RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 RIMS1Q86UR5 1692 aaKnown RBP30.47■■■□□ 2.47
CSNK1E-207ENST00000430335 ESF1Q9H501 851 aaKnown RBP30.46■■■□□ 2.47
CSNK1E-207ENST00000430335 RNF17Q9BXT8 1623 aaKnown RBP30.44■■■□□ 2.46
CSNK1E-207ENST00000430335 ANKRD50Q9ULJ7 1429 aa30.44■■■□□ 2.46
CSNK1E-207ENST00000430335 FAM135AQ9P2D6 1515 aa30.42■■■□□ 2.46
CSNK1E-207ENST00000430335 KDM5DQ9BY66 1539 aa30.36■■■□□ 2.45
CSNK1E-207ENST00000430335 MROH1Q8NDA8 1641 aa30.36■■■□□ 2.45
CSNK1E-207ENST00000430335 MROH2AA6NES4 1674 aa30.34■■■□□ 2.45
CSNK1E-207ENST00000430335 ZMYM3Q14202 1370 aa30.34■■■□□ 2.45
CSNK1E-207ENST00000430335 WASHC2CQ9Y4E1 1318 aa30.34■■■□□ 2.45
CSNK1E-207ENST00000430335 DEPDC5O75140 1603 aa30.33■■■□□ 2.45
CSNK1E-207ENST00000430335 PRDM15P57071 1507 aaPredicted RBP30.33■■■□□ 2.45
CSNK1E-207ENST00000430335 CLTCQ00610 1675 aaKnown RBP30.32■■■□□ 2.44
CSNK1E-207ENST00000430335 CEBPAP49715 358 aaPredicted RBP30.31■■■□□ 2.44
CSNK1E-207ENST00000430335 NAIPQ13075 1403 aa30.3■■■□□ 2.44
CSNK1E-207ENST00000430335 HFM1A2PYH4 1435 aa30.3■■■□□ 2.44
CSNK1E-207ENST00000430335 ABCC3O15438 1527 aa30.28■■■□□ 2.44
CSNK1E-207ENST00000430335 KANK1Q14678 1352 aa30.28■■■□□ 2.44
CSNK1E-207ENST00000430335 C3P01024 1663 aa30.27■■■□□ 2.44
CSNK1E-207ENST00000430335 ZC3H13Q5T200 1668 aaKnown RBP30.27■■■□□ 2.44
CSNK1E-207ENST00000430335 PLPPR3Q6T4P5 718 aa30.26■■■□□ 2.43
CSNK1E-207ENST00000430335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.26■■■□□ 2.433e-9■■■□□ 17
CSNK1E-207ENST00000430335 VWDEQ8N2E2 1590 aa30.24■■■□□ 2.43
CSNK1E-207ENST00000430335 GCC2Q8IWJ2 1684 aa30.23■■■□□ 2.43
CSNK1E-207ENST00000430335 LMTK2Q8IWU2 1503 aa30.22■■■□□ 2.43
CSNK1E-207ENST00000430335 NPATQ14207 1427 aa30.22■■■□□ 2.43
CSNK1E-207ENST00000430335 UNC13BO14795 1591 aa30.21■■■□□ 2.43
CSNK1E-207ENST00000430335 PZPP20742 1482 aa30.19■■■□□ 2.42
CSNK1E-207ENST00000430335 ARHGAP31Q2M1Z3 1444 aa30.17■■■□□ 2.42
CSNK1E-207ENST00000430335 CEP152O94986 1710 aa30.16■■■□□ 2.42
CSNK1E-207ENST00000430335 CAMSAP1Q5T5Y3 1602 aa30.14■■■□□ 2.41
CSNK1E-207ENST00000430335 SETD1BQ9UPS6 1966 aaKnown RBP30.14■■■□□ 2.41
CSNK1E-207ENST00000430335 NUP155O75694 1391 aa30.13■■■□□ 2.41
CSNK1E-207ENST00000430335 FBXO31Q5XUX0 539 aaPredicted RBP30.1■■■□□ 2.41
CSNK1E-207ENST00000430335 IQGAP3Q86VI3 1631 aa30.08■■■□□ 2.41
CSNK1E-207ENST00000430335 EFCAB6Q5THR3 1501 aa30.07■■■□□ 2.4
CSNK1E-207ENST00000430335 LMTK3Q96Q04 1460 aa30.07■■■□□ 2.4
CSNK1E-207ENST00000430335 UHRF1BP1Q6BDS2 1440 aa30.07■■■□□ 2.4
CSNK1E-207ENST00000430335 SETD5Q9C0A6 1442 aa30.07■■■□□ 2.4
CSNK1E-207ENST00000430335 PREX1Q8TCU6 1659 aa30.06■■■□□ 2.4
CSNK1E-207ENST00000430335 TNRQ92752 1358 aa30.05■■■□□ 2.4
CSNK1E-207ENST00000430335 SPATA31D1Q6ZQQ2 1576 aa30.05■■■□□ 2.4
CSNK1E-207ENST00000430335 ERVK-7P63135 1459 aa30.05■■■□□ 2.4
CSNK1E-207ENST00000430335 TET3O43151 1660 aa30.04■■■□□ 2.4
CSNK1E-207ENST00000430335 ACIN1Q9UKV3 1341 aaKnown RBP30.03■■■□□ 2.4
CSNK1E-207ENST00000430335 RPRD2Q5VT52 1461 aaKnown RBP30.03■■■□□ 2.4
CSNK1E-207ENST00000430335 TRIM52Q96A61 297 aa29.99■■■□□ 2.39
CSNK1E-207ENST00000430335 MYO3AQ8NEV4 1616 aa29.97■■■□□ 2.39
CSNK1E-207ENST00000430335 NLRP1Q9C000 1473 aa29.96■■■□□ 2.39
CSNK1E-207ENST00000430335 RAB3GAP2Q9H2M9 1393 aa29.96■■■□□ 2.39
CSNK1E-207ENST00000430335 NOS1P29475 1434 aa29.96■■■□□ 2.39
CSNK1E-207ENST00000430335 HRCP23327 699 aa29.93■■■□□ 2.38
CSNK1E-207ENST00000430335 TRIM26Q12899 539 aaPredicted RBP29.93■■■□□ 2.38
CSNK1E-207ENST00000430335 A2ML1A8K2U0 1454 aa29.93■■■□□ 2.38
CSNK1E-207ENST00000430335 ZNF142P52746 1687 aaPredicted RBP29.91■■■□□ 2.38
CSNK1E-207ENST00000430335 CEP170BQ9Y4F5 1589 aaPredicted RBP29.91■■■□□ 2.38
CSNK1E-207ENST00000430335 E9PCH4 1651 aa29.91■■■□□ 2.38
CSNK1E-207ENST00000430335 CFAP65Q6ZU64 1925 aaKnown RBP29.9■■■□□ 2.38
CSNK1E-207ENST00000430335 HSPA2P54652 639 aa29.9■■■□□ 2.38
CSNK1E-207ENST00000430335 SLC4A1APQ9BWU0 796 aaKnown RBP29.88■■■□□ 2.37
CSNK1E-207ENST00000430335 SYNMO15061 1565 aa29.86■■■□□ 2.37
CSNK1E-207ENST00000430335 SLC52A1Q9NWF4 448 aa29.85■■■□□ 2.37
CSNK1E-207ENST00000430335 PKD2Q13563 968 aa29.84■■■□□ 2.37
CSNK1E-207ENST00000430335 PTPRTO14522 1441 aa29.82■■■□□ 2.36
CSNK1E-207ENST00000430335 IDI1Q13907 227 aa29.82■■■□□ 2.36
CSNK1E-207ENST00000430335 MPHOSPH9Q99550 1183 aa29.82■■■□□ 2.36
CSNK1E-207ENST00000430335 UGGT1Q9NYU2 1555 aa29.81■■■□□ 2.36
CSNK1E-207ENST00000430335 THEMISQ8N1K5 641 aaPredicted RBP29.8■■■□□ 2.36
CSNK1E-207ENST00000430335 PLA2R1Q13018 1463 aa29.78■■■□□ 2.36
CSNK1E-207ENST00000430335 PIK3C2BO00750 1634 aa29.74■■■□□ 2.35
CSNK1E-207ENST00000430335 SPHKAPQ2M3C7 1700 aa29.73■■■□□ 2.35
CSNK1E-207ENST00000430335 UBR1Q8IWV7 1749 aa29.72■■■□□ 2.35
CSNK1E-207ENST00000430335 KDM5AP29375 1690 aaKnown RBP29.72■■■□□ 2.35
CSNK1E-207ENST00000430335 TRPM2O94759 1503 aa29.71■■■□□ 2.35
CSNK1E-207ENST00000430335 STAG3Q9UJ98 1225 aa29.7■■■□□ 2.35
CSNK1E-207ENST00000430335 ADGRB3O60242 1522 aa29.69■■■□□ 2.34
CSNK1E-207ENST00000430335 FOXD1Q16676 465 aa29.68■■■□□ 2.34
CSNK1E-207ENST00000430335 STRCQ7RTU9 1775 aa29.67■■■□□ 2.34
CSNK1E-207ENST00000430335 DMRT2Q9Y5R5 561 aa29.65■■■□□ 2.34
CSNK1E-207ENST00000430335 ARHGAP23Q9P227 1491 aa29.65■■■□□ 2.34
CSNK1E-207ENST00000430335 SLIT1O75093 1534 aa29.65■■■□□ 2.34
CSNK1E-207ENST00000430335 ANKLE2Q86XL3 938 aa29.64■■■□□ 2.34
CSNK1E-207ENST00000430335 NCKAP5LQ9HCH0 1330 aa29.64■■■□□ 2.34
CSNK1E-207ENST00000430335 TMEM2Q9UHN6 1383 aa29.64■■■□□ 2.33
CSNK1E-207ENST00000430335 TMEM131LA2VDJ0 1609 aa29.62■■■□□ 2.33
CSNK1E-207ENST00000430335 CLTCL1P53675 1640 aa29.6■■■□□ 2.33
CSNK1E-207ENST00000430335 CHGAP10645 457 aaKnown RBP29.59■■■□□ 2.33
CSNK1E-207ENST00000430335 CCDC144AA2RUR9 1427 aa29.56■■■□□ 2.32
CSNK1E-207ENST00000430335 EID1Q9Y6B2 187 aa29.56■■■□□ 2.32
CSNK1E-207ENST00000430335 MED14O60244 1454 aa29.55■■■□□ 2.32
CSNK1E-207ENST00000430335 SCAF11Q99590 1463 aaKnown RBP29.55■■■□□ 2.32
CSNK1E-207ENST00000430335 TXNDC2Q86VQ3 553 aa29.55■■■□□ 2.32
CSNK1E-207ENST00000430335 LTKP29376 864 aa29.54■■■□□ 2.32
CSNK1E-207ENST00000430335 NEURL4Q96JN8 1562 aa29.54■■■□□ 2.32
CSNK1E-207ENST00000430335 POLR1AO95602 1720 aaPredicted RBP29.54■■■□□ 2.32
CSNK1E-207ENST00000430335 ANKRD30BQ9BXX2 1392 aa29.53■■■□□ 2.32
CSNK1E-207ENST00000430335 ZFYVE9O95405 1425 aa29.53■■■□□ 2.32
CSNK1E-207ENST00000430335 HDGFP51858 240 aaKnown RBP29.52■■■□□ 2.32
CSNK1E-207ENST00000430335 RIMS2Q9UQ26 1411 aa29.51■■■□□ 2.31
CSNK1E-207ENST00000430335 MYO5BQ9ULV0 1848 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms