RNA–Protein interactions for RNA: ENST00000425970.5

GARNL3-203, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-203ENST00000425970 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
GARNL3-203ENST00000425970 EPAS1Q99814 870 aa8.98□□□□□ -0.97
GARNL3-203ENST00000425970 NBPF3Q9H094 633 aa8.98□□□□□ -0.97
GARNL3-203ENST00000425970 PPP1R3GB7ZBB8 358 aa8.97□□□□□ -0.97
GARNL3-203ENST00000425970 E2F4Q16254 413 aa8.97□□□□□ -0.97
GARNL3-203ENST00000425970 MRPL50Q8N5N7 158 aaKnown RBP8.97□□□□□ -0.97
GARNL3-203ENST00000425970 ZBED2Q9BTP6 218 aa8.97□□□□□ -0.97
GARNL3-203ENST00000425970 UNC13AQ9UPW8 1703 aa8.97□□□□□ -0.97
GARNL3-203ENST00000425970 SPDYE16A6NNV3 312 aaPredicted RBP8.94□□□□□ -0.98
GARNL3-203ENST00000425970 DDX12PQ92771 950 aa8.94□□□□□ -0.98
GARNL3-203ENST00000425970 RBM33Q96EV2 1170 aaKnown RBP8.93□□□□□ -0.98
GARNL3-203ENST00000425970 PDIA6Q15084 440 aa8.92□□□□□ -0.98
GARNL3-203ENST00000425970 NBR1Q14596 966 aa8.91□□□□□ -0.98
GARNL3-203ENST00000425970 C6orf132Q5T0Z8 1188 aa8.91□□□□□ -0.98
GARNL3-203ENST00000425970 WNT2BQ93097 391 aa8.91□□□□□ -0.98
GARNL3-203ENST00000425970 PLA2G2EQ9NZK7 142 aa8.91□□□□□ -0.98
GARNL3-203ENST00000425970 BHMG1C9JSJ3 638 aaPredicted RBP8.9□□□□□ -0.98
GARNL3-203ENST00000425970 MAP3K7O43318 606 aa8.9□□□□□ -0.98
GARNL3-203ENST00000425970 PTPN5P54829 565 aa8.9□□□□□ -0.98
GARNL3-203ENST00000425970 RABGEF1Q9UJ41 708 aa8.9□□□□□ -0.98
GARNL3-203ENST00000425970 NACADO15069 1562 aa8.9□□□□□ -0.99
GARNL3-203ENST00000425970 COL9A1P20849 921 aa8.89□□□□□ -0.99
GARNL3-203ENST00000425970 PROX2Q3B8N5 592 aa8.89□□□□□ -0.99
GARNL3-203ENST00000425970 ANKK1Q8NFD2 765 aa8.87□□□□□ -0.99
GARNL3-203ENST00000425970 THSD4Q6ZMP0 1018 aa8.86□□□□□ -0.99
GARNL3-203ENST00000425970 KIAA1468Q9P260 1216 aa8.86□□□□□ -0.99
GARNL3-203ENST00000425970 GRXCR2A6NFK2 248 aa8.85□□□□□ -0.99
GARNL3-203ENST00000425970 EN1Q05925 392 aaPredicted RBP8.85□□□□□ -0.99
GARNL3-203ENST00000425970 LAPTM4BQ86VI4 370 aa8.85□□□□□ -0.99
GARNL3-203ENST00000425970 ARIH1Q9Y4X5 557 aaPredicted RBP8.85□□□□□ -0.99
GARNL3-203ENST00000425970 ONECUT3O60422 494 aaPredicted RBP8.84□□□□□ -0.99
GARNL3-203ENST00000425970 TRIM6-TRIM34B2RNG4 842 aa8.83□□□□□ -1
GARNL3-203ENST00000425970 TSHZ2Q9NRE2 1034 aa8.83□□□□□ -1
GARNL3-203ENST00000425970 PACS2Q86VP3 889 aa8.82□□□□□ -1
GARNL3-203ENST00000425970 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
GARNL3-203ENST00000425970 CERKQ8TCT0 537 aa8.8□□□□□ -1
GARNL3-203ENST00000425970 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
GARNL3-203ENST00000425970 FAM98CQ17RN3 349 aaKnown RBP8.79□□□□□ -1
GARNL3-203ENST00000425970 ZFRQ96KR1 1074 aaKnown RBP8.79□□□□□ -1
GARNL3-203ENST00000425970 BCAMP50895 628 aa8.77□□□□□ -1.01
GARNL3-203ENST00000425970 SOWAHBA6NEL2 793 aa8.76□□□□□ -1.01
GARNL3-203ENST00000425970 PRSS12P56730 875 aa8.76□□□□□ -1.01
GARNL3-203ENST00000425970 ARHGEF1Q92888 912 aaKnown RBP8.76□□□□□ -1.01
GARNL3-203ENST00000425970 CDCA7LQ96GN5 454 aa8.76□□□□□ -1.01
GARNL3-203ENST00000425970 LRCH3Q96II8 777 aa8.76□□□□□ -1.01
GARNL3-203ENST00000425970 NYAP1Q6ZVC0 841 aa8.75□□□□□ -1.01
GARNL3-203ENST00000425970 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.75□□□□□ -1.01
GARNL3-203ENST00000425970 NBPF26B4DH59 902 aa8.74□□□□□ -1.01
GARNL3-203ENST00000425970 OSBPP22059 807 aa8.74□□□□□ -1.01
GARNL3-203ENST00000425970 P3H3Q8IVL6 736 aa8.74□□□□□ -1.01
GARNL3-203ENST00000425970 TSKSQ9UJT2 592 aa8.74□□□□□ -1.01
GARNL3-203ENST00000425970 MYO15BQ96JP2 1530 aa8.73□□□□□ -1.01
GARNL3-203ENST00000425970 KCNV2Q8TDN2 545 aa8.72□□□□□ -1.01
GARNL3-203ENST00000425970 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.02
GARNL3-203ENST00000425970 HDGFP51858 240 aaKnown RBP8.71□□□□□ -1.02
GARNL3-203ENST00000425970 TSR3Q9UJK0 312 aaKnown RBP8.71□□□□□ -1.02
GARNL3-203ENST00000425970 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
GARNL3-203ENST00000425970 CDHR5Q9HBB8 845 aa8.7□□□□□ -1.02
GARNL3-203ENST00000425970 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
GARNL3-203ENST00000425970 RBM27Q9P2N5 1060 aaKnown RBP8.7□□□□□ -1.02
GARNL3-203ENST00000425970 HPS5Q9UPZ3 1129 aa8.7□□□□□ -1.02
GARNL3-203ENST00000425970 SHROOM4Q9ULL8 1493 aa8.7□□□□□ -1.02
GARNL3-203ENST00000425970 SMAPO00193 183 aa8.69□□□□□ -1.02
GARNL3-203ENST00000425970 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
GARNL3-203ENST00000425970 TATDN2Q93075 761 aa8.69□□□□□ -1.02
GARNL3-203ENST00000425970 PNMA3Q9UL41 463 aa8.69□□□□□ -1.02
GARNL3-203ENST00000425970 BICRAQ9NZM4 1560 aa8.69□□□□□ -1.02
GARNL3-203ENST00000425970 PPP4CP60510 307 aa8.68□□□□□ -1.02
GARNL3-203ENST00000425970 MLLT3P42568 568 aaPredicted RBP8.66□□□□□ -1.02
GARNL3-203ENST00000425970 SLC4A3P48751 1232 aa8.66□□□□□ -1.02
GARNL3-203ENST00000425970 NUDT18Q6ZVK8 323 aa8.66□□□□□ -1.02
GARNL3-203ENST00000425970 SAMD7Q7Z3H4 446 aa8.66□□□□□ -1.02
GARNL3-203ENST00000425970 RNF40O75150 1001 aa8.65□□□□□ -1.02
GARNL3-203ENST00000425970 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.02
GARNL3-203ENST00000425970 A0A0G2JS52 829 aa8.64□□□□□ -1.03
GARNL3-203ENST00000425970 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-203ENST00000425970 PADI6Q6TGC4 694 aa8.64□□□□□ -1.03
GARNL3-203ENST00000425970 RGS20O76081 388 aa8.63□□□□□ -1.03
GARNL3-203ENST00000425970 KCNC4Q03721 635 aa8.63□□□□□ -1.03
GARNL3-203ENST00000425970 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
GARNL3-203ENST00000425970 NUTM2FA1L443 756 aa8.62□□□□□ -1.03
GARNL3-203ENST00000425970 NPDC1Q9NQX5 325 aaPredicted RBP8.61□□□□□ -1.03
GARNL3-203ENST00000425970 HAP1P54257 671 aaPredicted RBP8.6□□□□□ -1.03
GARNL3-203ENST00000425970 C3orf80F5H4A9 247 aa8.59□□□□□ -1.03
GARNL3-203ENST00000425970 SLF2Q8IX21 1173 aa8.59□□□□□ -1.03
GARNL3-203ENST00000425970 TTC13Q8NBP0 860 aa8.59□□□□□ -1.03
GARNL3-203ENST00000425970 SEMA3EO15041 775 aa8.58□□□□□ -1.04
GARNL3-203ENST00000425970 SMYD5Q6GMV2 418 aa8.58□□□□□ -1.04
GARNL3-203ENST00000425970 CC2D2AQ9P2K1 1620 aa8.58□□□□□ -1.04
GARNL3-203ENST00000425970 PTGDRQ13258 359 aa8.57□□□□□ -1.04
GARNL3-203ENST00000425970 RBM46Q8TBY0 533 aaKnown RBP8.57□□□□□ -1.04
GARNL3-203ENST00000425970 FCHSD2O94868 740 aa8.56□□□□□ -1.04
GARNL3-203ENST00000425970 SWT1Q5T5J6 900 aaKnown RBP8.56□□□□□ -1.04
GARNL3-203ENST00000425970 DCAF1Q9Y4B6 1507 aa8.54□□□□□ -1.04
GARNL3-203ENST00000425970 DNAJB2P25686 324 aa8.53□□□□□ -1.04
GARNL3-203ENST00000425970 EYA1Q99502 592 aa8.53□□□□□ -1.04
GARNL3-203ENST00000425970 MTRQ99707 1265 aa8.53□□□□□ -1.04
GARNL3-203ENST00000425970 PRR14Q9BWN1 585 aa8.53□□□□□ -1.04
GARNL3-203ENST00000425970 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
GARNL3-203ENST00000425970 EIF4G1Q04637 1599 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms