RNA–Protein interactions for RNA: ENST00000425184.5

RBM39-210, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-210ENST00000425184 RBM33Q96EV2 1170 aaKnown RBP9.89□□□□□ -0.83
RBM39-210ENST00000425184 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
RBM39-210ENST00000425184 MAP3K7O43318 606 aa9.87□□□□□ -0.83
RBM39-210ENST00000425184 EN1Q05925 392 aaPredicted RBP9.87□□□□□ -0.83
RBM39-210ENST00000425184 TK2O00142 265 aa9.86□□□□□ -0.83
RBM39-210ENST00000425184 C6orf132Q5T0Z8 1188 aa9.86□□□□□ -0.83
RBM39-210ENST00000425184 ADGRD1Q6QNK2 874 aa9.86□□□□□ -0.83
RBM39-210ENST00000425184 PPP1R3GB7ZBB8 358 aa9.85□□□□□ -0.83
RBM39-210ENST00000425184 OSBPP22059 807 aa9.85□□□□□ -0.83
RBM39-210ENST00000425184 MLLT3P42568 568 aaPredicted RBP9.85□□□□□ -0.83
RBM39-210ENST00000425184 SEMA3EO15041 775 aa9.84□□□□□ -0.83
RBM39-210ENST00000425184 SLC4A5Q9BY07 1137 aa9.84□□□□□ -0.83
RBM39-210ENST00000425184 COL9A1P20849 921 aa9.82□□□□□ -0.84
RBM39-210ENST00000425184 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
RBM39-210ENST00000425184 TSR1Q2NL82 804 aaKnown RBP9.82□□□□□ -0.84
RBM39-210ENST00000425184 VPS9D1Q9Y2B5 631 aa9.82□□□□□ -0.84
RBM39-210ENST00000425184 ZBED2Q9BTP6 218 aa9.81□□□□□ -0.84
RBM39-210ENST00000425184 MMRN1Q13201 1228 aa9.8□□□□□ -0.84
RBM39-210ENST00000425184 TESPA1A2RU30 521 aaPredicted RBP9.79□□□□□ -0.84
RBM39-210ENST00000425184 SMYD5Q6GMV2 418 aa9.79□□□□□ -0.84
RBM39-210ENST00000425184 STAC3Q96MF2 364 aa9.79□□□□□ -0.84
RBM39-210ENST00000425184 MYT1LQ9UL68 1186 aa9.79□□□□□ -0.84
RBM39-210ENST00000425184 HRO43593 1189 aa9.78□□□□□ -0.84
RBM39-210ENST00000425184 CERKQ8TCT0 537 aa9.78□□□□□ -0.84
RBM39-210ENST00000425184 PROX2Q3B8N5 592 aa9.76□□□□□ -0.85
RBM39-210ENST00000425184 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
RBM39-210ENST00000425184 CDHR5Q9HBB8 845 aa9.75□□□□□ -0.85
RBM39-210ENST00000425184 RABGEF1Q9UJ41 708 aa9.75□□□□□ -0.85
RBM39-210ENST00000425184 ONECUT3O60422 494 aaPredicted RBP9.74□□□□□ -0.85
RBM39-210ENST00000425184 RNF166Q96A37 237 aaPredicted RBP9.74□□□□□ -0.85
RBM39-210ENST00000425184 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
RBM39-210ENST00000425184 TRIM6-TRIM34B2RNG4 842 aa9.73□□□□□ -0.85
RBM39-210ENST00000425184 BHMG1C9JSJ3 638 aaPredicted RBP9.72□□□□□ -0.85
RBM39-210ENST00000425184 PRSS12P56730 875 aa9.72□□□□□ -0.85
RBM39-210ENST00000425184 KIAA1468Q9P260 1216 aa9.72□□□□□ -0.85
RBM39-210ENST00000425184 NUTM2FA1L443 756 aa9.71□□□□□ -0.86
RBM39-210ENST00000425184 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
RBM39-210ENST00000425184 MRPL50Q8N5N7 158 aaKnown RBP9.71□□□□□ -0.86
RBM39-210ENST00000425184 CDCA7LQ96GN5 454 aa9.71□□□□□ -0.86
RBM39-210ENST00000425184 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
RBM39-210ENST00000425184 NPDC1Q9NQX5 325 aaPredicted RBP9.7□□□□□ -0.86
RBM39-210ENST00000425184 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
RBM39-210ENST00000425184 RBM27Q9P2N5 1060 aaKnown RBP9.69□□□□□ -0.86
RBM39-210ENST00000425184 GOLGA8CPA6NN73 597 aa9.68□□□□□ -0.86
RBM39-210ENST00000425184 PTGDRQ13258 359 aa9.68□□□□□ -0.86
RBM39-210ENST00000425184 TSKSQ9UJT2 592 aa9.68□□□□□ -0.86
RBM39-210ENST00000425184 FCHSD2O94868 740 aa9.66□□□□□ -0.86
RBM39-210ENST00000425184 LAPTM4BQ86VI4 370 aa9.66□□□□□ -0.86
RBM39-210ENST00000425184 PADI6Q6TGC4 694 aa9.65□□□□□ -0.86
RBM39-210ENST00000425184 KCTD12Q96CX2 325 aaKnown RBP9.65□□□□□ -0.86
RBM39-210ENST00000425184 NBPF26B4DH59 902 aa9.64□□□□□ -0.87
RBM39-210ENST00000425184 FAM198AQ9UFP1 575 aa9.64□□□□□ -0.87
RBM39-210ENST00000425184 SEPT9Q9UHD8 586 aaPredicted RBP9.64□□□□□ -0.87
RBM39-210ENST00000425184 TTC13Q8NBP0 860 aa9.63□□□□□ -0.87
RBM39-210ENST00000425184 WNT2BQ93097 391 aa9.63□□□□□ -0.87
RBM39-210ENST00000425184 FAM98CQ17RN3 349 aaKnown RBP9.62□□□□□ -0.87
RBM39-210ENST00000425184 TATDN2Q93075 761 aa9.62□□□□□ -0.87
RBM39-210ENST00000425184 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
RBM39-210ENST00000425184 ANKK1Q8NFD2 765 aa9.61□□□□□ -0.87
RBM39-210ENST00000425184 PNMA3Q9UL41 463 aa9.61□□□□□ -0.87
RBM39-210ENST00000425184 HIC1Q14526 733 aa9.6□□□□□ -0.87
RBM39-210ENST00000425184 ZFRQ96KR1 1074 aaKnown RBP9.6□□□□□ -0.87
RBM39-210ENST00000425184 SMAPO00193 183 aa9.59□□□□□ -0.87
RBM39-210ENST00000425184 NUDT18Q6ZVK8 323 aa9.59□□□□□ -0.87
RBM39-210ENST00000425184 HCSTQ9UBK5 93 aa9.59□□□□□ -0.87
RBM39-210ENST00000425184 THSD4Q6ZMP0 1018 aa9.58□□□□□ -0.88
RBM39-210ENST00000425184 C3orf80F5H4A9 247 aa9.57□□□□□ -0.88
RBM39-210ENST00000425184 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.57□□□□□ -0.88
RBM39-210ENST00000425184 GNPATO15228 680 aa9.56□□□□□ -0.88
RBM39-210ENST00000425184 GPR37O15354 613 aa9.56□□□□□ -0.88
RBM39-210ENST00000425184 LRCH3Q96II8 777 aa9.55□□□□□ -0.88
RBM39-210ENST00000425184 ADGRG1Q9Y653 693 aa9.55□□□□□ -0.88
RBM39-210ENST00000425184 SOWAHBA6NEL2 793 aa9.54□□□□□ -0.88
RBM39-210ENST00000425184 PTPN5P54829 565 aa9.54□□□□□ -0.88
RBM39-210ENST00000425184 LMOD2Q6P5Q4 547 aa9.54□□□□□ -0.88
RBM39-210ENST00000425184 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
RBM39-210ENST00000425184 EYA1Q99502 592 aa9.54□□□□□ -0.88
RBM39-210ENST00000425184 BCAMP50895 628 aa9.53□□□□□ -0.88
RBM39-210ENST00000425184 HDGFP51858 240 aaKnown RBP9.53□□□□□ -0.88
RBM39-210ENST00000425184 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.53□□□□□ -0.88
RBM39-210ENST00000425184 OATP04181 439 aa9.51□□□□□ -0.89
RBM39-210ENST00000425184 FAM161AQ3B820 660 aa9.51□□□□□ -0.89
RBM39-210ENST00000425184 SAMD7Q7Z3H4 446 aa9.51□□□□□ -0.89
RBM39-210ENST00000425184 FECHP22830 423 aa9.5□□□□□ -0.89
RBM39-210ENST00000425184 BCANQ96GW7 911 aa9.49□□□□□ -0.89
RBM39-210ENST00000425184 TSR3Q9UJK0 312 aaKnown RBP9.49□□□□□ -0.89
RBM39-210ENST00000425184 DNAJB2P25686 324 aa9.48□□□□□ -0.89
RBM39-210ENST00000425184 SLC4A3P48751 1232 aa9.48□□□□□ -0.89
RBM39-210ENST00000425184 HPS5Q9UPZ3 1129 aa9.48□□□□□ -0.89
RBM39-210ENST00000425184 RCCD1A6NED2 376 aa9.46□□□□□ -0.9
RBM39-210ENST00000425184 RNF40O75150 1001 aa9.46□□□□□ -0.9
RBM39-210ENST00000425184 SWT1Q5T5J6 900 aaKnown RBP9.46□□□□□ -0.9
RBM39-210ENST00000425184 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
RBM39-210ENST00000425184 METTL3Q86U44 580 aaKnown RBP9.46□□□□□ -0.9
RBM39-210ENST00000425184 PXYLP1Q8TE99 480 aa9.46□□□□□ -0.9
RBM39-210ENST00000425184 WBP1LQ9NX94 342 aa9.46□□□□□ -0.9
RBM39-210ENST00000425184 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.45□□□□□ -0.9
RBM39-210ENST00000425184 PPP4CP60510 307 aa9.45□□□□□ -0.9
RBM39-210ENST00000425184 MAP2K5Q13163 448 aa9.45□□□□□ -0.9
RBM39-210ENST00000425184 SLF2Q8IX21 1173 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms