RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 KDM5DQ9BY66 1539 aa27.67■■■□□ 2.02
HDLBP-212ENST00000426343 ABCC5O15440 1437 aa27.67■■■□□ 2.02
HDLBP-212ENST00000426343 FGD6Q6ZV73 1430 aa27.67■■■□□ 2.02
HDLBP-212ENST00000426343 FBXO31Q5XUX0 539 aaPredicted RBP27.65■■■□□ 2.02
HDLBP-212ENST00000426343 PZPP20742 1482 aa27.64■■■□□ 2.01
HDLBP-212ENST00000426343 TCOF1Q13428 1488 aaKnown RBP27.63■■■□□ 2.01
HDLBP-212ENST00000426343 PTPN23Q9H3S7 1636 aa27.63■■■□□ 2.01
HDLBP-212ENST00000426343 CAMSAP1Q5T5Y3 1602 aa27.62■■■□□ 2.01
HDLBP-212ENST00000426343 SHANK2Q9UPX8 1470 aa27.62■■■□□ 2.01
HDLBP-212ENST00000426343 TNRQ92752 1358 aa27.61■■■□□ 2.01
HDLBP-212ENST00000426343 PKD2Q13563 968 aa27.61■■■□□ 2.01
HDLBP-212ENST00000426343 DUOX2Q9NRD8 1548 aa27.6■■■□□ 2.01
HDLBP-212ENST00000426343 NCKAP5LQ9HCH0 1330 aa27.6■■■□□ 2.01
HDLBP-212ENST00000426343 KIF15Q9NS87 1388 aa27.6■■■□□ 2.01
HDLBP-212ENST00000426343 MYO3AQ8NEV4 1616 aa27.59■■■□□ 2.01
HDLBP-212ENST00000426343 DAPK1P53355 1430 aa27.59■■■□□ 2.01
HDLBP-212ENST00000426343 PLA2R1Q13018 1463 aa27.59■■■□□ 2.01
HDLBP-212ENST00000426343 RRP7BPQ9NSQ0 103 aa27.59■■■□□ 2.01
HDLBP-212ENST00000426343 CEP170BQ9Y4F5 1589 aaPredicted RBP27.59■■■□□ 2.01
HDLBP-212ENST00000426343 A2ML1A8K2U0 1454 aa27.58■■■□□ 2.01
HDLBP-212ENST00000426343 RNF17Q9BXT8 1623 aaKnown RBP27.56■■■□□ 2
HDLBP-212ENST00000426343 EIF2AK4Q9P2K8 1649 aaKnown RBP27.56■■■□□ 2
HDLBP-212ENST00000426343 ZNF142P52746 1687 aaPredicted RBP27.56■■■□□ 2
HDLBP-212ENST00000426343 ABCC3O15438 1527 aa27.53■■■□□ 2
HDLBP-212ENST00000426343 ERBINQ96RT1 1412 aa27.52■■■□□ 2
HDLBP-212ENST00000426343 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
HDLBP-212ENST00000426343 ANKRD30AQ9BXX3 1397 aa27.51■■□□□ 1.99
HDLBP-212ENST00000426343 CHIC2Q9UKJ5 165 aa27.51■■□□□ 1.99
HDLBP-212ENST00000426343 THEMISQ8N1K5 641 aaPredicted RBP27.49■■□□□ 1.99
HDLBP-212ENST00000426343 NLRP1Q9C000 1473 aa27.49■■□□□ 1.99
HDLBP-212ENST00000426343 FAM50AQ14320 339 aaKnown RBP27.48■■□□□ 1.99
HDLBP-212ENST00000426343 MROH1Q8NDA8 1641 aa27.47■■□□□ 1.99
HDLBP-212ENST00000426343 CROCC2H7BZ55 1655 aa27.46■■□□□ 1.99
HDLBP-212ENST00000426343 ZC3H13Q5T200 1668 aaKnown RBP27.45■■□□□ 1.98
HDLBP-212ENST00000426343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.44■■□□□ 1.984e-13■■■□□ 18.8
HDLBP-212ENST00000426343 LTBP4Q8N2S1 1624 aa27.44■■□□□ 1.98
HDLBP-212ENST00000426343 ANKLE2Q86XL3 938 aa27.42■■□□□ 1.98
HDLBP-212ENST00000426343 ARHGAP31Q2M1Z3 1444 aa27.41■■□□□ 1.98
HDLBP-212ENST00000426343 SPATA31D1Q6ZQQ2 1576 aa27.41■■□□□ 1.98
HDLBP-212ENST00000426343 ERVK-7P63135 1459 aa27.41■■□□□ 1.98
HDLBP-212ENST00000426343 KANK1Q14678 1352 aa27.41■■□□□ 1.98
HDLBP-212ENST00000426343 ADGRL2O95490 1459 aa27.4■■□□□ 1.98
HDLBP-212ENST00000426343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.4■■□□□ 1.982e-7■□□□□ 8.8
HDLBP-212ENST00000426343 PRDM15P57071 1507 aaPredicted RBP27.4■■□□□ 1.98
HDLBP-212ENST00000426343 ZNF335Q9H4Z2 1342 aaPredicted RBP27.39■■□□□ 1.97
HDLBP-212ENST00000426343 UGGT1Q9NYU2 1555 aa27.38■■□□□ 1.97
HDLBP-212ENST00000426343 IQSEC2Q5JU85 1478 aa27.36■■□□□ 1.97
HDLBP-212ENST00000426343 DEPDC5O75140 1603 aa27.32■■□□□ 1.96
HDLBP-212ENST00000426343 CEP152O94986 1710 aa27.31■■□□□ 1.96
HDLBP-212ENST00000426343 ANKRD50Q9ULJ7 1429 aa27.31■■□□□ 1.96
HDLBP-212ENST00000426343 LMTK2Q8IWU2 1503 aa27.3■■□□□ 1.96
HDLBP-212ENST00000426343 NEURL4Q96JN8 1562 aa27.28■■□□□ 1.96
HDLBP-212ENST00000426343 MED14O60244 1454 aa27.28■■□□□ 1.96
HDLBP-212ENST00000426343 VWDEQ8N2E2 1590 aa27.27■■□□□ 1.96
HDLBP-212ENST00000426343 NPHP4O75161 1426 aaPredicted RBP27.26■■□□□ 1.95
HDLBP-212ENST00000426343 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
HDLBP-212ENST00000426343 ROCK1Q13464 1354 aa27.24■■□□□ 1.95
HDLBP-212ENST00000426343 POLR1AO95602 1720 aaPredicted RBP27.21■■□□□ 1.95
HDLBP-212ENST00000426343 IDI1Q13907 227 aa27.2■■□□□ 1.94
HDLBP-212ENST00000426343 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
HDLBP-212ENST00000426343 STAG3Q9UJ98 1225 aa27.18■■□□□ 1.94
HDLBP-212ENST00000426343 NOS1P29475 1434 aa27.17■■□□□ 1.94
HDLBP-212ENST00000426343 UBAP1LF5GYI3 381 aa27.17■■□□□ 1.94
HDLBP-212ENST00000426343 LTKP29376 864 aa27.17■■□□□ 1.94
HDLBP-212ENST00000426343 SLC52A1Q9NWF4 448 aa27.17■■□□□ 1.94
HDLBP-212ENST00000426343 EID1Q9Y6B2 187 aa27.17■■□□□ 1.94
HDLBP-212ENST00000426343 ARHGAP23Q9P227 1491 aa27.17■■□□□ 1.94
HDLBP-212ENST00000426343 CPS1P31327 1500 aa27.16■■□□□ 1.94
HDLBP-212ENST00000426343 CFAP65Q6ZU64 1925 aaKnown RBP27.16■■□□□ 1.94
HDLBP-212ENST00000426343 UBR1Q8IWV7 1749 aa27.16■■□□□ 1.94
HDLBP-212ENST00000426343 SLIT1O75093 1534 aa27.16■■□□□ 1.94
HDLBP-212ENST00000426343 EFCAB6Q5THR3 1501 aa27.16■■□□□ 1.94
HDLBP-212ENST00000426343 SCAF11Q99590 1463 aaKnown RBP27.15■■□□□ 1.94
HDLBP-212ENST00000426343 ITGAEP38570 1179 aa27.15■■□□□ 1.94
HDLBP-212ENST00000426343 TMEM2Q9UHN6 1383 aa27.14■■□□□ 1.94
HDLBP-212ENST00000426343 RPRD2Q5VT52 1461 aaKnown RBP27.13■■□□□ 1.93
HDLBP-212ENST00000426343 IQGAP1P46940 1657 aa27.1■■□□□ 1.93
HDLBP-212ENST00000426343 PIK3C2BO00750 1634 aa27.08■■□□□ 1.93
HDLBP-212ENST00000426343 SYNMO15061 1565 aa27.07■■□□□ 1.92
HDLBP-212ENST00000426343 TOM1O60784 492 aa27.05■■□□□ 1.92
HDLBP-212ENST00000426343 RRBP1Q9P2E9 1410 aaKnown RBP27.05■■□□□ 1.92
HDLBP-212ENST00000426343 UNC13BO14795 1591 aa27.05■■□□□ 1.92
HDLBP-212ENST00000426343 NUP155O75694 1391 aa27.04■■□□□ 1.92
HDLBP-212ENST00000426343 KDM5AP29375 1690 aaKnown RBP27.04■■□□□ 1.92
HDLBP-212ENST00000426343 TET3O43151 1660 aa27.02■■□□□ 1.92
HDLBP-212ENST00000426343 ADGRB3O60242 1522 aa26.99■■□□□ 1.91
HDLBP-212ENST00000426343 HDGFP51858 240 aaKnown RBP26.97■■□□□ 1.91
HDLBP-212ENST00000426343 LRRC7Q96NW7 1537 aa26.96■■□□□ 1.91
HDLBP-212ENST00000426343 IQGAP3Q86VI3 1631 aa26.94■■□□□ 1.9
HDLBP-212ENST00000426343 PIP4K2BP78356 416 aa26.94■■□□□ 1.9
HDLBP-212ENST00000426343 GCC2Q8IWJ2 1684 aa26.93■■□□□ 1.9
HDLBP-212ENST00000426343 SCAF1Q9H7N4 1312 aaKnown RBP26.92■■□□□ 1.9
HDLBP-212ENST00000426343 SLC26A8Q96RN1 970 aa26.92■■□□□ 1.9
HDLBP-212ENST00000426343 KCNA6P17658 529 aa26.91■■□□□ 1.9
HDLBP-212ENST00000426343 ZFYVE9O95405 1425 aa26.9■■□□□ 1.9
HDLBP-212ENST00000426343 STRCP1A6NGW2 1772 aa26.89■■□□□ 1.9
HDLBP-212ENST00000426343 CHGAP10645 457 aaKnown RBP26.89■■□□□ 1.9
HDLBP-212ENST00000426343 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.89■■□□□ 1.9
HDLBP-212ENST00000426343 BCANQ96GW7 911 aa26.89■■□□□ 1.9
HDLBP-212ENST00000426343 RIMS2Q9UQ26 1411 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms