RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 KDM5DQ9BY66 1539 aa22.51■■□□□ 1.19
SMARCE1-205ENST00000431889 DNMT1P26358 1616 aaKnown RBP22.51■■□□□ 1.19
SMARCE1-205ENST00000431889 RSPH4AQ5TD94 716 aa22.5■■□□□ 1.19
SMARCE1-205ENST00000431889 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
SMARCE1-205ENST00000431889 TNRQ92752 1358 aa22.49■■□□□ 1.19
SMARCE1-205ENST00000431889 A2ML1A8K2U0 1454 aa22.48■■□□□ 1.19
SMARCE1-205ENST00000431889 MYOM3Q5VTT5 1437 aa22.47■■□□□ 1.19
SMARCE1-205ENST00000431889 TCOF1Q13428 1488 aaKnown RBP22.46■■□□□ 1.19
SMARCE1-205ENST00000431889 CFAP65Q6ZU64 1925 aaKnown RBP22.46■■□□□ 1.19
SMARCE1-205ENST00000431889 PZPP20742 1482 aa22.46■■□□□ 1.19
SMARCE1-205ENST00000431889 PLA2R1Q13018 1463 aa22.46■■□□□ 1.19
SMARCE1-205ENST00000431889 PKD2Q13563 968 aa22.45■■□□□ 1.18
SMARCE1-205ENST00000431889 MAP3K1Q13233 1512 aa22.44■■□□□ 1.18
SMARCE1-205ENST00000431889 MAST1Q9Y2H9 1570 aa22.43■■□□□ 1.18
SMARCE1-205ENST00000431889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
SMARCE1-205ENST00000431889 CEP152O94986 1710 aa22.42■■□□□ 1.18
SMARCE1-205ENST00000431889 POLR1AO95602 1720 aaPredicted RBP22.41■■□□□ 1.18
SMARCE1-205ENST00000431889 APLP2Q06481 763 aa22.41■■□□□ 1.18
SMARCE1-205ENST00000431889 RNF17Q9BXT8 1623 aaKnown RBP22.4■■□□□ 1.18
SMARCE1-205ENST00000431889 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
SMARCE1-205ENST00000431889 ABCC3O15438 1527 aa22.4■■□□□ 1.18
SMARCE1-205ENST00000431889 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
SMARCE1-205ENST00000431889 NEURL4Q96JN8 1562 aa22.39■■□□□ 1.18
SMARCE1-205ENST00000431889 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.17
SMARCE1-205ENST00000431889 UBAP1LF5GYI3 381 aa22.38■■□□□ 1.17
SMARCE1-205ENST00000431889 MROH1Q8NDA8 1641 aa22.38■■□□□ 1.17
SMARCE1-205ENST00000431889 DISP3Q9P2K9 1392 aa22.37■■□□□ 1.17
SMARCE1-205ENST00000431889 ABCC5O15440 1437 aa22.36■■□□□ 1.17
SMARCE1-205ENST00000431889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.36■■□□□ 1.172e-15■■■□□ 14.6
SMARCE1-205ENST00000431889 CHIC2Q9UKJ5 165 aa22.36■■□□□ 1.17
SMARCE1-205ENST00000431889 CROCC2H7BZ55 1655 aa22.36■■□□□ 1.17
SMARCE1-205ENST00000431889 UGGT1Q9NYU2 1555 aa22.35■■□□□ 1.17
SMARCE1-205ENST00000431889 EIF2AK4Q9P2K8 1649 aaKnown RBP22.35■■□□□ 1.17
SMARCE1-205ENST00000431889 FAM135AQ9P2D6 1515 aa22.33■■□□□ 1.17
SMARCE1-205ENST00000431889 KIF15Q9NS87 1388 aa22.33■■□□□ 1.17
SMARCE1-205ENST00000431889 ZC3H13Q5T200 1668 aaKnown RBP22.33■■□□□ 1.16
SMARCE1-205ENST00000431889 DUOX2Q9NRD8 1548 aa22.32■■□□□ 1.16
SMARCE1-205ENST00000431889 ANKLE2Q86XL3 938 aa22.32■■□□□ 1.16
SMARCE1-205ENST00000431889 IQSEC2Q5JU85 1478 aa22.32■■□□□ 1.16
SMARCE1-205ENST00000431889 ILDR2Q71H61 639 aa22.31■■□□□ 1.16
SMARCE1-205ENST00000431889 THEMISQ8N1K5 641 aaPredicted RBP22.31■■□□□ 1.16
SMARCE1-205ENST00000431889 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
SMARCE1-205ENST00000431889 ERVK-7P63135 1459 aa22.31■■□□□ 1.16
SMARCE1-205ENST00000431889 DAPK1P53355 1430 aa22.3■■□□□ 1.16
SMARCE1-205ENST00000431889 NLRP1Q9C000 1473 aa22.3■■□□□ 1.16
SMARCE1-205ENST00000431889 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
SMARCE1-205ENST00000431889 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
SMARCE1-205ENST00000431889 PIP4K2BP78356 416 aa22.29■■□□□ 1.16
SMARCE1-205ENST00000431889 NPHP4O75161 1426 aaPredicted RBP22.27■■□□□ 1.15
SMARCE1-205ENST00000431889 SHANK2Q9UPX8 1470 aa22.26■■□□□ 1.15
SMARCE1-205ENST00000431889 VWDEQ8N2E2 1590 aa22.24■■□□□ 1.15
SMARCE1-205ENST00000431889 IQGAP1P46940 1657 aa22.24■■□□□ 1.15
SMARCE1-205ENST00000431889 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
SMARCE1-205ENST00000431889 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
SMARCE1-205ENST00000431889 UBR1Q8IWV7 1749 aa22.23■■□□□ 1.15
SMARCE1-205ENST00000431889 PRDM15P57071 1507 aaPredicted RBP22.22■■□□□ 1.15
SMARCE1-205ENST00000431889 STRCP1A6NGW2 1772 aa22.22■■□□□ 1.15
SMARCE1-205ENST00000431889 ERBINQ96RT1 1412 aa22.21■■□□□ 1.15
SMARCE1-205ENST00000431889 DEPDC5O75140 1603 aa22.21■■□□□ 1.15
SMARCE1-205ENST00000431889 MED14O60244 1454 aa22.18■■□□□ 1.14
SMARCE1-205ENST00000431889 CPS1P31327 1500 aa22.18■■□□□ 1.14
SMARCE1-205ENST00000431889 LTKP29376 864 aa22.17■■□□□ 1.14
SMARCE1-205ENST00000431889 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
SMARCE1-205ENST00000431889 PIK3C2BO00750 1634 aa22.17■■□□□ 1.14
SMARCE1-205ENST00000431889 ANKRD30AQ9BXX3 1397 aa22.17■■□□□ 1.14
SMARCE1-205ENST00000431889 HSPA1LP34931 641 aa22.16■■□□□ 1.14
SMARCE1-205ENST00000431889 TXNDC2Q86VQ3 553 aa22.14■■□□□ 1.13
SMARCE1-205ENST00000431889 KANK1Q14678 1352 aa22.14■■□□□ 1.13
SMARCE1-205ENST00000431889 TOM1O60784 492 aa22.12■■□□□ 1.13
SMARCE1-205ENST00000431889 STAG3Q9UJ98 1225 aa22.12■■□□□ 1.13
SMARCE1-205ENST00000431889 SCAF11Q99590 1463 aaKnown RBP22.12■■□□□ 1.13
SMARCE1-205ENST00000431889 ARHGAP31Q2M1Z3 1444 aa22.11■■□□□ 1.13
SMARCE1-205ENST00000431889 ALKQ9UM73 1620 aa22.1■■□□□ 1.13
SMARCE1-205ENST00000431889 IDI1Q13907 227 aa22.09■■□□□ 1.13
SMARCE1-205ENST00000431889 LRRC7Q96NW7 1537 aa22.09■■□□□ 1.13
SMARCE1-205ENST00000431889 SYNMO15061 1565 aa22.09■■□□□ 1.13
SMARCE1-205ENST00000431889 ARHGAP23Q9P227 1491 aa22.07■■□□□ 1.12
SMARCE1-205ENST00000431889 SLIT1O75093 1534 aa22.06■■□□□ 1.12
SMARCE1-205ENST00000431889 ITGAEP38570 1179 aa22.06■■□□□ 1.12
SMARCE1-205ENST00000431889 EID1Q9Y6B2 187 aa22.05■■□□□ 1.12
SMARCE1-205ENST00000431889 ADGRL2O95490 1459 aa22.05■■□□□ 1.12
SMARCE1-205ENST00000431889 EFCAB6Q5THR3 1501 aa22.04■■□□□ 1.12
SMARCE1-205ENST00000431889 LMTK2Q8IWU2 1503 aa22.04■■□□□ 1.12
SMARCE1-205ENST00000431889 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
SMARCE1-205ENST00000431889 TMEM2Q9UHN6 1383 aa22.03■■□□□ 1.12
SMARCE1-205ENST00000431889 SLC26A8Q96RN1 970 aa22.03■■□□□ 1.12
SMARCE1-205ENST00000431889 ANKRD50Q9ULJ7 1429 aa22.03■■□□□ 1.12
SMARCE1-205ENST00000431889 XIRP1Q702N8 1843 aaKnown RBP22.02■■□□□ 1.12
SMARCE1-205ENST00000431889 MYO5BQ9ULV0 1848 aa22.01■■□□□ 1.11
SMARCE1-205ENST00000431889 SOCS7O14512 581 aa22.01■■□□□ 1.11
SMARCE1-205ENST00000431889 BCANQ96GW7 911 aa21.99■■□□□ 1.11
SMARCE1-205ENST00000431889 NOS1P29475 1434 aa21.98■■□□□ 1.11
SMARCE1-205ENST00000431889 MED1Q15648 1581 aaPredicted RBP21.98■■□□□ 1.11
SMARCE1-205ENST00000431889 ADGRB3O60242 1522 aa21.96■■□□□ 1.11
SMARCE1-205ENST00000431889 CHGAP10645 457 aaKnown RBP21.95■■□□□ 1.1
SMARCE1-205ENST00000431889 NUTM2DQ5VT03 806 aaPredicted RBP21.95■■□□□ 1.1
SMARCE1-205ENST00000431889 GCC2Q8IWJ2 1684 aa21.94■■□□□ 1.1
SMARCE1-205ENST00000431889 TET3O43151 1660 aa21.93■■□□□ 1.1
SMARCE1-205ENST00000431889 KDM5AP29375 1690 aaKnown RBP21.92■■□□□ 1.1
SMARCE1-205ENST00000431889 UNC13BO14795 1591 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms