RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 SHANK2Q9UPX8 1470 aa18.75■□□□□ 0.59
CCT6P3-201ENST00000419314 TMF1P82094 1093 aa18.75■□□□□ 0.59
CCT6P3-201ENST00000419314 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
CCT6P3-201ENST00000419314 STAG3Q9UJ98 1225 aa18.74■□□□□ 0.59
CCT6P3-201ENST00000419314 TTC37Q6PGP7 1564 aa18.74■□□□□ 0.59
CCT6P3-201ENST00000419314 ASXL2Q76L83 1435 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 MLECQ14165 292 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 FANCAO15360 1455 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 TEX14Q8IWB6 1497 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
CCT6P3-201ENST00000419314 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.58
CCT6P3-201ENST00000419314 ADGRL1O94910 1474 aa18.7■□□□□ 0.58
CCT6P3-201ENST00000419314 WDR7Q9Y4E6 1490 aa18.7■□□□□ 0.58
CCT6P3-201ENST00000419314 FAM135AQ9P2D6 1515 aa18.7■□□□□ 0.58
CCT6P3-201ENST00000419314 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
CCT6P3-201ENST00000419314 CD109Q6YHK3 1445 aa18.68■□□□□ 0.58
CCT6P3-201ENST00000419314 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
CCT6P3-201ENST00000419314 ADGBQ8N7X0 1667 aa18.67■□□□□ 0.58
CCT6P3-201ENST00000419314 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
CCT6P3-201ENST00000419314 PANK3Q9H999 370 aa18.66■□□□□ 0.58
CCT6P3-201ENST00000419314 ARHGEF12Q9NZN5 1544 aa18.66■□□□□ 0.58
CCT6P3-201ENST00000419314 ESF1Q9H501 851 aaKnown RBP18.65■□□□□ 0.58
CCT6P3-201ENST00000419314 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.584e-6■□□□□ 10.9
CCT6P3-201ENST00000419314 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
CCT6P3-201ENST00000419314 ARHGEF5Q12774 1597 aa18.63■□□□□ 0.57
CCT6P3-201ENST00000419314 ZCCHC11Q5TAX3 1644 aaKnown RBP18.62■□□□□ 0.57
CCT6P3-201ENST00000419314 PREX2Q70Z35 1606 aa18.62■□□□□ 0.57
CCT6P3-201ENST00000419314 TRAK1Q9UPV9 953 aa18.61■□□□□ 0.57
CCT6P3-201ENST00000419314 CDC42BPBQ9Y5S2 1711 aa18.61■□□□□ 0.57
CCT6P3-201ENST00000419314 UHRF1BP1LA0JNW5 1464 aa18.6■□□□□ 0.57
CCT6P3-201ENST00000419314 DUOX2Q9NRD8 1548 aa18.6■□□□□ 0.57
CCT6P3-201ENST00000419314 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
CCT6P3-201ENST00000419314 CDCA8Q53HL2 280 aa18.6■□□□□ 0.57
CCT6P3-201ENST00000419314 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
CCT6P3-201ENST00000419314 STK26Q9P289 416 aa18.59■□□□□ 0.57
CCT6P3-201ENST00000419314 SHROOM2Q13796 1616 aa18.58■□□□□ 0.57
CCT6P3-201ENST00000419314 MYO5CQ9NQX4 1742 aa18.58■□□□□ 0.57
CCT6P3-201ENST00000419314 RALBP1Q15311 655 aa18.58■□□□□ 0.56
CCT6P3-201ENST00000419314 ARID4BQ4LE39 1312 aaPredicted RBP18.57■□□□□ 0.56
CCT6P3-201ENST00000419314 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
CCT6P3-201ENST00000419314 DHX29Q7Z478 1369 aaKnown RBP18.56■□□□□ 0.56
CCT6P3-201ENST00000419314 ERBINQ96RT1 1412 aa18.56■□□□□ 0.56
CCT6P3-201ENST00000419314 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
CCT6P3-201ENST00000419314 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
CCT6P3-201ENST00000419314 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
CCT6P3-201ENST00000419314 CROCC2H7BZ55 1655 aa18.53■□□□□ 0.56
CCT6P3-201ENST00000419314 RALGAPBQ86X10 1494 aa18.53■□□□□ 0.56
CCT6P3-201ENST00000419314 MYBBP1AQ9BQG0 1328 aaKnown RBP18.53■□□□□ 0.56
CCT6P3-201ENST00000419314 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
CCT6P3-201ENST00000419314 PRAG1Q86YV5 1406 aa18.52■□□□□ 0.56
CCT6P3-201ENST00000419314 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
CCT6P3-201ENST00000419314 PLA2R1Q13018 1463 aa18.5■□□□□ 0.55
CCT6P3-201ENST00000419314 A2MP01023 1474 aa18.49■□□□□ 0.55
CCT6P3-201ENST00000419314 ABCC1P33527 1531 aa18.49■□□□□ 0.55
CCT6P3-201ENST00000419314 UHRF1BP1Q6BDS2 1440 aa18.49■□□□□ 0.55
CCT6P3-201ENST00000419314 RTEL1-TNFRSF6BF6WH68 1400 aa18.48■□□□□ 0.55
CCT6P3-201ENST00000419314 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
CCT6P3-201ENST00000419314 DISP3Q9P2K9 1392 aa18.47■□□□□ 0.55
CCT6P3-201ENST00000419314 B4GALNT3Q6L9W6 998 aa18.47■□□□□ 0.55
CCT6P3-201ENST00000419314 PNISRQ8TF01 805 aaKnown RBP18.46■□□□□ 0.55
CCT6P3-201ENST00000419314 POGKQ9P215 609 aa18.46■□□□□ 0.55
CCT6P3-201ENST00000419314 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
CCT6P3-201ENST00000419314 TESK2Q96S53 571 aa18.45■□□□□ 0.54
CCT6P3-201ENST00000419314 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
CCT6P3-201ENST00000419314 STAC3Q96MF2 364 aa18.43■□□□□ 0.54
CCT6P3-201ENST00000419314 ZNF518AQ6AHZ1 1483 aa18.43■□□□□ 0.54
CCT6P3-201ENST00000419314 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
CCT6P3-201ENST00000419314 KDM5DQ9BY66 1539 aa18.42■□□□□ 0.54
CCT6P3-201ENST00000419314 VGFO15240 615 aaPredicted RBP18.41■□□□□ 0.54
CCT6P3-201ENST00000419314 CCDC136Q96JN2 1154 aa18.4■□□□□ 0.54
CCT6P3-201ENST00000419314 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
CCT6P3-201ENST00000419314 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
CCT6P3-201ENST00000419314 CFAP65Q6ZU64 1925 aaKnown RBP18.39■□□□□ 0.54
CCT6P3-201ENST00000419314 NEUROD2Q15784 382 aa18.39■□□□□ 0.54
CCT6P3-201ENST00000419314 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.54
CCT6P3-201ENST00000419314 CENPJQ9HC77 1338 aaPredicted RBP18.39■□□□□ 0.53
CCT6P3-201ENST00000419314 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
CCT6P3-201ENST00000419314 IDI1Q13907 227 aa18.38■□□□□ 0.53
CCT6P3-201ENST00000419314 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
CCT6P3-201ENST00000419314 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
CCT6P3-201ENST00000419314 MORC1Q86VD1 984 aa18.37■□□□□ 0.53
CCT6P3-201ENST00000419314 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
CCT6P3-201ENST00000419314 ZFYVE16Q7Z3T8 1539 aa18.35■□□□□ 0.53
CCT6P3-201ENST00000419314 BRD4O60885 1362 aaPredicted RBP18.35■□□□□ 0.53
CCT6P3-201ENST00000419314 NOS1P29475 1434 aa18.35■□□□□ 0.53
CCT6P3-201ENST00000419314 SLC12A5Q9H2X9 1139 aa18.35■□□□□ 0.53
CCT6P3-201ENST00000419314 ATP10AO60312 1499 aa18.34■□□□□ 0.53
CCT6P3-201ENST00000419314 PLXNC1O60486 1568 aa18.34■□□□□ 0.53
CCT6P3-201ENST00000419314 TSHZ2Q9NRE2 1034 aa18.34■□□□□ 0.53
CCT6P3-201ENST00000419314 MINK1Q8N4C8 1332 aaPredicted RBP18.34■□□□□ 0.53
CCT6P3-201ENST00000419314 KDM5CP41229 1560 aa18.33■□□□□ 0.52
CCT6P3-201ENST00000419314 PER1O15534 1290 aaPredicted RBP18.32■□□□□ 0.52
CCT6P3-201ENST00000419314 ADAMTS8Q9UP79 889 aa18.32■□□□□ 0.52
CCT6P3-201ENST00000419314 CABP2Q9NPB3 220 aa18.32■□□□□ 0.52
CCT6P3-201ENST00000419314 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
CCT6P3-201ENST00000419314 BCORL1Q5H9F3 1711 aa18.31■□□□□ 0.52
CCT6P3-201ENST00000419314 POGZQ7Z3K3 1410 aa18.31■□□□□ 0.52
CCT6P3-201ENST00000419314 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
CCT6P3-201ENST00000419314 CDCA7LQ96GN5 454 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms