RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 PLEKHH2Q8IVE3 1493 aa12.47□□□□□ -0.41
LINC00963-202ENST00000419300 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
LINC00963-202ENST00000419300 PDS5BQ9NTI5 1447 aa12.46□□□□□ -0.41
LINC00963-202ENST00000419300 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.42
LINC00963-202ENST00000419300 TEX35Q5T0J7 233 aa12.46□□□□□ -0.42
LINC00963-202ENST00000419300 MIA2Q96PC5 1412 aa12.46□□□□□ -0.42
LINC00963-202ENST00000419300 MPHOSPH9Q99550 1183 aa12.45□□□□□ -0.42
LINC00963-202ENST00000419300 RSPH4AQ5TD94 716 aa12.45□□□□□ -0.42
LINC00963-202ENST00000419300 SPRYD3Q8NCJ5 442 aa12.45□□□□□ -0.42
LINC00963-202ENST00000419300 NUP155O75694 1391 aa12.45□□□□□ -0.42
LINC00963-202ENST00000419300 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
LINC00963-202ENST00000419300 HDGFL2Q7Z4V5 671 aaPredicted RBP12.44□□□□□ -0.42
LINC00963-202ENST00000419300 RTF1Q92541 710 aaKnown RBP12.44□□□□□ -0.42
LINC00963-202ENST00000419300 A0A0U1RQG5 324 aaPredicted RBP12.44□□□□□ -0.42
LINC00963-202ENST00000419300 CCDC70Q6NSX1 233 aa12.43□□□□□ -0.42
LINC00963-202ENST00000419300 C14orf37Q86TY3 774 aa12.43□□□□□ -0.42
LINC00963-202ENST00000419300 PDE4AP27815 886 aa12.43□□□□□ -0.42
LINC00963-202ENST00000419300 E9PSI1 815 aa12.43□□□□□ -0.42
LINC00963-202ENST00000419300 MFAP1P55081 439 aaKnown RBP12.43□□□□□ -0.42
LINC00963-202ENST00000419300 NOM1Q5C9Z4 860 aaKnown RBP12.42□□□□□ -0.42
LINC00963-202ENST00000419300 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-202ENST00000419300 LRRC9Q6ZRR7 1453 aa12.42□□□□□ -0.42
LINC00963-202ENST00000419300 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
LINC00963-202ENST00000419300 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
LINC00963-202ENST00000419300 TPM2P07951 284 aa12.41□□□□□ -0.42
LINC00963-202ENST00000419300 MYOM3Q5VTT5 1437 aa12.41□□□□□ -0.42
LINC00963-202ENST00000419300 REC8O95072 547 aa12.41□□□□□ -0.42
LINC00963-202ENST00000419300 PKD2Q13563 968 aa12.41□□□□□ -0.42
LINC00963-202ENST00000419300 CC2D2AQ9P2K1 1620 aa12.41□□□□□ -0.42
LINC00963-202ENST00000419300 SMC4Q9NTJ3 1288 aa12.41□□□□□ -0.42
LINC00963-202ENST00000419300 CALRP27797 417 aaKnown RBP12.4□□□□□ -0.42
LINC00963-202ENST00000419300 TPM3P06753 285 aa12.4□□□□□ -0.42
LINC00963-202ENST00000419300 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
LINC00963-202ENST00000419300 FGD6Q6ZV73 1430 aa12.39□□□□□ -0.43
LINC00963-202ENST00000419300 BRD4O60885 1362 aaPredicted RBP12.39□□□□□ -0.43
LINC00963-202ENST00000419300 RRBP1Q9P2E9 1410 aaKnown RBP12.38□□□□□ -0.43
LINC00963-202ENST00000419300 SYNJ1O43426 1573 aa12.38□□□□□ -0.43
LINC00963-202ENST00000419300 FHOD3Q2V2M9 1422 aa12.38□□□□□ -0.43
LINC00963-202ENST00000419300 PTPN23Q9H3S7 1636 aa12.38□□□□□ -0.43
LINC00963-202ENST00000419300 SRPK2P78362 688 aaKnown RBP12.37□□□□□ -0.43
LINC00963-202ENST00000419300 STK31Q9BXU1 1019 aa12.37□□□□□ -0.43
LINC00963-202ENST00000419300 TPM1P09493 284 aa12.37□□□□□ -0.43
LINC00963-202ENST00000419300 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
LINC00963-202ENST00000419300 FAM43AQ8N2R8 423 aa12.37□□□□□ -0.43
LINC00963-202ENST00000419300 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
LINC00963-202ENST00000419300 KANK4Q5T7N3 995 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-202ENST00000419300 TAF3Q5VWG9 929 aa12.36□□□□□ -0.43
LINC00963-202ENST00000419300 CWC15Q9P013 229 aaKnown RBP12.36□□□□□ -0.43
LINC00963-202ENST00000419300 CASKIN1Q8WXD9 1431 aa12.36□□□□□ -0.43
LINC00963-202ENST00000419300 CCDC39Q9UFE4 941 aa12.36□□□□□ -0.43
LINC00963-202ENST00000419300 PRKRIP1Q9H875 184 aaPredicted RBP12.35□□□□□ -0.43
LINC00963-202ENST00000419300 U2AF1L5P0DN76 240 aaPredicted RBP12.34□□□□□ -0.43
LINC00963-202ENST00000419300 U2AF1Q01081 240 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00963-202ENST00000419300 BIVM-ERCC5R4GMW8 1640 aa12.34□□□□□ -0.43
LINC00963-202ENST00000419300 ADGBQ8N7X0 1667 aa12.34□□□□□ -0.43
LINC00963-202ENST00000419300 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
LINC00963-202ENST00000419300 HOOK1Q9UJC3 728 aaKnown RBP12.34□□□□□ -0.43
LINC00963-202ENST00000419300 NUCB2P80303 420 aa12.34□□□□□ -0.43
LINC00963-202ENST00000419300 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
LINC00963-202ENST00000419300 ARGLU1Q9NWB6 273 aaPredicted RBP12.34□□□□□ -0.43
LINC00963-202ENST00000419300 DDX19BQ9UMR2 479 aa12.34□□□□□ -0.43
LINC00963-202ENST00000419300 DDX49Q9Y6V7 483 aaKnown RBP12.34□□□□□ -0.43
LINC00963-202ENST00000419300 MRE11P49959 708 aa12.34□□□□□ -0.43
LINC00963-202ENST00000419300 HSP90B1P14625 803 aaKnown RBP12.33□□□□□ -0.44
LINC00963-202ENST00000419300 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
LINC00963-202ENST00000419300 LETM1O95202 739 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-202ENST00000419300 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
LINC00963-202ENST00000419300 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.44
LINC00963-202ENST00000419300 WDR97A6NE52 1622 aa12.33□□□□□ -0.44
LINC00963-202ENST00000419300 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
LINC00963-202ENST00000419300 ACBD3Q9H3P7 528 aa12.33□□□□□ -0.44
LINC00963-202ENST00000419300 CCDC66A2RUB6 948 aa12.33□□□□□ -0.44
LINC00963-202ENST00000419300 HMGN5P82970 282 aaKnown RBP12.33□□□□□ -0.44
LINC00963-202ENST00000419300 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
LINC00963-202ENST00000419300 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
LINC00963-202ENST00000419300 DIAPH3Q9NSV4 1193 aa12.32□□□□□ -0.44
LINC00963-202ENST00000419300 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
LINC00963-202ENST00000419300 ZKSCAN2Q63HK3 967 aa12.31□□□□□ -0.44
LINC00963-202ENST00000419300 CCP110O43303 1012 aa12.31□□□□□ -0.44
LINC00963-202ENST00000419300 MAP3K1Q13233 1512 aa12.31□□□□□ -0.44
LINC00963-202ENST00000419300 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
LINC00963-202ENST00000419300 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-202ENST00000419300 L3MBTL2Q969R5 705 aa12.3□□□□□ -0.44
LINC00963-202ENST00000419300 NAT10Q9H0A0 1025 aaKnown RBP12.3□□□□□ -0.44
LINC00963-202ENST00000419300 EIF2AK4Q9P2K8 1649 aaKnown RBP12.3□□□□□ -0.44
LINC00963-202ENST00000419300 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-202ENST00000419300 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
LINC00963-202ENST00000419300 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
LINC00963-202ENST00000419300 SMG6Q86US8 1419 aaKnown RBP12.29□□□□□ -0.44
LINC00963-202ENST00000419300 RRP9O43818 475 aaKnown RBP12.29□□□□□ -0.44
LINC00963-202ENST00000419300 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
LINC00963-202ENST00000419300 THOC2Q8NI27 1593 aaKnown RBP12.28□□□□□ -0.44
LINC00963-202ENST00000419300 H3BQV1 296 aa12.28□□□□□ -0.44
LINC00963-202ENST00000419300 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
LINC00963-202ENST00000419300 ARID3AQ99856 593 aa12.28□□□□□ -0.44
LINC00963-202ENST00000419300 POLR1AO95602 1720 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-202ENST00000419300 KIF14Q15058 1648 aa12.28□□□□□ -0.44
LINC00963-202ENST00000419300 CCDC173Q0VFZ6 552 aa12.28□□□□□ -0.44
LINC00963-202ENST00000419300 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
LINC00963-202ENST00000419300 PCF11O94913 1555 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms