RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
RTN4-210ENST00000427710 DUOX2Q9NRD8 1548 aa22.94■■□□□ 1.26
RTN4-210ENST00000427710 RNF17Q9BXT8 1623 aaKnown RBP22.93■■□□□ 1.26
RTN4-210ENST00000427710 EIF2AK4Q9P2K8 1649 aaKnown RBP22.93■■□□□ 1.26
RTN4-210ENST00000427710 PPP6R1Q9UPN7 881 aa22.91■■□□□ 1.26
RTN4-210ENST00000427710 CEP152O94986 1710 aa22.91■■□□□ 1.26
RTN4-210ENST00000427710 UHRF1BP1Q6BDS2 1440 aa22.91■■□□□ 1.26
RTN4-210ENST00000427710 KDM5DQ9BY66 1539 aa22.9■■□□□ 1.26
RTN4-210ENST00000427710 MROH1Q8NDA8 1641 aa22.9■■□□□ 1.26
RTN4-210ENST00000427710 WASHC2CQ9Y4E1 1318 aa22.89■■□□□ 1.26
RTN4-210ENST00000427710 PTPRKQ15262 1439 aa22.89■■□□□ 1.25
RTN4-210ENST00000427710 ANKRD30AQ9BXX3 1397 aa22.88■■□□□ 1.25
RTN4-210ENST00000427710 NCOA1Q15788 1441 aa22.86■■□□□ 1.25
RTN4-210ENST00000427710 NPATQ14207 1427 aa22.85■■□□□ 1.25
RTN4-210ENST00000427710 ITGAEP38570 1179 aa22.85■■□□□ 1.25
RTN4-210ENST00000427710 FBXO31Q5XUX0 539 aaPredicted RBP22.85■■□□□ 1.25
RTN4-210ENST00000427710 ERBINQ96RT1 1412 aa22.84■■□□□ 1.25
RTN4-210ENST00000427710 ABCC3O15438 1527 aa22.84■■□□□ 1.25
RTN4-210ENST00000427710 MYO3AQ8NEV4 1616 aa22.84■■□□□ 1.25
RTN4-210ENST00000427710 ADGRL2O95490 1459 aa22.84■■□□□ 1.25
RTN4-210ENST00000427710 STRCQ7RTU9 1775 aa22.84■■□□□ 1.25
RTN4-210ENST00000427710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.83■■□□□ 1.25
RTN4-210ENST00000427710 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
RTN4-210ENST00000427710 ZC3H13Q5T200 1668 aaKnown RBP22.81■■□□□ 1.24
RTN4-210ENST00000427710 PZPP20742 1482 aa22.8■■□□□ 1.24
RTN4-210ENST00000427710 DEPDC5O75140 1603 aa22.79■■□□□ 1.24
RTN4-210ENST00000427710 CAMSAP1Q5T5Y3 1602 aa22.79■■□□□ 1.24
RTN4-210ENST00000427710 ZNF142P52746 1687 aaPredicted RBP22.78■■□□□ 1.24
RTN4-210ENST00000427710 PRDM15P57071 1507 aaPredicted RBP22.77■■□□□ 1.24
RTN4-210ENST00000427710 CEP170BQ9Y4F5 1589 aaPredicted RBP22.76■■□□□ 1.23
RTN4-210ENST00000427710 TNRQ92752 1358 aa22.76■■□□□ 1.23
RTN4-210ENST00000427710 RRBP1Q9P2E9 1410 aaKnown RBP22.73■■□□□ 1.23
RTN4-210ENST00000427710 ANKRD50Q9ULJ7 1429 aa22.73■■□□□ 1.23
RTN4-210ENST00000427710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.72■■□□□ 1.23
RTN4-210ENST00000427710 KANK1Q14678 1352 aa22.7■■□□□ 1.22
RTN4-210ENST00000427710 A2ML1A8K2U0 1454 aa22.7■■□□□ 1.22
RTN4-210ENST00000427710 ERVK-7P63135 1459 aa22.69■■□□□ 1.22
RTN4-210ENST00000427710 SPATA31D1Q6ZQQ2 1576 aa22.68■■□□□ 1.22
RTN4-210ENST00000427710 VWDEQ8N2E2 1590 aa22.68■■□□□ 1.22
RTN4-210ENST00000427710 ROCK1Q13464 1354 aa22.68■■□□□ 1.22
RTN4-210ENST00000427710 NCKAP5LQ9HCH0 1330 aa22.68■■□□□ 1.22
RTN4-210ENST00000427710 LMTK2Q8IWU2 1503 aa22.63■■□□□ 1.21
RTN4-210ENST00000427710 UNC13BO14795 1591 aa22.63■■□□□ 1.21
RTN4-210ENST00000427710 ARHGAP31Q2M1Z3 1444 aa22.62■■□□□ 1.21
RTN4-210ENST00000427710 NLRP1Q9C000 1473 aa22.61■■□□□ 1.21
RTN4-210ENST00000427710 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
RTN4-210ENST00000427710 POLR1AO95602 1720 aaPredicted RBP22.6■■□□□ 1.21
RTN4-210ENST00000427710 UGGT1Q9NYU2 1555 aa22.59■■□□□ 1.21
RTN4-210ENST00000427710 EFCAB6Q5THR3 1501 aa22.59■■□□□ 1.21
RTN4-210ENST00000427710 PLA2R1Q13018 1463 aa22.59■■□□□ 1.21
RTN4-210ENST00000427710 PTPRTO14522 1441 aa22.58■■□□□ 1.21
RTN4-210ENST00000427710 TET3O43151 1660 aa22.58■■□□□ 1.2
RTN4-210ENST00000427710 UBR1Q8IWV7 1749 aa22.57■■□□□ 1.2
RTN4-210ENST00000427710 GCC2Q8IWJ2 1684 aa22.57■■□□□ 1.2
RTN4-210ENST00000427710 SYNMO15061 1565 aa22.55■■□□□ 1.2
RTN4-210ENST00000427710 PIK3C2BO00750 1634 aa22.55■■□□□ 1.2
RTN4-210ENST00000427710 IQGAP3Q86VI3 1631 aa22.54■■□□□ 1.2
RTN4-210ENST00000427710 PKD2Q13563 968 aa22.54■■□□□ 1.2
RTN4-210ENST00000427710 THEMISQ8N1K5 641 aaPredicted RBP22.54■■□□□ 1.2
RTN4-210ENST00000427710 E9PCH4 1651 aa22.53■■□□□ 1.2
RTN4-210ENST00000427710 ILDR1Q86SU0 546 aaPredicted RBP22.53■■□□□ 1.2
RTN4-210ENST00000427710 NUP155O75694 1391 aa22.52■■□□□ 1.2
RTN4-210ENST00000427710 NEURL4Q96JN8 1562 aa22.52■■□□□ 1.2
RTN4-210ENST00000427710 NAIPQ13075 1403 aa22.52■■□□□ 1.2
RTN4-210ENST00000427710 MYO5BQ9ULV0 1848 aa22.5■■□□□ 1.19
RTN4-210ENST00000427710 NOS1P29475 1434 aa22.5■■□□□ 1.19
RTN4-210ENST00000427710 IDI1Q13907 227 aa22.49■■□□□ 1.19
RTN4-210ENST00000427710 ANKLE2Q86XL3 938 aa22.48■■□□□ 1.19
RTN4-210ENST00000427710 CERKQ8TCT0 537 aa22.47■■□□□ 1.19
RTN4-210ENST00000427710 STAG3Q9UJ98 1225 aa22.46■■□□□ 1.19
RTN4-210ENST00000427710 ZNF335Q9H4Z2 1342 aaPredicted RBP22.45■■□□□ 1.18
RTN4-210ENST00000427710 RPRD2Q5VT52 1461 aaKnown RBP22.45■■□□□ 1.18
RTN4-210ENST00000427710 LTBP4Q8N2S1 1624 aa22.45■■□□□ 1.18
RTN4-210ENST00000427710 HFM1A2PYH4 1435 aa22.43■■□□□ 1.18
RTN4-210ENST00000427710 IQGAP1P46940 1657 aa22.42■■□□□ 1.18
RTN4-210ENST00000427710 NPHP4O75161 1426 aaPredicted RBP22.41■■□□□ 1.18
RTN4-210ENST00000427710 LTKP29376 864 aa22.41■■□□□ 1.18
RTN4-210ENST00000427710 TRIM52Q96A61 297 aa22.4■■□□□ 1.18
RTN4-210ENST00000427710 ADGRB3O60242 1522 aa22.4■■□□□ 1.18
RTN4-210ENST00000427710 ARHGAP23Q9P227 1491 aa22.4■■□□□ 1.18
RTN4-210ENST00000427710 KDM5AP29375 1690 aaKnown RBP22.39■■□□□ 1.18
RTN4-210ENST00000427710 TXNDC2Q86VQ3 553 aa22.39■■□□□ 1.17
RTN4-210ENST00000427710 FBXO41Q8TF61 875 aa22.39■■□□□ 1.17
RTN4-210ENST00000427710 SLIT1O75093 1534 aa22.39■■□□□ 1.17
RTN4-210ENST00000427710 SPHKAPQ2M3C7 1700 aa22.38■■□□□ 1.17
RTN4-210ENST00000427710 SLC52A1Q9NWF4 448 aa22.38■■□□□ 1.17
RTN4-210ENST00000427710 MED14O60244 1454 aa22.38■■□□□ 1.17
RTN4-210ENST00000427710 SCAF11Q99590 1463 aaKnown RBP22.38■■□□□ 1.17
RTN4-210ENST00000427710 CHGAP10645 457 aaKnown RBP22.36■■□□□ 1.17
RTN4-210ENST00000427710 TMEM2Q9UHN6 1383 aa22.36■■□□□ 1.17
RTN4-210ENST00000427710 TMEM131LA2VDJ0 1609 aa22.35■■□□□ 1.17
RTN4-210ENST00000427710 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
RTN4-210ENST00000427710 STRCP1A6NGW2 1772 aa22.33■■□□□ 1.17
RTN4-210ENST00000427710 EID1Q9Y6B2 187 aa22.33■■□□□ 1.17
RTN4-210ENST00000427710 NUTM2DQ5VT03 806 aaPredicted RBP22.28■■□□□ 1.16
RTN4-210ENST00000427710 SLC4A1APQ9BWU0 796 aaKnown RBP22.27■■□□□ 1.16
RTN4-210ENST00000427710 RIMS2Q9UQ26 1411 aa22.27■■□□□ 1.16
RTN4-210ENST00000427710 CLTCL1P53675 1640 aa22.27■■□□□ 1.16
RTN4-210ENST00000427710 FOXD1Q16676 465 aa22.26■■□□□ 1.15
RTN4-210ENST00000427710 ZFYVE9O95405 1425 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms