RNA–Protein interactions for RNA: ENST00000428308.6

PAPD4-203, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-203ENST00000428308 AFAP1Q8N556 730 aa9.62□□□□□ -0.87
PAPD4-203ENST00000428308 KCTD17Q8N5Z5 321 aa9.62□□□□□ -0.87
PAPD4-203ENST00000428308 ZC3H15Q8WU90 426 aaKnown RBP9.62□□□□□ -0.87
PAPD4-203ENST00000428308 GTPBP6O43824 516 aaPredicted RBP9.61□□□□□ -0.87
PAPD4-203ENST00000428308 CDC42BPAQ5VT25 1732 aa9.61□□□□□ -0.87
PAPD4-203ENST00000428308 LMTK3Q96Q04 1460 aa9.6□□□□□ -0.87
PAPD4-203ENST00000428308 HMGB1P09429 215 aaKnown RBP9.6□□□□□ -0.87
PAPD4-203ENST00000428308 ADAMTSL3P82987 1691 aa9.6□□□□□ -0.87
PAPD4-203ENST00000428308 HSP90B1P14625 803 aaKnown RBP9.6□□□□□ -0.87
PAPD4-203ENST00000428308 SCAPERQ9BY12 1400 aa9.6□□□□□ -0.87
PAPD4-203ENST00000428308 MYO5CQ9NQX4 1742 aa9.6□□□□□ -0.87
PAPD4-203ENST00000428308 CCDC18Q5T9S5 1454 aa9.59□□□□□ -0.87
PAPD4-203ENST00000428308 TIAM1Q13009 1591 aa9.59□□□□□ -0.87
PAPD4-203ENST00000428308 APBB1O00213 710 aa9.59□□□□□ -0.87
PAPD4-203ENST00000428308 ARHGAP5Q13017 1502 aa9.59□□□□□ -0.87
PAPD4-203ENST00000428308 MADDQ8WXG6 1647 aa9.59□□□□□ -0.87
PAPD4-203ENST00000428308 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
PAPD4-203ENST00000428308 MYT1LQ9UL68 1186 aa9.58□□□□□ -0.88
PAPD4-203ENST00000428308 ARHGEF12Q9NZN5 1544 aa9.57□□□□□ -0.88
PAPD4-203ENST00000428308 RAD21O60216 631 aa9.57□□□□□ -0.88
PAPD4-203ENST00000428308 HNRNPMP52272 730 aaKnown RBP eCLIP9.57□□□□□ -0.889e-7■■■■□ 24.4
PAPD4-203ENST00000428308 SIGLEC1Q9BZZ2 1709 aa9.56□□□□□ -0.88
PAPD4-203ENST00000428308 EFCAB2Q5VUJ9 269 aa9.56□□□□□ -0.88
PAPD4-203ENST00000428308 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
PAPD4-203ENST00000428308 CHMP4AQ9BY43 222 aa9.56□□□□□ -0.88
PAPD4-203ENST00000428308 PLCH2O75038 1416 aa9.56□□□□□ -0.88
PAPD4-203ENST00000428308 BCORL1Q5H9F3 1711 aa9.56□□□□□ -0.88
PAPD4-203ENST00000428308 NCOA2Q15596 1464 aa9.56□□□□□ -0.88
PAPD4-203ENST00000428308 LRRC9Q6ZRR7 1453 aa9.56□□□□□ -0.88
PAPD4-203ENST00000428308 GPATCH8Q9UKJ3 1502 aaKnown RBP9.55□□□□□ -0.88
PAPD4-203ENST00000428308 PREX2Q70Z35 1606 aa9.55□□□□□ -0.88
PAPD4-203ENST00000428308 TRAPPC8Q9Y2L5 1435 aa9.54□□□□□ -0.88
PAPD4-203ENST00000428308 SAMD1Q6SPF0 538 aaPredicted RBP9.54□□□□□ -0.88
PAPD4-203ENST00000428308 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
PAPD4-203ENST00000428308 CFDP1Q9UEE9 299 aaPredicted RBP9.54□□□□□ -0.88
PAPD4-203ENST00000428308 SYCP2Q9BX26 1530 aa9.54□□□□□ -0.88
PAPD4-203ENST00000428308 RICTORQ6R327 1708 aa9.54□□□□□ -0.88
PAPD4-203ENST00000428308 CCNB3Q8WWL7 1395 aa9.54□□□□□ -0.88
PAPD4-203ENST00000428308 SAMD9LQ8IVG5 1584 aa9.54□□□□□ -0.88
PAPD4-203ENST00000428308 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
PAPD4-203ENST00000428308 EHBP1L1Q8N3D4 1523 aa9.53□□□□□ -0.88
PAPD4-203ENST00000428308 RIMS1Q86UR5 1692 aaKnown RBP9.53□□□□□ -0.88
PAPD4-203ENST00000428308 ARHGEF40Q8TER5 1519 aa9.52□□□□□ -0.88
PAPD4-203ENST00000428308 POGZQ7Z3K3 1410 aa9.52□□□□□ -0.89
PAPD4-203ENST00000428308 ZFYVE16Q7Z3T8 1539 aa9.52□□□□□ -0.89
PAPD4-203ENST00000428308 SUPT6HQ7KZ85 1726 aaKnown RBP9.52□□□□□ -0.89
PAPD4-203ENST00000428308 CIZ1Q9ULV3 898 aaPredicted RBP9.51□□□□□ -0.89
PAPD4-203ENST00000428308 ATP10AO60312 1499 aa9.5□□□□□ -0.89
PAPD4-203ENST00000428308 POTEHQ6S545 545 aa9.5□□□□□ -0.89
PAPD4-203ENST00000428308 PUS7Q96PZ0 661 aaKnown RBP9.5□□□□□ -0.89
PAPD4-203ENST00000428308 MTMR7Q9Y216 660 aa9.5□□□□□ -0.89
PAPD4-203ENST00000428308 ABCC1P33527 1531 aa9.49□□□□□ -0.89
PAPD4-203ENST00000428308 ZNF428Q96B54 188 aa9.49□□□□□ -0.89
PAPD4-203ENST00000428308 MAGI2Q86UL8 1455 aa9.49□□□□□ -0.89
PAPD4-203ENST00000428308 ITGAEP38570 1179 aa9.48□□□□□ -0.89
PAPD4-203ENST00000428308 ZMYM4Q5VZL5 1548 aa9.48□□□□□ -0.89
PAPD4-203ENST00000428308 ITSN2Q9NZM3 1697 aa9.48□□□□□ -0.89
PAPD4-203ENST00000428308 RNF25Q96BH1 459 aaPredicted RBP9.47□□□□□ -0.89
PAPD4-203ENST00000428308 CHIC2Q9UKJ5 165 aa9.47□□□□□ -0.89
PAPD4-203ENST00000428308 CAMSAP2Q08AD1 1489 aa9.47□□□□□ -0.89
PAPD4-203ENST00000428308 C9orf84Q5VXU9 1444 aa9.46□□□□□ -0.89
PAPD4-203ENST00000428308 MKRN3Q13064 507 aaKnown RBP9.46□□□□□ -0.89
PAPD4-203ENST00000428308 FAM50AQ14320 339 aaKnown RBP9.46□□□□□ -0.89
PAPD4-203ENST00000428308 ILDR2Q71H61 639 aa9.46□□□□□ -0.89
PAPD4-203ENST00000428308 CCDC82Q8N4S0 544 aa9.46□□□□□ -0.89
PAPD4-203ENST00000428308 ABCA6Q8N139 1617 aa9.46□□□□□ -0.9
PAPD4-203ENST00000428308 IL27Q8NEV9 243 aa9.46□□□□□ -0.9
PAPD4-203ENST00000428308 GPBP1L1Q9HC44 474 aaPredicted RBP9.46□□□□□ -0.9
PAPD4-203ENST00000428308 CFAP74Q9C0B2 1584 aa9.45□□□□□ -0.9
PAPD4-203ENST00000428308 KIDINS220Q9ULH0 1771 aa9.45□□□□□ -0.9
PAPD4-203ENST00000428308 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
PAPD4-203ENST00000428308 ZNF518AQ6AHZ1 1483 aa9.44□□□□□ -0.9
PAPD4-203ENST00000428308 MYOM3Q5VTT5 1437 aa9.44□□□□□ -0.9
PAPD4-203ENST00000428308 ESF1Q9H501 851 aaKnown RBP9.44□□□□□ -0.9
PAPD4-203ENST00000428308 MBD5Q9P267 1494 aa9.44□□□□□ -0.9
PAPD4-203ENST00000428308 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
PAPD4-203ENST00000428308 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
PAPD4-203ENST00000428308 KDM5CP41229 1560 aa9.43□□□□□ -0.9
PAPD4-203ENST00000428308 SPAG9O60271 1321 aaKnown RBP9.42□□□□□ -0.9
PAPD4-203ENST00000428308 DIP2CQ9Y2E4 1556 aa9.42□□□□□ -0.9
PAPD4-203ENST00000428308 GGT6Q6P531 493 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 PTPN23Q9H3S7 1636 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 MAP3K1Q13233 1512 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 AEBP1Q8IUX7 1158 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 TRAIPQ9BWF2 469 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 DMRT2Q9Y5R5 561 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 UHRF1BP1Q6BDS2 1440 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 FGD6Q6ZV73 1430 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 NCKAP5LQ9HCH0 1330 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 DISP3Q9P2K9 1392 aa9.41□□□□□ -0.9
PAPD4-203ENST00000428308 FER1L4A9Z1Z3 1794 aa9.4□□□□□ -0.9
PAPD4-203ENST00000428308 ZMYND10O75800 440 aa9.4□□□□□ -0.91
PAPD4-203ENST00000428308 RRP7BPQ9NSQ0 103 aa9.4□□□□□ -0.91
PAPD4-203ENST00000428308 ATP7AQ04656 1500 aa9.4□□□□□ -0.91
PAPD4-203ENST00000428308 TMCO4Q5TGY1 634 aa9.39□□□□□ -0.91
PAPD4-203ENST00000428308 MLH3Q9UHC1 1453 aa9.39□□□□□ -0.91
PAPD4-203ENST00000428308 PTPRKQ15262 1439 aa9.39□□□□□ -0.91
PAPD4-203ENST00000428308 CFAP65Q6ZU64 1925 aaKnown RBP9.39□□□□□ -0.91
PAPD4-203ENST00000428308 ZMYM3Q14202 1370 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms