RNA–Protein interactions for RNA: ENST00000431556.6

YIF1A-204, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-204ENST00000431556 LMTK3Q96Q04 1460 aa24.12■■□□□ 1.45
YIF1A-204ENST00000431556 PTPRKQ15262 1439 aa24.11■■□□□ 1.45
YIF1A-204ENST00000431556 NCOA1Q15788 1441 aa24.1■■□□□ 1.45
YIF1A-204ENST00000431556 ZMYM3Q14202 1370 aa24.09■■□□□ 1.45
YIF1A-204ENST00000431556 MROH1Q8NDA8 1641 aa24.09■■□□□ 1.45
YIF1A-204ENST00000431556 KDM5DQ9BY66 1539 aa24.09■■□□□ 1.45
YIF1A-204ENST00000431556 ERBINQ96RT1 1412 aa24.09■■□□□ 1.45
YIF1A-204ENST00000431556 PPP6R1Q9UPN7 881 aa24.07■■□□□ 1.44
YIF1A-204ENST00000431556 PREX1Q8TCU6 1659 aa24.07■■□□□ 1.44
YIF1A-204ENST00000431556 RRBP1Q9P2E9 1410 aaKnown RBP24.07■■□□□ 1.44
YIF1A-204ENST00000431556 FAM135AQ9P2D6 1515 aa24.05■■□□□ 1.44
YIF1A-204ENST00000431556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.05■■□□□ 1.443e-8■■■■□ 19.8
YIF1A-204ENST00000431556 ITGAEP38570 1179 aa24.04■■□□□ 1.44
YIF1A-204ENST00000431556 ABCC3O15438 1527 aa24.02■■□□□ 1.44
YIF1A-204ENST00000431556 WASHC2CQ9Y4E1 1318 aa24.02■■□□□ 1.44
YIF1A-204ENST00000431556 CEP152O94986 1710 aa24.01■■□□□ 1.43
YIF1A-204ENST00000431556 PRDM15P57071 1507 aaPredicted RBP24.01■■□□□ 1.43
YIF1A-204ENST00000431556 ZC3H13Q5T200 1668 aaKnown RBP24.01■■□□□ 1.43
YIF1A-204ENST00000431556 SETD1BQ9UPS6 1966 aaKnown RBP24■■□□□ 1.43
YIF1A-204ENST00000431556 DEPDC5O75140 1603 aa24■■□□□ 1.43
YIF1A-204ENST00000431556 NPATQ14207 1427 aa24■■□□□ 1.43
YIF1A-204ENST00000431556 UHRF1BP1Q6BDS2 1440 aa24■■□□□ 1.43
YIF1A-204ENST00000431556 HSPA2P54652 639 aa23.99■■□□□ 1.43
YIF1A-204ENST00000431556 ROCK1Q13464 1354 aa23.97■■□□□ 1.43
YIF1A-204ENST00000431556 PZPP20742 1482 aa23.96■■□□□ 1.43
YIF1A-204ENST00000431556 ANKRD50Q9ULJ7 1429 aa23.96■■□□□ 1.43
YIF1A-204ENST00000431556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.95■■□□□ 1.42
YIF1A-204ENST00000431556 CAMSAP1Q5T5Y3 1602 aa23.95■■□□□ 1.42
YIF1A-204ENST00000431556 MYO3AQ8NEV4 1616 aa23.94■■□□□ 1.42
YIF1A-204ENST00000431556 FBXO31Q5XUX0 539 aaPredicted RBP23.93■■□□□ 1.42
YIF1A-204ENST00000431556 VWDEQ8N2E2 1590 aa23.91■■□□□ 1.42
YIF1A-204ENST00000431556 KANK1Q14678 1352 aa23.89■■□□□ 1.41
YIF1A-204ENST00000431556 ZNF142P52746 1687 aaPredicted RBP23.89■■□□□ 1.41
YIF1A-204ENST00000431556 TNRQ92752 1358 aa23.87■■□□□ 1.41
YIF1A-204ENST00000431556 UNC13BO14795 1591 aa23.86■■□□□ 1.41
YIF1A-204ENST00000431556 CEP170BQ9Y4F5 1589 aaPredicted RBP23.86■■□□□ 1.41
YIF1A-204ENST00000431556 LMTK2Q8IWU2 1503 aa23.85■■□□□ 1.41
YIF1A-204ENST00000431556 ERVK-7P63135 1459 aa23.85■■□□□ 1.41
YIF1A-204ENST00000431556 CFAP65Q6ZU64 1925 aaKnown RBP23.84■■□□□ 1.41
YIF1A-204ENST00000431556 SPATA31D1Q6ZQQ2 1576 aa23.84■■□□□ 1.41
YIF1A-204ENST00000431556 ARHGAP31Q2M1Z3 1444 aa23.82■■□□□ 1.4
YIF1A-204ENST00000431556 STRCQ7RTU9 1775 aa23.81■■□□□ 1.4
YIF1A-204ENST00000431556 EFCAB6Q5THR3 1501 aa23.81■■□□□ 1.4
YIF1A-204ENST00000431556 GCC2Q8IWJ2 1684 aa23.81■■□□□ 1.4
YIF1A-204ENST00000431556 A2ML1A8K2U0 1454 aa23.81■■□□□ 1.4
YIF1A-204ENST00000431556 NAIPQ13075 1403 aa23.79■■□□□ 1.4
YIF1A-204ENST00000431556 TET3O43151 1660 aa23.76■■□□□ 1.39
YIF1A-204ENST00000431556 NLRP1Q9C000 1473 aa23.76■■□□□ 1.39
YIF1A-204ENST00000431556 IQGAP3Q86VI3 1631 aa23.76■■□□□ 1.39
YIF1A-204ENST00000431556 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
YIF1A-204ENST00000431556 SYNMO15061 1565 aa23.71■■□□□ 1.39
YIF1A-204ENST00000431556 UGGT1Q9NYU2 1555 aa23.71■■□□□ 1.39
YIF1A-204ENST00000431556 NUP155O75694 1391 aa23.71■■□□□ 1.39
YIF1A-204ENST00000431556 PLA2R1Q13018 1463 aa23.7■■□□□ 1.38
YIF1A-204ENST00000431556 E9PCH4 1651 aa23.69■■□□□ 1.38
YIF1A-204ENST00000431556 RPRD2Q5VT52 1461 aaKnown RBP23.68■■□□□ 1.38
YIF1A-204ENST00000431556 NOS1P29475 1434 aa23.67■■□□□ 1.38
YIF1A-204ENST00000431556 NCKAP5LQ9HCH0 1330 aa23.67■■□□□ 1.38
YIF1A-204ENST00000431556 UBR1Q8IWV7 1749 aa23.66■■□□□ 1.38
YIF1A-204ENST00000431556 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
YIF1A-204ENST00000431556 PTPRTO14522 1441 aa23.63■■□□□ 1.37
YIF1A-204ENST00000431556 POLR1AO95602 1720 aaPredicted RBP23.63■■□□□ 1.37
YIF1A-204ENST00000431556 THEMISQ8N1K5 641 aaPredicted RBP23.61■■□□□ 1.37
YIF1A-204ENST00000431556 DMRT2Q9Y5R5 561 aa23.61■■□□□ 1.37
YIF1A-204ENST00000431556 NEURL4Q96JN8 1562 aa23.61■■□□□ 1.37
YIF1A-204ENST00000431556 PKD2Q13563 968 aa23.6■■□□□ 1.37
YIF1A-204ENST00000431556 IDI1Q13907 227 aa23.59■■□□□ 1.37
YIF1A-204ENST00000431556 TRIM52Q96A61 297 aa23.57■■□□□ 1.36
YIF1A-204ENST00000431556 ADGRB3O60242 1522 aa23.56■■□□□ 1.36
YIF1A-204ENST00000431556 KDM5AP29375 1690 aaKnown RBP23.55■■□□□ 1.36
YIF1A-204ENST00000431556 SPHKAPQ2M3C7 1700 aa23.54■■□□□ 1.36
YIF1A-204ENST00000431556 ANKLE2Q86XL3 938 aa23.54■■□□□ 1.36
YIF1A-204ENST00000431556 SLC52A1Q9NWF4 448 aa23.53■■□□□ 1.36
YIF1A-204ENST00000431556 STAG3Q9UJ98 1225 aa23.53■■□□□ 1.36
YIF1A-204ENST00000431556 ARHGAP23Q9P227 1491 aa23.53■■□□□ 1.36
YIF1A-204ENST00000431556 SLIT1O75093 1534 aa23.53■■□□□ 1.36
YIF1A-204ENST00000431556 MYO5BQ9ULV0 1848 aa23.52■■□□□ 1.36
YIF1A-204ENST00000431556 SETD5Q9C0A6 1442 aa23.51■■□□□ 1.35
YIF1A-204ENST00000431556 TMEM2Q9UHN6 1383 aa23.49■■□□□ 1.35
YIF1A-204ENST00000431556 NPHP4O75161 1426 aaPredicted RBP23.49■■□□□ 1.35
YIF1A-204ENST00000431556 MED14O60244 1454 aa23.49■■□□□ 1.35
YIF1A-204ENST00000431556 SCAF11Q99590 1463 aaKnown RBP23.49■■□□□ 1.35
YIF1A-204ENST00000431556 TMEM131LA2VDJ0 1609 aa23.48■■□□□ 1.35
YIF1A-204ENST00000431556 IQGAP1P46940 1657 aa23.48■■□□□ 1.35
YIF1A-204ENST00000431556 LTKP29376 864 aa23.48■■□□□ 1.35
YIF1A-204ENST00000431556 SLC4A1APQ9BWU0 796 aaKnown RBP23.47■■□□□ 1.35
YIF1A-204ENST00000431556 RAB3GAP2Q9H2M9 1393 aa23.45■■□□□ 1.34
YIF1A-204ENST00000431556 LTBP4Q8N2S1 1624 aa23.44■■□□□ 1.34
YIF1A-204ENST00000431556 TRPM2O94759 1503 aa23.44■■□□□ 1.34
YIF1A-204ENST00000431556 ZNF335Q9H4Z2 1342 aaPredicted RBP23.44■■□□□ 1.34
YIF1A-204ENST00000431556 TXNDC2Q86VQ3 553 aa23.44■■□□□ 1.34
YIF1A-204ENST00000431556 CLTCL1P53675 1640 aa23.44■■□□□ 1.34
YIF1A-204ENST00000431556 CHGAP10645 457 aaKnown RBP23.43■■□□□ 1.34
YIF1A-204ENST00000431556 EID1Q9Y6B2 187 aa23.41■■□□□ 1.34
YIF1A-204ENST00000431556 FOXD1Q16676 465 aa23.4■■□□□ 1.34
YIF1A-204ENST00000431556 CERKQ8TCT0 537 aa23.4■■□□□ 1.34
YIF1A-204ENST00000431556 ZFYVE9O95405 1425 aa23.4■■□□□ 1.34
YIF1A-204ENST00000431556 RIMS2Q9UQ26 1411 aa23.39■■□□□ 1.33
YIF1A-204ENST00000431556 MPHOSPH9Q99550 1183 aa23.37■■□□□ 1.33
YIF1A-204ENST00000431556 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 1100.6 ms