RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 A2ML1A8K2U0 1454 aa20.37■□□□□ 0.85
PRAME-207ENST00000420709 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
PRAME-207ENST00000420709 ZNF335Q9H4Z2 1342 aaPredicted RBP20.36■□□□□ 0.85
PRAME-207ENST00000420709 DNMT1P26358 1616 aaKnown RBP20.36■□□□□ 0.85
PRAME-207ENST00000420709 TSPY4P0CV99 314 aa20.36■□□□□ 0.85
PRAME-207ENST00000420709 TSPY10P0CW01 314 aa20.36■□□□□ 0.85
PRAME-207ENST00000420709 TNRQ92752 1358 aa20.34■□□□□ 0.85
PRAME-207ENST00000420709 WASHC2CQ9Y4E1 1318 aa20.34■□□□□ 0.85
PRAME-207ENST00000420709 PKD2Q13563 968 aa20.34■□□□□ 0.85
PRAME-207ENST00000420709 PZPP20742 1482 aa20.34■□□□□ 0.85
PRAME-207ENST00000420709 MAP3K1Q13233 1512 aa20.32■□□□□ 0.84
PRAME-207ENST00000420709 FAM135AQ9P2D6 1515 aa20.32■□□□□ 0.84
PRAME-207ENST00000420709 MAST1Q9Y2H9 1570 aa20.31■□□□□ 0.84
PRAME-207ENST00000420709 MYOM3Q5VTT5 1437 aa20.31■□□□□ 0.84
PRAME-207ENST00000420709 IQSEC2Q5JU85 1478 aa20.3■□□□□ 0.84
PRAME-207ENST00000420709 RNF17Q9BXT8 1623 aaKnown RBP20.28■□□□□ 0.84
PRAME-207ENST00000420709 MIA2Q96PC5 1412 aa20.27■□□□□ 0.84
PRAME-207ENST00000420709 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.84
PRAME-207ENST00000420709 NEURL4Q96JN8 1562 aa20.26■□□□□ 0.83
PRAME-207ENST00000420709 ABCC3O15438 1527 aa20.26■□□□□ 0.83
PRAME-207ENST00000420709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.24■□□□□ 0.833e-13■■■■■ 30.1
PRAME-207ENST00000420709 MROH1Q8NDA8 1641 aa20.24■□□□□ 0.83
PRAME-207ENST00000420709 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
PRAME-207ENST00000420709 DISP3Q9P2K9 1392 aa20.23■□□□□ 0.83
PRAME-207ENST00000420709 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
PRAME-207ENST00000420709 CEP152O94986 1710 aa20.22■□□□□ 0.83
PRAME-207ENST00000420709 UGGT1Q9NYU2 1555 aa20.22■□□□□ 0.83
PRAME-207ENST00000420709 UBAP1LF5GYI3 381 aa20.22■□□□□ 0.83
PRAME-207ENST00000420709 NLRP1Q9C000 1473 aa20.22■□□□□ 0.83
PRAME-207ENST00000420709 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
PRAME-207ENST00000420709 CROCC2H7BZ55 1655 aa20.2■□□□□ 0.82
PRAME-207ENST00000420709 APLP2Q06481 763 aa20.2■□□□□ 0.82
PRAME-207ENST00000420709 DUOX2Q9NRD8 1548 aa20.2■□□□□ 0.82
PRAME-207ENST00000420709 ANKLE2Q86XL3 938 aa20.19■□□□□ 0.82
PRAME-207ENST00000420709 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
PRAME-207ENST00000420709 ABCC5O15440 1437 aa20.19■□□□□ 0.82
PRAME-207ENST00000420709 ERVK-7P63135 1459 aa20.18■□□□□ 0.82
PRAME-207ENST00000420709 THEMISQ8N1K5 641 aaPredicted RBP20.18■□□□□ 0.82
PRAME-207ENST00000420709 KIF15Q9NS87 1388 aa20.18■□□□□ 0.82
PRAME-207ENST00000420709 CFAP65Q6ZU64 1925 aaKnown RBP20.17■□□□□ 0.82
PRAME-207ENST00000420709 RRP7BPQ9NSQ0 103 aa20.17■□□□□ 0.82
PRAME-207ENST00000420709 ILDR2Q71H61 639 aa20.16■□□□□ 0.82
PRAME-207ENST00000420709 SHANK2Q9UPX8 1470 aa20.15■□□□□ 0.82
PRAME-207ENST00000420709 NPHP4O75161 1426 aaPredicted RBP20.14■□□□□ 0.81
PRAME-207ENST00000420709 DAPK1P53355 1430 aa20.14■□□□□ 0.81
PRAME-207ENST00000420709 DEPDC5O75140 1603 aa20.13■□□□□ 0.81
PRAME-207ENST00000420709 VWDEQ8N2E2 1590 aa20.13■□□□□ 0.81
PRAME-207ENST00000420709 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
PRAME-207ENST00000420709 CPS1P31327 1500 aa20.12■□□□□ 0.81
PRAME-207ENST00000420709 IQGAP1P46940 1657 aa20.12■□□□□ 0.81
PRAME-207ENST00000420709 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
PRAME-207ENST00000420709 MED14O60244 1454 aa20.11■□□□□ 0.81
PRAME-207ENST00000420709 ERBINQ96RT1 1412 aa20.11■□□□□ 0.81
PRAME-207ENST00000420709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.815e-17■■□□□ 11.4
PRAME-207ENST00000420709 CHIC2Q9UKJ5 165 aa20.11■□□□□ 0.81
PRAME-207ENST00000420709 SCAF1Q9H7N4 1312 aaKnown RBP20.1■□□□□ 0.81
PRAME-207ENST00000420709 UBR1Q8IWV7 1749 aa20.1■□□□□ 0.81
PRAME-207ENST00000420709 PIP4K2BP78356 416 aa20.08■□□□□ 0.81
PRAME-207ENST00000420709 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
PRAME-207ENST00000420709 ARHGAP31Q2M1Z3 1444 aa20.04■□□□□ 0.8
PRAME-207ENST00000420709 ANKRD30AQ9BXX3 1397 aa20.04■□□□□ 0.8
PRAME-207ENST00000420709 TOM1O60784 492 aa20.03■□□□□ 0.8
PRAME-207ENST00000420709 KANK1Q14678 1352 aa20.03■□□□□ 0.8
PRAME-207ENST00000420709 HSPA1LP34931 641 aa20.02■□□□□ 0.8
PRAME-207ENST00000420709 SCAF11Q99590 1463 aaKnown RBP20.02■□□□□ 0.8
PRAME-207ENST00000420709 PIK3C2BO00750 1634 aa20.02■□□□□ 0.79
PRAME-207ENST00000420709 LTKP29376 864 aa20.01■□□□□ 0.79
PRAME-207ENST00000420709 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
PRAME-207ENST00000420709 ARHGAP23Q9P227 1491 aa19.99■□□□□ 0.79
PRAME-207ENST00000420709 ALKQ9UM73 1620 aa19.99■□□□□ 0.79
PRAME-207ENST00000420709 SLIT1O75093 1534 aa19.99■□□□□ 0.79
PRAME-207ENST00000420709 TXNDC2Q86VQ3 553 aa19.99■□□□□ 0.79
PRAME-207ENST00000420709 LRRC7Q96NW7 1537 aa19.98■□□□□ 0.79
PRAME-207ENST00000420709 LMTK2Q8IWU2 1503 aa19.97■□□□□ 0.79
PRAME-207ENST00000420709 SYNMO15061 1565 aa19.96■□□□□ 0.79
PRAME-207ENST00000420709 SOCS7O14512 581 aa19.96■□□□□ 0.79
PRAME-207ENST00000420709 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
PRAME-207ENST00000420709 ADGRL2O95490 1459 aa19.96■□□□□ 0.79
PRAME-207ENST00000420709 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
PRAME-207ENST00000420709 EFCAB6Q5THR3 1501 aa19.94■□□□□ 0.78
PRAME-207ENST00000420709 EID1Q9Y6B2 187 aa19.94■□□□□ 0.78
PRAME-207ENST00000420709 IDI1Q13907 227 aa19.93■□□□□ 0.78
PRAME-207ENST00000420709 TMEM2Q9UHN6 1383 aa19.93■□□□□ 0.78
PRAME-207ENST00000420709 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
PRAME-207ENST00000420709 NOS1P29475 1434 aa19.9■□□□□ 0.78
PRAME-207ENST00000420709 ANKRD50Q9ULJ7 1429 aa19.9■□□□□ 0.78
PRAME-207ENST00000420709 XIRP1Q702N8 1843 aaKnown RBP19.88■□□□□ 0.77
PRAME-207ENST00000420709 KDM5AP29375 1690 aaKnown RBP19.88■□□□□ 0.77
PRAME-207ENST00000420709 ADGRB3O60242 1522 aa19.88■□□□□ 0.77
PRAME-207ENST00000420709 SLC26A8Q96RN1 970 aa19.84■□□□□ 0.77
PRAME-207ENST00000420709 TET3O43151 1660 aa19.83■□□□□ 0.76
PRAME-207ENST00000420709 MYO5BQ9ULV0 1848 aa19.82■□□□□ 0.76
PRAME-207ENST00000420709 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
PRAME-207ENST00000420709 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
PRAME-207ENST00000420709 SLC52A1Q9NWF4 448 aa19.81■□□□□ 0.76
PRAME-207ENST00000420709 UNC13BO14795 1591 aa19.81■□□□□ 0.76
PRAME-207ENST00000420709 GCC2Q8IWJ2 1684 aa19.81■□□□□ 0.76
PRAME-207ENST00000420709 RBM33Q96EV2 1170 aaKnown RBP19.8■□□□□ 0.76
PRAME-207ENST00000420709 BCANQ96GW7 911 aa19.8■□□□□ 0.76
PRAME-207ENST00000420709 TMEM94Q12767 1356 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms