RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 PRG4Q92954 1404 aaPredicted RBP16.85■□□□□ 0.29
CTCFL-204ENST00000422869 GPATCH8Q9UKJ3 1502 aaKnown RBP16.84■□□□□ 0.29
CTCFL-204ENST00000422869 NLRP13Q86W25 1043 aa16.83■□□□□ 0.29
CTCFL-204ENST00000422869 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.29
CTCFL-204ENST00000422869 CFDP1Q9UEE9 299 aaPredicted RBP16.83■□□□□ 0.29
CTCFL-204ENST00000422869 ANKRD50Q9ULJ7 1429 aa16.83■□□□□ 0.29
CTCFL-204ENST00000422869 TROQ12816 1431 aaPredicted RBP16.83■□□□□ 0.28
CTCFL-204ENST00000422869 SKAP1Q86WV1 359 aa16.83■□□□□ 0.28
CTCFL-204ENST00000422869 CEP170Q5SW79 1584 aa16.82■□□□□ 0.28
CTCFL-204ENST00000422869 ADCY10Q96PN6 1610 aa16.82■□□□□ 0.28
CTCFL-204ENST00000422869 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
CTCFL-204ENST00000422869 PLIN1O60240 522 aa16.81■□□□□ 0.28
CTCFL-204ENST00000422869 KDM5DQ9BY66 1539 aa16.79■□□□□ 0.28
CTCFL-204ENST00000422869 BLMP54132 1417 aaPredicted RBP16.78■□□□□ 0.28
CTCFL-204ENST00000422869 KDM2AQ9Y2K7 1162 aa16.78■□□□□ 0.28
CTCFL-204ENST00000422869 NUP155O75694 1391 aa16.78■□□□□ 0.28
CTCFL-204ENST00000422869 CDC42BPAQ5VT25 1732 aa16.78■□□□□ 0.28
CTCFL-204ENST00000422869 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
CTCFL-204ENST00000422869 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
CTCFL-204ENST00000422869 ZNF777Q9ULD5 760 aaPredicted RBP16.77■□□□□ 0.28
CTCFL-204ENST00000422869 TRPM1Q7Z4N2 1603 aa16.77■□□□□ 0.28
CTCFL-204ENST00000422869 PER1O15534 1290 aaPredicted RBP16.77■□□□□ 0.27
CTCFL-204ENST00000422869 ZMYM4Q5VZL5 1548 aa16.76■□□□□ 0.27
CTCFL-204ENST00000422869 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
CTCFL-204ENST00000422869 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
CTCFL-204ENST00000422869 INSRP06213 1382 aa16.75■□□□□ 0.27
CTCFL-204ENST00000422869 GSE1Q14687 1217 aa16.74■□□□□ 0.27
CTCFL-204ENST00000422869 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
CTCFL-204ENST00000422869 NFKBIBQ15653 356 aa16.74■□□□□ 0.27
CTCFL-204ENST00000422869 BRPF3Q9ULD4 1205 aa16.74■□□□□ 0.27
CTCFL-204ENST00000422869 KDM2BQ8NHM5 1336 aa16.74■□□□□ 0.27
CTCFL-204ENST00000422869 PTPRGP23470 1445 aa16.73■□□□□ 0.27
CTCFL-204ENST00000422869 C9orf84Q5VXU9 1444 aa16.72■□□□□ 0.27
CTCFL-204ENST00000422869 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
CTCFL-204ENST00000422869 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.27
CTCFL-204ENST00000422869 PLEKHH2Q8IVE3 1493 aa16.71■□□□□ 0.27
CTCFL-204ENST00000422869 PRAG1Q86YV5 1406 aa16.71■□□□□ 0.27
CTCFL-204ENST00000422869 SLC4A3P48751 1232 aa16.71■□□□□ 0.26
CTCFL-204ENST00000422869 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
CTCFL-204ENST00000422869 COL17A1Q9UMD9 1497 aaPredicted RBP16.7■□□□□ 0.26
CTCFL-204ENST00000422869 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
CTCFL-204ENST00000422869 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
CTCFL-204ENST00000422869 UBE2Q2Q8WVN8 375 aa16.68■□□□□ 0.26
CTCFL-204ENST00000422869 FRAT1Q92837 279 aaPredicted RBP16.67■□□□□ 0.26
CTCFL-204ENST00000422869 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
CTCFL-204ENST00000422869 DISP3Q9P2K9 1392 aa16.67■□□□□ 0.26
CTCFL-204ENST00000422869 LAMC1P11047 1609 aa16.66■□□□□ 0.26
CTCFL-204ENST00000422869 C8orf34Q49A92 452 aa16.66■□□□□ 0.26
CTCFL-204ENST00000422869 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
CTCFL-204ENST00000422869 PRDM15P57071 1507 aaPredicted RBP16.66■□□□□ 0.26
CTCFL-204ENST00000422869 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
CTCFL-204ENST00000422869 GPRASP1Q5JY77 1395 aa16.66■□□□□ 0.26
CTCFL-204ENST00000422869 NBPF1Q3BBV0 1214 aa16.65■□□□□ 0.26
CTCFL-204ENST00000422869 CENPQQ7L2Z9 268 aaPredicted RBP16.65■□□□□ 0.26
CTCFL-204ENST00000422869 ABCC10Q5T3U5 1492 aa16.64■□□□□ 0.26
CTCFL-204ENST00000422869 FAM135AQ9P2D6 1515 aa16.64■□□□□ 0.25
CTCFL-204ENST00000422869 TESK2Q96S53 571 aa16.64■□□□□ 0.25
CTCFL-204ENST00000422869 FAM161AQ3B820 660 aa16.63■□□□□ 0.25
CTCFL-204ENST00000422869 PANK3Q9H999 370 aa16.62■□□□□ 0.25
CTCFL-204ENST00000422869 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
CTCFL-204ENST00000422869 MYO5CQ9NQX4 1742 aa16.61■□□□□ 0.25
CTCFL-204ENST00000422869 A2MP01023 1474 aa16.61■□□□□ 0.25
CTCFL-204ENST00000422869 PLEKHH1Q9ULM0 1364 aa16.61■□□□□ 0.25
CTCFL-204ENST00000422869 ADAMTS8Q9UP79 889 aa16.61■□□□□ 0.25
CTCFL-204ENST00000422869 DUSP27Q5VZP5 1158 aa16.6■□□□□ 0.25
CTCFL-204ENST00000422869 CCDC144AA2RUR9 1427 aa16.6■□□□□ 0.25
CTCFL-204ENST00000422869 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
CTCFL-204ENST00000422869 ERBINQ96RT1 1412 aa16.6■□□□□ 0.25
CTCFL-204ENST00000422869 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
CTCFL-204ENST00000422869 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
CTCFL-204ENST00000422869 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
CTCFL-204ENST00000422869 VIRMAQ69YN4 1812 aaKnown RBP16.58■□□□□ 0.25
CTCFL-204ENST00000422869 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
CTCFL-204ENST00000422869 PLA2R1Q13018 1463 aa16.58■□□□□ 0.24
CTCFL-204ENST00000422869 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
CTCFL-204ENST00000422869 ZNF521Q96K83 1311 aa16.57■□□□□ 0.24
CTCFL-204ENST00000422869 ABCA8O94911 1581 aa16.57■□□□□ 0.24
CTCFL-204ENST00000422869 RGL3Q3MIN7 710 aa16.56■□□□□ 0.24
CTCFL-204ENST00000422869 EIF2AK4Q9P2K8 1649 aaKnown RBP16.55■□□□□ 0.24
CTCFL-204ENST00000422869 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
CTCFL-204ENST00000422869 CLASP1Q7Z460 1538 aa16.54■□□□□ 0.24
CTCFL-204ENST00000422869 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
CTCFL-204ENST00000422869 MAGI2Q86UL8 1455 aa16.53■□□□□ 0.24
CTCFL-204ENST00000422869 RNF17Q9BXT8 1623 aaKnown RBP16.53■□□□□ 0.24
CTCFL-204ENST00000422869 PLEKHD1A6NEE1 506 aa16.53■□□□□ 0.24
CTCFL-204ENST00000422869 UNC13BO14795 1591 aa16.53■□□□□ 0.24
CTCFL-204ENST00000422869 WDR7Q9Y4E6 1490 aa16.53■□□□□ 0.24
CTCFL-204ENST00000422869 RGS3P49796 1198 aa16.53■□□□□ 0.24
CTCFL-204ENST00000422869 TMF1P82094 1093 aa16.53■□□□□ 0.24
CTCFL-204ENST00000422869 ATP10BO94823 1461 aa16.52■□□□□ 0.24
CTCFL-204ENST00000422869 SAMD9LQ8IVG5 1584 aa16.52■□□□□ 0.23
CTCFL-204ENST00000422869 CCDC141Q6ZP82 1450 aa16.52■□□□□ 0.23
CTCFL-204ENST00000422869 PPP2R1AP30153 589 aa16.51■□□□□ 0.23
CTCFL-204ENST00000422869 GOLGA2Q08379 1002 aa16.51■□□□□ 0.23
CTCFL-204ENST00000422869 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
CTCFL-204ENST00000422869 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
CTCFL-204ENST00000422869 CDC42BPBQ9Y5S2 1711 aa16.5■□□□□ 0.23
CTCFL-204ENST00000422869 NUP160Q12769 1436 aa16.49■□□□□ 0.23
CTCFL-204ENST00000422869 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
CTCFL-204ENST00000422869 EIF3AQ14152 1382 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms