RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 ZNF335Q9H4Z2 1342 aaPredicted RBP24.16■■□□□ 1.46
RPL28-204ENST00000431533 FAM135AQ9P2D6 1515 aa24.16■■□□□ 1.46
RPL28-204ENST00000431533 TSPY4P0CV99 314 aa24.16■■□□□ 1.46
RPL28-204ENST00000431533 TSPY10P0CW01 314 aa24.16■■□□□ 1.46
RPL28-204ENST00000431533 UBAP1LF5GYI3 381 aa24.14■■□□□ 1.45
RPL28-204ENST00000431533 WASHC2CQ9Y4E1 1318 aa24.13■■□□□ 1.45
RPL28-204ENST00000431533 TNRQ92752 1358 aa24.12■■□□□ 1.45
RPL28-204ENST00000431533 CAMSAP2Q08AD1 1489 aa24.12■■□□□ 1.45
RPL28-204ENST00000431533 MAP3K1Q13233 1512 aa24.11■■□□□ 1.45
RPL28-204ENST00000431533 KANK4Q5T7N3 995 aaPredicted RBP24.11■■□□□ 1.45
RPL28-204ENST00000431533 APLP2Q06481 763 aa24.1■■□□□ 1.45
RPL28-204ENST00000431533 SPATA31D1Q6ZQQ2 1576 aa24.1■■□□□ 1.45
RPL28-204ENST00000431533 KDM5DQ9BY66 1539 aa24.1■■□□□ 1.45
RPL28-204ENST00000431533 SOCS7O14512 581 aa24.09■■□□□ 1.45
RPL28-204ENST00000431533 DNMT1P26358 1616 aaKnown RBP24.09■■□□□ 1.45
RPL28-204ENST00000431533 PZPP20742 1482 aa24.08■■□□□ 1.45
RPL28-204ENST00000431533 THEMISQ8N1K5 641 aaPredicted RBP24.07■■□□□ 1.44
RPL28-204ENST00000431533 ILDR2Q71H61 639 aa24.06■■□□□ 1.44
RPL28-204ENST00000431533 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
RPL28-204ENST00000431533 ARHGEF5Q12774 1597 aa24.06■■□□□ 1.44
RPL28-204ENST00000431533 FBXO31Q5XUX0 539 aaPredicted RBP24.05■■□□□ 1.44
RPL28-204ENST00000431533 NLRP1Q9C000 1473 aa24.02■■□□□ 1.44
RPL28-204ENST00000431533 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
RPL28-204ENST00000431533 CPS1P31327 1500 aa24■■□□□ 1.43
RPL28-204ENST00000431533 TOM1O60784 492 aa24■■□□□ 1.43
RPL28-204ENST00000431533 POLR1AO95602 1720 aaPredicted RBP24■■□□□ 1.43
RPL28-204ENST00000431533 UGGT1Q9NYU2 1555 aa23.96■■□□□ 1.43
RPL28-204ENST00000431533 MYOM3Q5VTT5 1437 aa23.96■■□□□ 1.43
RPL28-204ENST00000431533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.96■■□□□ 1.43
RPL28-204ENST00000431533 SHANK2Q9UPX8 1470 aa23.95■■□□□ 1.42
RPL28-204ENST00000431533 SCAF1Q9H7N4 1312 aaKnown RBP23.95■■□□□ 1.42
RPL28-204ENST00000431533 MAST1Q9Y2H9 1570 aa23.94■■□□□ 1.42
RPL28-204ENST00000431533 NEURL4Q96JN8 1562 aa23.93■■□□□ 1.42
RPL28-204ENST00000431533 ZC3H13Q5T200 1668 aaKnown RBP23.92■■□□□ 1.42
RPL28-204ENST00000431533 NPHP4O75161 1426 aaPredicted RBP23.92■■□□□ 1.42
RPL28-204ENST00000431533 RNF17Q9BXT8 1623 aaKnown RBP23.91■■□□□ 1.42
RPL28-204ENST00000431533 MED14O60244 1454 aa23.9■■□□□ 1.42
RPL28-204ENST00000431533 DEPDC5O75140 1603 aa23.9■■□□□ 1.42
RPL28-204ENST00000431533 EIF2AK4Q9P2K8 1649 aaKnown RBP23.9■■□□□ 1.42
RPL28-204ENST00000431533 PIP4K2BP78356 416 aa23.89■■□□□ 1.41
RPL28-204ENST00000431533 ABCC3O15438 1527 aa23.88■■□□□ 1.41
RPL28-204ENST00000431533 PTPN23Q9H3S7 1636 aa23.87■■□□□ 1.41
RPL28-204ENST00000431533 HSPA1LP34931 641 aa23.84■■□□□ 1.41
RPL28-204ENST00000431533 DUOX2Q9NRD8 1548 aa23.84■■□□□ 1.41
RPL28-204ENST00000431533 ERVK-7P63135 1459 aa23.83■■□□□ 1.41
RPL28-204ENST00000431533 VWDEQ8N2E2 1590 aa23.82■■□□□ 1.4
RPL28-204ENST00000431533 IQGAP1P46940 1657 aa23.82■■□□□ 1.4
RPL28-204ENST00000431533 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
RPL28-204ENST00000431533 CROCC2H7BZ55 1655 aa23.78■■□□□ 1.4
RPL28-204ENST00000431533 KANK1Q14678 1352 aa23.77■■□□□ 1.4
RPL28-204ENST00000431533 KIF15Q9NS87 1388 aa23.77■■□□□ 1.4
RPL28-204ENST00000431533 EID1Q9Y6B2 187 aa23.76■■□□□ 1.39
RPL28-204ENST00000431533 ARHGAP31Q2M1Z3 1444 aa23.76■■□□□ 1.39
RPL28-204ENST00000431533 ERBINQ96RT1 1412 aa23.76■■□□□ 1.39
RPL28-204ENST00000431533 MROH1Q8NDA8 1641 aa23.75■■□□□ 1.39
RPL28-204ENST00000431533 CEP152O94986 1710 aa23.75■■□□□ 1.39
RPL28-204ENST00000431533 SCAF11Q99590 1463 aaKnown RBP23.74■■□□□ 1.39
RPL28-204ENST00000431533 CFAP65Q6ZU64 1925 aaKnown RBP23.73■■□□□ 1.39
RPL28-204ENST00000431533 TXNDC2Q86VQ3 553 aa23.73■■□□□ 1.39
RPL28-204ENST00000431533 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
RPL28-204ENST00000431533 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
RPL28-204ENST00000431533 ABCC5O15440 1437 aa23.72■■□□□ 1.39
RPL28-204ENST00000431533 SYNMO15061 1565 aa23.72■■□□□ 1.39
RPL28-204ENST00000431533 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
RPL28-204ENST00000431533 DAPK1P53355 1430 aa23.71■■□□□ 1.39
RPL28-204ENST00000431533 PPARGC1BQ86YN6 1023 aaKnown RBP23.71■■□□□ 1.39
RPL28-204ENST00000431533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.71■■□□□ 1.39
RPL28-204ENST00000431533 MED1Q15648 1581 aaPredicted RBP23.7■■□□□ 1.38
RPL28-204ENST00000431533 PRDM15P57071 1507 aaPredicted RBP23.7■■□□□ 1.38
RPL28-204ENST00000431533 LRRC7Q96NW7 1537 aa23.7■■□□□ 1.38
RPL28-204ENST00000431533 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
RPL28-204ENST00000431533 FAM50AQ14320 339 aaKnown RBP23.69■■□□□ 1.38
RPL28-204ENST00000431533 SLIT1O75093 1534 aa23.68■■□□□ 1.38
RPL28-204ENST00000431533 ARHGAP23Q9P227 1491 aa23.67■■□□□ 1.38
RPL28-204ENST00000431533 ANKRD30AQ9BXX3 1397 aa23.66■■□□□ 1.38
RPL28-204ENST00000431533 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
RPL28-204ENST00000431533 LTKP29376 864 aa23.65■■□□□ 1.38
RPL28-204ENST00000431533 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
RPL28-204ENST00000431533 TMEM2Q9UHN6 1383 aa23.62■■□□□ 1.37
RPL28-204ENST00000431533 ALKQ9UM73 1620 aa23.61■■□□□ 1.37
RPL28-204ENST00000431533 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
RPL28-204ENST00000431533 KDM5AP29375 1690 aaKnown RBP23.58■■□□□ 1.37
RPL28-204ENST00000431533 PIK3C2BO00750 1634 aa23.58■■□□□ 1.36
RPL28-204ENST00000431533 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
RPL28-204ENST00000431533 EFCAB6Q5THR3 1501 aa23.57■■□□□ 1.36
RPL28-204ENST00000431533 IDI1Q13907 227 aa23.56■■□□□ 1.36
RPL28-204ENST00000431533 SLC52A1Q9NWF4 448 aa23.56■■□□□ 1.36
RPL28-204ENST00000431533 KCNA6P17658 529 aa23.53■■□□□ 1.36
RPL28-204ENST00000431533 HDGFP51858 240 aaKnown RBP23.52■■□□□ 1.36
RPL28-204ENST00000431533 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
RPL28-204ENST00000431533 BCANQ96GW7 911 aa23.51■■□□□ 1.35
RPL28-204ENST00000431533 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
RPL28-204ENST00000431533 ITGAEP38570 1179 aa23.49■■□□□ 1.35
RPL28-204ENST00000431533 PROSER2Q86WR7 435 aaPredicted RBP23.49■■□□□ 1.35
RPL28-204ENST00000431533 NOS1P29475 1434 aa23.49■■□□□ 1.35
RPL28-204ENST00000431533 TMEM94Q12767 1356 aa23.48■■□□□ 1.35
RPL28-204ENST00000431533 RPRD2Q5VT52 1461 aaKnown RBP23.47■■□□□ 1.35
RPL28-204ENST00000431533 SLC26A8Q96RN1 970 aa23.46■■□□□ 1.35
RPL28-204ENST00000431533 ADGRB3O60242 1522 aa23.45■■□□□ 1.34
RPL28-204ENST00000431533 ANKRD50Q9ULJ7 1429 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms