RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 HFM1A2PYH4 1435 aa22.51■■□□□ 1.19
GARNL3-204ENST00000429629 NAIPQ13075 1403 aa22.49■■□□□ 1.19
GARNL3-204ENST00000429629 WASHC2CQ9Y4E1 1318 aa22.49■■□□□ 1.19
GARNL3-204ENST00000429629 PTPRMP28827 1452 aa22.46■■□□□ 1.19
GARNL3-204ENST00000429629 ZMYM3Q14202 1370 aa22.45■■□□□ 1.18
GARNL3-204ENST00000429629 KANK1Q14678 1352 aa22.45■■□□□ 1.18
GARNL3-204ENST00000429629 KDM5DQ9BY66 1539 aa22.45■■□□□ 1.18
GARNL3-204ENST00000429629 RNF17Q9BXT8 1623 aaKnown RBP22.45■■□□□ 1.18
GARNL3-204ENST00000429629 HRCP23327 699 aa22.43■■□□□ 1.18
GARNL3-204ENST00000429629 MADDQ8WXG6 1647 aa22.42■■□□□ 1.18
GARNL3-204ENST00000429629 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
GARNL3-204ENST00000429629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.4■■□□□ 1.18
GARNL3-204ENST00000429629 PRDM15P57071 1507 aaPredicted RBP22.4■■□□□ 1.18
GARNL3-204ENST00000429629 AEBP2Q6ZN18 517 aaPredicted RBP22.39■■□□□ 1.17
GARNL3-204ENST00000429629 ARHGAP31Q2M1Z3 1444 aa22.38■■□□□ 1.17
GARNL3-204ENST00000429629 SETD5Q9C0A6 1442 aa22.38■■□□□ 1.17
GARNL3-204ENST00000429629 DEPDC5O75140 1603 aa22.38■■□□□ 1.17
GARNL3-204ENST00000429629 MROH1Q8NDA8 1641 aa22.38■■□□□ 1.17
GARNL3-204ENST00000429629 LMTK2Q8IWU2 1503 aa22.37■■□□□ 1.17
GARNL3-204ENST00000429629 VWDEQ8N2E2 1590 aa22.37■■□□□ 1.17
GARNL3-204ENST00000429629 NPATQ14207 1427 aa22.36■■□□□ 1.17
GARNL3-204ENST00000429629 ABCC3O15438 1527 aa22.36■■□□□ 1.17
GARNL3-204ENST00000429629 CEBPAP49715 358 aaPredicted RBP22.35■■□□□ 1.17
GARNL3-204ENST00000429629 NUP155O75694 1391 aa22.35■■□□□ 1.17
GARNL3-204ENST00000429629 MROH2AA6NES4 1674 aa22.33■■□□□ 1.17
GARNL3-204ENST00000429629 FER1L4A9Z1Z3 1794 aa22.33■■□□□ 1.17
GARNL3-204ENST00000429629 PZPP20742 1482 aa22.31■■□□□ 1.16
GARNL3-204ENST00000429629 ZC3H13Q5T200 1668 aaKnown RBP22.3■■□□□ 1.16
GARNL3-204ENST00000429629 RIMS1Q86UR5 1692 aaKnown RBP22.3■■□□□ 1.16
GARNL3-204ENST00000429629 UNC13BO14795 1591 aa22.3■■□□□ 1.16
GARNL3-204ENST00000429629 GCC2Q8IWJ2 1684 aa22.3■■□□□ 1.16
GARNL3-204ENST00000429629 RPRD2Q5VT52 1461 aaKnown RBP22.27■■□□□ 1.16
GARNL3-204ENST00000429629 TRIM52Q96A61 297 aa22.26■■□□□ 1.15
GARNL3-204ENST00000429629 CLTCQ00610 1675 aaKnown RBP22.26■■□□□ 1.15
GARNL3-204ENST00000429629 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
GARNL3-204ENST00000429629 FBXO31Q5XUX0 539 aaPredicted RBP22.25■■□□□ 1.15
GARNL3-204ENST00000429629 IQGAP3Q86VI3 1631 aa22.22■■□□□ 1.15
GARNL3-204ENST00000429629 C3P01024 1663 aa22.22■■□□□ 1.15
GARNL3-204ENST00000429629 TNRQ92752 1358 aa22.22■■□□□ 1.15
GARNL3-204ENST00000429629 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
GARNL3-204ENST00000429629 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
GARNL3-204ENST00000429629 SLC52A1Q9NWF4 448 aa22.2■■□□□ 1.14
GARNL3-204ENST00000429629 NOS1P29475 1434 aa22.2■■□□□ 1.14
GARNL3-204ENST00000429629 EFCAB6Q5THR3 1501 aa22.2■■□□□ 1.14
GARNL3-204ENST00000429629 ERVK-7P63135 1459 aa22.19■■□□□ 1.14
GARNL3-204ENST00000429629 SETD1BQ9UPS6 1966 aaKnown RBP22.18■■□□□ 1.14
GARNL3-204ENST00000429629 SPATA31D1Q6ZQQ2 1576 aa22.18■■□□□ 1.14
GARNL3-204ENST00000429629 MPHOSPH9Q99550 1183 aa22.18■■□□□ 1.14
GARNL3-204ENST00000429629 CAMSAP1Q5T5Y3 1602 aa22.17■■□□□ 1.14
GARNL3-204ENST00000429629 UHRF1BP1Q6BDS2 1440 aa22.17■■□□□ 1.14
GARNL3-204ENST00000429629 TET3O43151 1660 aa22.17■■□□□ 1.14
GARNL3-204ENST00000429629 NLRP1Q9C000 1473 aa22.16■■□□□ 1.14
GARNL3-204ENST00000429629 PKD2Q13563 968 aa22.15■■□□□ 1.14
GARNL3-204ENST00000429629 PTPRTO14522 1441 aa22.14■■□□□ 1.13
GARNL3-204ENST00000429629 CEP152O94986 1710 aa22.13■■□□□ 1.13
GARNL3-204ENST00000429629 LMTK3Q96Q04 1460 aa22.11■■□□□ 1.13
GARNL3-204ENST00000429629 A2ML1A8K2U0 1454 aa22.1■■□□□ 1.13
GARNL3-204ENST00000429629 IDI1Q13907 227 aa22.1■■□□□ 1.13
GARNL3-204ENST00000429629 THEMISQ8N1K5 641 aaPredicted RBP22.1■■□□□ 1.13
GARNL3-204ENST00000429629 PREX1Q8TCU6 1659 aa22.05■■□□□ 1.12
GARNL3-204ENST00000429629 E9PCH4 1651 aa22.04■■□□□ 1.12
GARNL3-204ENST00000429629 PLA2R1Q13018 1463 aa22.03■■□□□ 1.12
GARNL3-204ENST00000429629 SYNMO15061 1565 aa22.01■■□□□ 1.11
GARNL3-204ENST00000429629 CEP170BQ9Y4F5 1589 aaPredicted RBP22.01■■□□□ 1.11
GARNL3-204ENST00000429629 PCGF6Q9BYE7 350 aa22.01■■□□□ 1.11
GARNL3-204ENST00000429629 MYO3AQ8NEV4 1616 aa22■■□□□ 1.11
GARNL3-204ENST00000429629 HSPA2P54652 639 aa21.99■■□□□ 1.11
GARNL3-204ENST00000429629 STAG3Q9UJ98 1225 aa21.99■■□□□ 1.11
GARNL3-204ENST00000429629 UGGT1Q9NYU2 1555 aa21.99■■□□□ 1.11
GARNL3-204ENST00000429629 TRPM2O94759 1503 aa21.98■■□□□ 1.11
GARNL3-204ENST00000429629 HDGFP51858 240 aaKnown RBP21.97■■□□□ 1.11
GARNL3-204ENST00000429629 FOXD1Q16676 465 aa21.97■■□□□ 1.11
GARNL3-204ENST00000429629 ZNF142P52746 1687 aaPredicted RBP21.97■■□□□ 1.11
GARNL3-204ENST00000429629 ANKLE2Q86XL3 938 aa21.96■■□□□ 1.11
GARNL3-204ENST00000429629 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
GARNL3-204ENST00000429629 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
GARNL3-204ENST00000429629 PIK3C2BO00750 1634 aa21.95■■□□□ 1.1
GARNL3-204ENST00000429629 TMEM2Q9UHN6 1383 aa21.94■■□□□ 1.1
GARNL3-204ENST00000429629 KDM5AP29375 1690 aaKnown RBP21.94■■□□□ 1.1
GARNL3-204ENST00000429629 ARHGAP23Q9P227 1491 aa21.92■■□□□ 1.1
GARNL3-204ENST00000429629 CCDC144AA2RUR9 1427 aa21.92■■□□□ 1.1
GARNL3-204ENST00000429629 EID1Q9Y6B2 187 aa21.91■■□□□ 1.1
GARNL3-204ENST00000429629 SLIT1O75093 1534 aa21.9■■□□□ 1.1
GARNL3-204ENST00000429629 RPGRIP1LQ68CZ1 1315 aa21.9■■□□□ 1.1
GARNL3-204ENST00000429629 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.9■■□□□ 1.1
GARNL3-204ENST00000429629 ADGRB3O60242 1522 aa21.9■■□□□ 1.1
GARNL3-204ENST00000429629 SPHKAPQ2M3C7 1700 aa21.89■■□□□ 1.09
GARNL3-204ENST00000429629 CHGAP10645 457 aaKnown RBP21.88■■□□□ 1.09
GARNL3-204ENST00000429629 TXNDC2Q86VQ3 553 aa21.88■■□□□ 1.09
GARNL3-204ENST00000429629 CFAP65Q6ZU64 1925 aaKnown RBP21.88■■□□□ 1.09
GARNL3-204ENST00000429629 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
GARNL3-204ENST00000429629 LTKP29376 864 aa21.86■■□□□ 1.09
GARNL3-204ENST00000429629 UBR1Q8IWV7 1749 aa21.86■■□□□ 1.09
GARNL3-204ENST00000429629 NCKAP5LQ9HCH0 1330 aa21.85■■□□□ 1.09
GARNL3-204ENST00000429629 MED14O60244 1454 aa21.85■■□□□ 1.09
GARNL3-204ENST00000429629 TMEM131LA2VDJ0 1609 aa21.85■■□□□ 1.09
GARNL3-204ENST00000429629 NEURL4Q96JN8 1562 aa21.84■■□□□ 1.09
GARNL3-204ENST00000429629 STAC3Q96MF2 364 aa21.84■■□□□ 1.09
GARNL3-204ENST00000429629 ZFYVE9O95405 1425 aa21.83■■□□□ 1.09
GARNL3-204ENST00000429629 SPATA31E1Q6ZUB1 1445 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms