RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, human

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-208	ENST00000419205	ASXL2	Q76L83	1435 aa		28.86	■■■□□ 2.21
FAM3A-208	ENST00000419205	INO80	Q9ULG1	1556 aa	Predicted RBP	28.85	■■■□□ 2.21
FAM3A-208	ENST00000419205	KIF7	Q2M1P5	1343 aa		28.85	■■■□□ 2.21
FAM3A-208	ENST00000419205	SPAG9	O60271	1321 aa	Known RBP	28.84	■■■□□ 2.21
FAM3A-208	ENST00000419205	BCORL1	Q5H9F3	1711 aa		28.83	■■■□□ 2.21
FAM3A-208	ENST00000419205	ZNF326	Q5BKZ1	582 aa	Known RBP	28.82	■■■□□ 2.2
FAM3A-208	ENST00000419205	DNAJC5	Q9H3Z4	198 aa		28.82	■■■□□ 2.2
FAM3A-208	ENST00000419205	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.81	■■■□□ 2.2
FAM3A-208	ENST00000419205	DEPDC5	O75140	1603 aa		28.81	■■■□□ 2.2
FAM3A-208	ENST00000419205	ATP7A	Q04656	1500 aa		28.8	■■■□□ 2.2
FAM3A-208	ENST00000419205	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.79	■■■□□ 2.2
FAM3A-208	ENST00000419205	TRPM1	Q7Z4N2	1603 aa		28.78	■■■□□ 2.2
FAM3A-208	ENST00000419205	DCAF11	Q8TEB1	546 aa		28.77	■■■□□ 2.2
FAM3A-208	ENST00000419205	AFAP1	Q8N556	730 aa		28.76	■■■□□ 2.19
FAM3A-208	ENST00000419205	ADGRL1	O94910	1474 aa		28.76	■■■□□ 2.19
FAM3A-208	ENST00000419205	PRAG1	Q86YV5	1406 aa		28.74	■■■□□ 2.19
FAM3A-208	ENST00000419205	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.73	■■■□□ 2.19
FAM3A-208	ENST00000419205	A2M	P01023	1474 aa		28.73	■■■□□ 2.19
FAM3A-208	ENST00000419205		E9PCH4	1651 aa		28.73	■■■□□ 2.19
FAM3A-208	ENST00000419205	CARD11	Q9BXL7	1154 aa		28.72	■■■□□ 2.19
FAM3A-208	ENST00000419205	KDM2A	Q9Y2K7	1162 aa		28.72	■■■□□ 2.19
FAM3A-208	ENST00000419205	LAMC1	P11047	1609 aa		28.71	■■■□□ 2.19
FAM3A-208	ENST00000419205	SCAPER	Q9BY12	1400 aa		28.71	■■■□□ 2.19
FAM3A-208	ENST00000419205	VWDE	Q8N2E2	1590 aa		28.69	■■■□□ 2.18
FAM3A-208	ENST00000419205	CFAP74	Q9C0B2	1584 aa		28.69	■■■□□ 2.18
FAM3A-208	ENST00000419205	TET3	O43151	1660 aa		28.68	■■■□□ 2.18
FAM3A-208	ENST00000419205	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.68	■■■□□ 2.18
FAM3A-208	ENST00000419205	NPM1	P06748	294 aa	Known RBP eCLIP	28.67	■■■□□ 2.18
FAM3A-208	ENST00000419205	ROCK2	O75116	1388 aa	Known RBP	28.65	■■■□□ 2.18
FAM3A-208	ENST00000419205	TRPM2	O94759	1503 aa		28.65	■■■□□ 2.18
FAM3A-208	ENST00000419205	SPHKAP	Q2M3C7	1700 aa		28.65	■■■□□ 2.18
FAM3A-208	ENST00000419205	GPRASP1	Q5JY77	1395 aa		28.64	■■■□□ 2.18
FAM3A-208	ENST00000419205	KIDINS220	Q9ULH0	1771 aa		28.63	■■■□□ 2.17
FAM3A-208	ENST00000419205	PRDM15	P57071	1507 aa	Predicted RBP	28.62	■■■□□ 2.17
FAM3A-208	ENST00000419205	CEP152	O94986	1710 aa		28.62	■■■□□ 2.17
FAM3A-208	ENST00000419205	DHX29	Q7Z478	1369 aa	Known RBP	28.61	■■■□□ 2.17
FAM3A-208	ENST00000419205	PTPRT	O14522	1441 aa		28.61	■■■□□ 2.17
FAM3A-208	ENST00000419205	ZNF518A	Q6AHZ1	1483 aa		28.61	■■■□□ 2.17
FAM3A-208	ENST00000419205	MROH1	Q8NDA8	1641 aa		28.59	■■■□□ 2.17
FAM3A-208	ENST00000419205	RGL3	Q3MIN7	710 aa		28.59	■■■□□ 2.17
FAM3A-208	ENST00000419205	KANK1	Q14678	1352 aa		28.59	■■■□□ 2.17
FAM3A-208	ENST00000419205	SUPT16H	Q9Y5B9	1047 aa	Known RBP	28.57	■■■□□ 2.16
FAM3A-208	ENST00000419205	ST20-MTHFS	A0A0A6YYL1	179 aa		28.57	■■■□□ 2.16
FAM3A-208	ENST00000419205	CD109	Q6YHK3	1445 aa		28.56	■■■□□ 2.16
FAM3A-208	ENST00000419205	RNF17	Q9BXT8	1623 aa	Known RBP	28.56	■■■□□ 2.16
FAM3A-208	ENST00000419205	CLTCL1	P53675	1640 aa		28.53	■■■□□ 2.16
FAM3A-208	ENST00000419205	NEURL4	Q96JN8	1562 aa		28.52	■■■□□ 2.16
FAM3A-208	ENST00000419205	POGZ	Q7Z3K3	1410 aa		28.51	■■■□□ 2.15
FAM3A-208	ENST00000419205	MADD	Q8WXG6	1647 aa		28.5	■■■□□ 2.15
FAM3A-208	ENST00000419205	CCDC184	Q52MB2	194 aa		28.5	■■■□□ 2.15
FAM3A-208	ENST00000419205	KIF3B	O15066	747 aa		28.49	■■■□□ 2.15
FAM3A-208	ENST00000419205	MLH3	Q9UHC1	1453 aa		28.48	■■■□□ 2.15
FAM3A-208	ENST00000419205	NBPF1	Q3BBV0	1214 aa		28.47	■■■□□ 2.15
FAM3A-208	ENST00000419205	STAC3	Q96MF2	364 aa		28.47	■■■□□ 2.15
FAM3A-208	ENST00000419205	MYT1L	Q9UL68	1186 aa		28.47	■■■□□ 2.15
FAM3A-208	ENST00000419205	LMTK2	Q8IWU2	1503 aa		28.47	■■■□□ 2.15
FAM3A-208	ENST00000419205	EFCAB6	Q5THR3	1501 aa		28.46	■■■□□ 2.15
FAM3A-208	ENST00000419205	HNRNPU	Q00839	825 aa	Known RBP eCLIP	28.46	■■■□□ 2.15
FAM3A-208	ENST00000419205	POLR3GL	Q9BT43	218 aa		28.46	■■■□□ 2.15
FAM3A-208	ENST00000419205	MRS2	Q9HD23	443 aa		28.46	■■■□□ 2.15
FAM3A-208	ENST00000419205	HECW2	Q9P2P5	1572 aa		28.46	■■■□□ 2.15
FAM3A-208	ENST00000419205	PELP1	Q8IZL8	1130 aa	Known RBP	28.45	■■■□□ 2.14
FAM3A-208	ENST00000419205	NEO1	Q92859	1461 aa		28.44	■■■□□ 2.14
FAM3A-208	ENST00000419205	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.42	■■■□□ 2.14
FAM3A-208	ENST00000419205	PPRC1	Q5VV67	1664 aa	Known RBP	28.4	■■■□□ 2.14
FAM3A-208	ENST00000419205	FRMPD1	Q5SYB0	1578 aa		28.4	■■■□□ 2.14
FAM3A-208	ENST00000419205	IQGAP1	P46940	1657 aa		28.39	■■■□□ 2.14
FAM3A-208	ENST00000419205	KTN1	Q86UP2	1357 aa	Known RBP	28.38	■■■□□ 2.13
FAM3A-208	ENST00000419205	KIAA1210	Q9ULL0	1709 aa		28.37	■■■□□ 2.13
FAM3A-208	ENST00000419205	KIF1B	O60333	1816 aa		28.36	■■■□□ 2.13
FAM3A-208	ENST00000419205	ABCA6	Q8N139	1617 aa		28.36	■■■□□ 2.13
FAM3A-208	ENST00000419205	TESK2	Q96S53	571 aa		28.35	■■■□□ 2.13
FAM3A-208	ENST00000419205	MAP3K4	Q9Y6R4	1608 aa		28.35	■■■□□ 2.13
FAM3A-208	ENST00000419205	FAM9B	Q8IZU0	186 aa		28.32	■■■□□ 2.12
FAM3A-208	ENST00000419205	IFT172	Q9UG01	1749 aa		28.31	■■■□□ 2.12
FAM3A-208	ENST00000419205	MYOM2	P54296	1465 aa		28.31	■■■□□ 2.12
FAM3A-208	ENST00000419205	GLI2	P10070	1586 aa		28.3	■■■□□ 2.12
FAM3A-208	ENST00000419205	NEFL	P07196	543 aa		28.29	■■■□□ 2.12
FAM3A-208	ENST00000419205	ZBED9	Q6R2W3	1325 aa		28.28	■■■□□ 2.12
FAM3A-208	ENST00000419205	DISP3	Q9P2K9	1392 aa		28.28	■■■□□ 2.12
FAM3A-208	ENST00000419205	UGGT1	Q9NYU2	1555 aa		28.28	■■■□□ 2.12
FAM3A-208	ENST00000419205	RICTOR	Q6R327	1708 aa		28.28	■■■□□ 2.12
FAM3A-208	ENST00000419205	RIMBP3C	A6NJZ7	1639 aa		28.28	■■■□□ 2.12
FAM3A-208	ENST00000419205	RIMBP3B	A6NNM3	1639 aa		28.28	■■■□□ 2.12
FAM3A-208	ENST00000419205	RIMBP3	Q9UFD9	1639 aa		28.28	■■■□□ 2.12
FAM3A-208	ENST00000419205	FKBP8	Q14318	412 aa		28.27	■■■□□ 2.12
FAM3A-208	ENST00000419205	RALBP1	Q15311	655 aa		28.27	■■■□□ 2.12
FAM3A-208	ENST00000419205	SCAF11	Q99590	1463 aa	Known RBP	28.26	■■■□□ 2.11
FAM3A-208	ENST00000419205	MROH2A	A6NES4	1674 aa		28.25	■■■□□ 2.11
FAM3A-208	ENST00000419205	TMF1	P82094	1093 aa		28.25	■■■□□ 2.11
FAM3A-208	ENST00000419205	DIP2C	Q9Y2E4	1556 aa		28.24	■■■□□ 2.11
FAM3A-208	ENST00000419205	ADGRB3	O60242	1522 aa		28.22	■■■□□ 2.11
FAM3A-208	ENST00000419205	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.21	■■■□□ 2.11
FAM3A-208	ENST00000419205	BRD4	O60885	1362 aa	Predicted RBP	28.21	■■■□□ 2.11
FAM3A-208	ENST00000419205	ABCC3	O15438	1527 aa		28.21	■■■□□ 2.11
FAM3A-208	ENST00000419205	NPAT	Q14207	1427 aa		28.2	■■■□□ 2.11
FAM3A-208	ENST00000419205	WASHC2C	Q9Y4E1	1318 aa		28.2	■■■□□ 2.11
FAM3A-208	ENST00000419205	PARD3	Q8TEW0	1356 aa		28.19	■■■□□ 2.1
FAM3A-208	ENST00000419205	NRXN1	Q9ULB1	1477 aa		28.19	■■■□□ 2.1
FAM3A-208	ENST00000419205	PER1	O15534	1290 aa	Predicted RBP	28.19	■■■□□ 2.1

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