RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 TNRQ92752 1358 aa17.84■□□□□ 0.45
NDUFA3-208ENST00000422029 APLP2Q06481 763 aa17.84■□□□□ 0.45
NDUFA3-208ENST00000422029 ARHGEF5Q12774 1597 aa17.83■□□□□ 0.45
NDUFA3-208ENST00000422029 PKD2Q13563 968 aa17.82■□□□□ 0.44
NDUFA3-208ENST00000422029 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
NDUFA3-208ENST00000422029 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
NDUFA3-208ENST00000422029 KDM5DQ9BY66 1539 aa17.81■□□□□ 0.44
NDUFA3-208ENST00000422029 A2ML1A8K2U0 1454 aa17.81■□□□□ 0.44
NDUFA3-208ENST00000422029 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
NDUFA3-208ENST00000422029 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
NDUFA3-208ENST00000422029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.79■□□□□ 0.442e-6■■■■□ 19.8
NDUFA3-208ENST00000422029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■■□□□ 11.7
NDUFA3-208ENST00000422029 CHIC2Q9UKJ5 165 aa17.79■□□□□ 0.44
NDUFA3-208ENST00000422029 PZPP20742 1482 aa17.78■□□□□ 0.44
NDUFA3-208ENST00000422029 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
NDUFA3-208ENST00000422029 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
NDUFA3-208ENST00000422029 TCOF1Q13428 1488 aaKnown RBP17.77■□□□□ 0.44
NDUFA3-208ENST00000422029 MIA2Q96PC5 1412 aa17.76■□□□□ 0.43
NDUFA3-208ENST00000422029 MAP3K1Q13233 1512 aa17.76■□□□□ 0.43
NDUFA3-208ENST00000422029 DISP3Q9P2K9 1392 aa17.76■□□□□ 0.43
NDUFA3-208ENST00000422029 CFAP65Q6ZU64 1925 aaKnown RBP17.75■□□□□ 0.43
NDUFA3-208ENST00000422029 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
NDUFA3-208ENST00000422029 ABCC5O15440 1437 aa17.73■□□□□ 0.43
NDUFA3-208ENST00000422029 ABCC3O15438 1527 aa17.73■□□□□ 0.43
NDUFA3-208ENST00000422029 ANKLE2Q86XL3 938 aa17.73■□□□□ 0.43
NDUFA3-208ENST00000422029 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
NDUFA3-208ENST00000422029 MAST1Q9Y2H9 1570 aa17.73■□□□□ 0.43
NDUFA3-208ENST00000422029 KIF15Q9NS87 1388 aa17.71■□□□□ 0.43
NDUFA3-208ENST00000422029 PIP4K2BP78356 416 aa17.71■□□□□ 0.43
NDUFA3-208ENST00000422029 ILDR2Q71H61 639 aa17.71■□□□□ 0.43
NDUFA3-208ENST00000422029 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
NDUFA3-208ENST00000422029 PTPN23Q9H3S7 1636 aa17.71■□□□□ 0.43
NDUFA3-208ENST00000422029 CEP152O94986 1710 aa17.7■□□□□ 0.42
NDUFA3-208ENST00000422029 RNF17Q9BXT8 1623 aaKnown RBP17.7■□□□□ 0.42
NDUFA3-208ENST00000422029 NEURL4Q96JN8 1562 aa17.7■□□□□ 0.42
NDUFA3-208ENST00000422029 UGGT1Q9NYU2 1555 aa17.7■□□□□ 0.42
NDUFA3-208ENST00000422029 FAM50AQ14320 339 aaKnown RBP17.69■□□□□ 0.42
NDUFA3-208ENST00000422029 MROH1Q8NDA8 1641 aa17.69■□□□□ 0.42
NDUFA3-208ENST00000422029 PPARGC1BQ86YN6 1023 aaKnown RBP17.68■□□□□ 0.42
NDUFA3-208ENST00000422029 DUOX2Q9NRD8 1548 aa17.67■□□□□ 0.42
NDUFA3-208ENST00000422029 DAPK1P53355 1430 aa17.67■□□□□ 0.42
NDUFA3-208ENST00000422029 FGD6Q6ZV73 1430 aa17.67■□□□□ 0.42
NDUFA3-208ENST00000422029 ERVK-7P63135 1459 aa17.67■□□□□ 0.42
NDUFA3-208ENST00000422029 POLR1AO95602 1720 aaPredicted RBP17.67■□□□□ 0.42
NDUFA3-208ENST00000422029 NLRP1Q9C000 1473 aa17.66■□□□□ 0.42
NDUFA3-208ENST00000422029 FAM135AQ9P2D6 1515 aa17.66■□□□□ 0.42
NDUFA3-208ENST00000422029 NPHP4O75161 1426 aaPredicted RBP17.65■□□□□ 0.42
NDUFA3-208ENST00000422029 IQSEC2Q5JU85 1478 aa17.64■□□□□ 0.41
NDUFA3-208ENST00000422029 SHANK2Q9UPX8 1470 aa17.64■□□□□ 0.41
NDUFA3-208ENST00000422029 EIF2AK4Q9P2K8 1649 aaKnown RBP17.64■□□□□ 0.41
NDUFA3-208ENST00000422029 CROCC2H7BZ55 1655 aa17.63■□□□□ 0.41
NDUFA3-208ENST00000422029 SPATA31D1Q6ZQQ2 1576 aa17.62■□□□□ 0.41
NDUFA3-208ENST00000422029 LTKP29376 864 aa17.62■□□□□ 0.41
NDUFA3-208ENST00000422029 ZC3H13Q5T200 1668 aaKnown RBP17.61■□□□□ 0.41
NDUFA3-208ENST00000422029 TXNDC2Q86VQ3 553 aa17.61■□□□□ 0.41
NDUFA3-208ENST00000422029 HSPA1LP34931 641 aa17.6■□□□□ 0.41
NDUFA3-208ENST00000422029 ANKRD30AQ9BXX3 1397 aa17.6■□□□□ 0.41
NDUFA3-208ENST00000422029 VWDEQ8N2E2 1590 aa17.6■□□□□ 0.41
NDUFA3-208ENST00000422029 ERBINQ96RT1 1412 aa17.59■□□□□ 0.41
NDUFA3-208ENST00000422029 STAG3Q9UJ98 1225 aa17.59■□□□□ 0.41
NDUFA3-208ENST00000422029 KANK1Q14678 1352 aa17.57■□□□□ 0.4
NDUFA3-208ENST00000422029 TOM1O60784 492 aa17.57■□□□□ 0.4
NDUFA3-208ENST00000422029 ITGAEP38570 1179 aa17.57■□□□□ 0.4
NDUFA3-208ENST00000422029 IQGAP1P46940 1657 aa17.57■□□□□ 0.4
NDUFA3-208ENST00000422029 UBR1Q8IWV7 1749 aa17.56■□□□□ 0.4
NDUFA3-208ENST00000422029 IDI1Q13907 227 aa17.56■□□□□ 0.4
NDUFA3-208ENST00000422029 PRDM15P57071 1507 aaPredicted RBP17.56■□□□□ 0.4
NDUFA3-208ENST00000422029 MED14O60244 1454 aa17.56■□□□□ 0.4
NDUFA3-208ENST00000422029 CPS1P31327 1500 aa17.55■□□□□ 0.4
NDUFA3-208ENST00000422029 STRCP1A6NGW2 1772 aa17.55■□□□□ 0.4
NDUFA3-208ENST00000422029 DEPDC5O75140 1603 aa17.54■□□□□ 0.4
NDUFA3-208ENST00000422029 SCAF11Q99590 1463 aaKnown RBP17.53■□□□□ 0.4
NDUFA3-208ENST00000422029 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
NDUFA3-208ENST00000422029 PIK3C2BO00750 1634 aa17.53■□□□□ 0.4
NDUFA3-208ENST00000422029 EID1Q9Y6B2 187 aa17.52■□□□□ 0.4
NDUFA3-208ENST00000422029 ARHGAP31Q2M1Z3 1444 aa17.52■□□□□ 0.4
NDUFA3-208ENST00000422029 BCANQ96GW7 911 aa17.51■□□□□ 0.39
NDUFA3-208ENST00000422029 SLC26A8Q96RN1 970 aa17.51■□□□□ 0.39
NDUFA3-208ENST00000422029 LRRC7Q96NW7 1537 aa17.5■□□□□ 0.39
NDUFA3-208ENST00000422029 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
NDUFA3-208ENST00000422029 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
NDUFA3-208ENST00000422029 CHGAP10645 457 aaKnown RBP17.47■□□□□ 0.39
NDUFA3-208ENST00000422029 ARHGAP23Q9P227 1491 aa17.47■□□□□ 0.39
NDUFA3-208ENST00000422029 SYNMO15061 1565 aa17.47■□□□□ 0.39
NDUFA3-208ENST00000422029 ANKRD50Q9ULJ7 1429 aa17.47■□□□□ 0.39
NDUFA3-208ENST00000422029 SOCS7O14512 581 aa17.46■□□□□ 0.39
NDUFA3-208ENST00000422029 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
NDUFA3-208ENST00000422029 SLIT1O75093 1534 aa17.46■□□□□ 0.39
NDUFA3-208ENST00000422029 ADGRL2O95490 1459 aa17.45■□□□□ 0.38
NDUFA3-208ENST00000422029 EFCAB6Q5THR3 1501 aa17.43■□□□□ 0.38
NDUFA3-208ENST00000422029 LMTK2Q8IWU2 1503 aa17.43■□□□□ 0.38
NDUFA3-208ENST00000422029 NOS1P29475 1434 aa17.42■□□□□ 0.38
NDUFA3-208ENST00000422029 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
NDUFA3-208ENST00000422029 PPP1R15AO75807 674 aaPredicted RBP17.39■□□□□ 0.37
NDUFA3-208ENST00000422029 MED1Q15648 1581 aaPredicted RBP17.38■□□□□ 0.37
NDUFA3-208ENST00000422029 SLC52A1Q9NWF4 448 aa17.38■□□□□ 0.37
NDUFA3-208ENST00000422029 TMEM94Q12767 1356 aa17.38■□□□□ 0.37
NDUFA3-208ENST00000422029 XIRP1Q702N8 1843 aaKnown RBP17.37■□□□□ 0.37
NDUFA3-208ENST00000422029 KCNA6P17658 529 aa17.37■□□□□ 0.37
NDUFA3-208ENST00000422029 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms