RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 IQGAP3Q86VI3 1631 aa13.39□□□□□ -0.27
LINC01399-201ENST00000423311 TRIM52Q96A61 297 aa13.38□□□□□ -0.27
LINC01399-201ENST00000423311 RNF17Q9BXT8 1623 aaKnown RBP13.38□□□□□ -0.27
LINC01399-201ENST00000423311 COL17A1Q9UMD9 1497 aaPredicted RBP13.37□□□□□ -0.27
LINC01399-201ENST00000423311 PZPP20742 1482 aa13.36□□□□□ -0.27
LINC01399-201ENST00000423311 ATP10AO60312 1499 aa13.36□□□□□ -0.27
LINC01399-201ENST00000423311 NUP155O75694 1391 aa13.35□□□□□ -0.27
LINC01399-201ENST00000423311 PRDM15P57071 1507 aaPredicted RBP13.35□□□□□ -0.27
LINC01399-201ENST00000423311 ARHGEF40Q8TER5 1519 aa13.35□□□□□ -0.27
LINC01399-201ENST00000423311 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
LINC01399-201ENST00000423311 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
LINC01399-201ENST00000423311 VWDEQ8N2E2 1590 aa13.34□□□□□ -0.27
LINC01399-201ENST00000423311 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
LINC01399-201ENST00000423311 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.28
LINC01399-201ENST00000423311 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
LINC01399-201ENST00000423311 AGLP35573 1532 aa13.33□□□□□ -0.28
LINC01399-201ENST00000423311 TET3O43151 1660 aa13.31□□□□□ -0.28
LINC01399-201ENST00000423311 KIF3BO15066 747 aa13.31□□□□□ -0.28
LINC01399-201ENST00000423311 KANK1Q14678 1352 aa13.31□□□□□ -0.28
LINC01399-201ENST00000423311 ZC3H13Q5T200 1668 aaKnown RBP13.3□□□□□ -0.28
LINC01399-201ENST00000423311 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
LINC01399-201ENST00000423311 TIMELESSQ9UNS1 1208 aa13.27□□□□□ -0.29
LINC01399-201ENST00000423311 ANKRD30BQ9BXX2 1392 aa13.27□□□□□ -0.29
LINC01399-201ENST00000423311 CEP152O94986 1710 aa13.27□□□□□ -0.29
LINC01399-201ENST00000423311 E9PCH4 1651 aa13.26□□□□□ -0.29
LINC01399-201ENST00000423311 PKD2Q13563 968 aa13.26□□□□□ -0.29
LINC01399-201ENST00000423311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC01399-201ENST00000423311 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
LINC01399-201ENST00000423311 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
LINC01399-201ENST00000423311 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
LINC01399-201ENST00000423311 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
LINC01399-201ENST00000423311 SPHKAPQ2M3C7 1700 aa13.23□□□□□ -0.29
LINC01399-201ENST00000423311 ABCC3O15438 1527 aa13.23□□□□□ -0.29
LINC01399-201ENST00000423311 CAMSAP1Q5T5Y3 1602 aa13.22□□□□□ -0.29
LINC01399-201ENST00000423311 GGT6Q6P531 493 aa13.21□□□□□ -0.29
LINC01399-201ENST00000423311 WASHC2CQ9Y4E1 1318 aa13.2□□□□□ -0.3
LINC01399-201ENST00000423311 FOXD1Q16676 465 aa13.2□□□□□ -0.3
LINC01399-201ENST00000423311 PTPRTO14522 1441 aa13.2□□□□□ -0.3
LINC01399-201ENST00000423311 ARHGAP31Q2M1Z3 1444 aa13.2□□□□□ -0.3
LINC01399-201ENST00000423311 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
LINC01399-201ENST00000423311 TRPM2O94759 1503 aa13.18□□□□□ -0.3
LINC01399-201ENST00000423311 PLA2R1Q13018 1463 aa13.17□□□□□ -0.3
LINC01399-201ENST00000423311 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
LINC01399-201ENST00000423311 CLTCQ00610 1675 aaKnown RBP13.17□□□□□ -0.3
LINC01399-201ENST00000423311 TONSLQ96HA7 1378 aa13.17□□□□□ -0.3
LINC01399-201ENST00000423311 CCDC144AA2RUR9 1427 aa13.16□□□□□ -0.3
LINC01399-201ENST00000423311 MROH2AA6NES4 1674 aa13.16□□□□□ -0.3
LINC01399-201ENST00000423311 CFAP65Q6ZU64 1925 aaKnown RBP13.15□□□□□ -0.3
LINC01399-201ENST00000423311 NPATQ14207 1427 aa13.15□□□□□ -0.3
LINC01399-201ENST00000423311 NEURL4Q96JN8 1562 aa13.15□□□□□ -0.3
LINC01399-201ENST00000423311 KIF1BO60333 1816 aa13.14□□□□□ -0.31
LINC01399-201ENST00000423311 PREX1Q8TCU6 1659 aa13.14□□□□□ -0.31
LINC01399-201ENST00000423311 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
LINC01399-201ENST00000423311 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
LINC01399-201ENST00000423311 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
LINC01399-201ENST00000423311 NOS1P29475 1434 aa13.12□□□□□ -0.31
LINC01399-201ENST00000423311 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
LINC01399-201ENST00000423311 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
LINC01399-201ENST00000423311 PPP1R15AO75807 674 aaPredicted RBP13.1□□□□□ -0.31
LINC01399-201ENST00000423311 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
LINC01399-201ENST00000423311 SYNMO15061 1565 aa13.08□□□□□ -0.32
LINC01399-201ENST00000423311 SPATA31D1Q6ZQQ2 1576 aa13.08□□□□□ -0.32
LINC01399-201ENST00000423311 SPATA31E1Q6ZUB1 1445 aa13.07□□□□□ -0.32
LINC01399-201ENST00000423311 MLECQ14165 292 aa13.07□□□□□ -0.32
LINC01399-201ENST00000423311 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
LINC01399-201ENST00000423311 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
LINC01399-201ENST00000423311 STAC3Q96MF2 364 aa13.06□□□□□ -0.32
LINC01399-201ENST00000423311 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
LINC01399-201ENST00000423311 ZMYM3Q14202 1370 aa13.06□□□□□ -0.32
LINC01399-201ENST00000423311 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
LINC01399-201ENST00000423311 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
LINC01399-201ENST00000423311 C3P01024 1663 aa13.05□□□□□ -0.32
LINC01399-201ENST00000423311 ADGRB3O60242 1522 aa13.04□□□□□ -0.32
LINC01399-201ENST00000423311 UGGT1Q9NYU2 1555 aa13.04□□□□□ -0.32
LINC01399-201ENST00000423311 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
LINC01399-201ENST00000423311 KDM5AP29375 1690 aaKnown RBP13.03□□□□□ -0.32
LINC01399-201ENST00000423311 UHRF1BP1Q6BDS2 1440 aa13.03□□□□□ -0.32
LINC01399-201ENST00000423311 MADDQ8WXG6 1647 aa13.02□□□□□ -0.33
LINC01399-201ENST00000423311 TMEM131LA2VDJ0 1609 aa13.01□□□□□ -0.33
LINC01399-201ENST00000423311 PPLO60437 1756 aa13.01□□□□□ -0.33
LINC01399-201ENST00000423311 MYO5BQ9ULV0 1848 aa13.01□□□□□ -0.33
LINC01399-201ENST00000423311 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
LINC01399-201ENST00000423311 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
LINC01399-201ENST00000423311 DCAF11Q8TEB1 546 aa13□□□□□ -0.33
LINC01399-201ENST00000423311 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
LINC01399-201ENST00000423311 MYOM2P54296 1465 aa12.98□□□□□ -0.33
LINC01399-201ENST00000423311 IDI1Q13907 227 aa12.98□□□□□ -0.33
LINC01399-201ENST00000423311 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
LINC01399-201ENST00000423311 TNRQ92752 1358 aa12.97□□□□□ -0.33
LINC01399-201ENST00000423311 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
LINC01399-201ENST00000423311 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
LINC01399-201ENST00000423311 SETD1BQ9UPS6 1966 aaKnown RBP12.97□□□□□ -0.33
LINC01399-201ENST00000423311 NLRP1Q9C000 1473 aa12.97□□□□□ -0.33
LINC01399-201ENST00000423311 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.33
LINC01399-201ENST00000423311 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.34
LINC01399-201ENST00000423311 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
LINC01399-201ENST00000423311 UBR1Q8IWV7 1749 aa12.95□□□□□ -0.34
LINC01399-201ENST00000423311 NRXN1Q9ULB1 1477 aa12.95□□□□□ -0.34
LINC01399-201ENST00000423311 LAMC1P11047 1609 aa12.95□□□□□ -0.34
LINC01399-201ENST00000423311 NEXMIFQ5QGS0 1516 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms