16□□□□□ -0.94
NIPAL3-205ENST00000432012 RGS22Q8NE09 1264 aa9.15□□□□□ -0.94
NIPAL3-205ENST00000432012 AKT1S1Q96B36 256 aa9.15□□□□□ -0.94
NIPAL3-205ENST00000432012 C9orf84Q5VXU9 1444 aa9.15□□□□□ -0.95
NIPAL3-205ENST00000432012 MFRPQ9BY79 579 aa9.15□□□□□ -0.95
NIPAL3-205ENST00000432012 ONECUT3O60422 494 aaPredicted RBP9.14□□□□□ -0.95
NIPAL3-205ENST00000432012 ATP10AO60312 1499 aa9.14□□□□□ -0.95
NIPAL3-205ENST00000432012 TRAPPC8Q9Y2L5 1435 aa9.13□□□□□ -0.95
NIPAL3-205ENST00000432012 CPS1P31327 1500 aa9.13□□□□□ -0.95
NIPAL3-205ENST00000432012 SGIP1Q9BQI5 828 aa9.12□□□□□ -0.95
NIPAL3-205ENST00000432012 RBM42Q9BTD8 480 aaKnown RBP9.12□□□□□ -0.95
NIPAL3-205ENST00000432012 PTPRKQ15262 1439 aa9.12□□□□□ -0.95
NIPAL3-205ENST00000432012 SIGLEC1Q9BZZ2 1709 aa9.12□□□□□ -0.95
NIPAL3-205ENST00000432012 MLECQ14165 292 aa9.12□□□□□ -0.95
NIPAL3-205ENST00000432012 FAM212AQ96EL1 285 aa9.12□□□□□ -0.95
NIPAL3-205ENST00000432012 ZNF777Q9ULD5 760 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms