RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 MAMSTRQ6ZN01 415 aa10.5□□□□□ -0.73
RFC4-204ENST00000417876 SLAIN1Q8ND83 568 aa10.5□□□□□ -0.73
RFC4-204ENST00000417876 FAM117AQ9C073 453 aa10.5□□□□□ -0.73
RFC4-204ENST00000417876 MAP3K7O43318 606 aa10.49□□□□□ -0.73
RFC4-204ENST00000417876 PARP9Q8IXQ6 854 aa10.49□□□□□ -0.73
RFC4-204ENST00000417876 TYW1BQ6NUM6 668 aa10.48□□□□□ -0.73
RFC4-204ENST00000417876 FOSBP53539 338 aa10.47□□□□□ -0.73
RFC4-204ENST00000417876 ARSIQ5FYB1 569 aa10.47□□□□□ -0.73
RFC4-204ENST00000417876 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
RFC4-204ENST00000417876 NUDT7P0C024 238 aa10.46□□□□□ -0.73
RFC4-204ENST00000417876 JPH4Q96JJ6 628 aa10.46□□□□□ -0.73
RFC4-204ENST00000417876 REPIN1Q9BWE0 567 aaKnown RBP10.46□□□□□ -0.73
RFC4-204ENST00000417876 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
RFC4-204ENST00000417876 GPR153Q6NV75 609 aa10.45□□□□□ -0.74
RFC4-204ENST00000417876 PHOX2BQ99453 314 aa10.44□□□□□ -0.74
RFC4-204ENST00000417876 C6orf132Q5T0Z8 1188 aa10.42□□□□□ -0.74
RFC4-204ENST00000417876 FBXW7Q969H0 707 aa10.42□□□□□ -0.74
RFC4-204ENST00000417876 DOK7Q18PE1 504 aa10.41□□□□□ -0.74
RFC4-204ENST00000417876 FAM161AQ3B820 660 aa10.41□□□□□ -0.74
RFC4-204ENST00000417876 C14orf37Q86TY3 774 aa10.41□□□□□ -0.74
RFC4-204ENST00000417876 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
RFC4-204ENST00000417876 PCDH10Q9P2E7 1040 aa10.41□□□□□ -0.74
RFC4-204ENST00000417876 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
RFC4-204ENST00000417876 TMUB1Q9BVT8 246 aa10.4□□□□□ -0.74
RFC4-204ENST00000417876 ADAM33Q9BZ11 813 aa10.4□□□□□ -0.74
RFC4-204ENST00000417876 MS4A1P11836 297 aa10.39□□□□□ -0.75
RFC4-204ENST00000417876 TTLL12Q14166 644 aaPredicted RBP10.39□□□□□ -0.75
RFC4-204ENST00000417876 GIGYF2Q6Y7W6 1299 aaKnown RBP10.38□□□□□ -0.75
RFC4-204ENST00000417876 ERICH6Q7L0X2 663 aa10.38□□□□□ -0.75
RFC4-204ENST00000417876 PADI6Q6TGC4 694 aa10.37□□□□□ -0.75
RFC4-204ENST00000417876 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
RFC4-204ENST00000417876 DAXXQ9UER7 740 aaPredicted RBP10.37□□□□□ -0.75
RFC4-204ENST00000417876 TTC13Q8NBP0 860 aa10.36□□□□□ -0.75
RFC4-204ENST00000417876 DDRGK1Q96HY6 314 aa10.36□□□□□ -0.75
RFC4-204ENST00000417876 LHX6Q9UPM6 363 aa10.36□□□□□ -0.75
RFC4-204ENST00000417876 NLRP7Q8WX94 980 aa10.35□□□□□ -0.75
RFC4-204ENST00000417876 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
RFC4-204ENST00000417876 RIMBP2O15034 1052 aa10.33□□□□□ -0.76
RFC4-204ENST00000417876 METTL3Q86U44 580 aaKnown RBP10.33□□□□□ -0.76
RFC4-204ENST00000417876 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
RFC4-204ENST00000417876 ZNF710Q8N1W2 664 aa10.32□□□□□ -0.76
RFC4-204ENST00000417876 CERKQ8TCT0 537 aa10.32□□□□□ -0.76
RFC4-204ENST00000417876 FAM198AQ9UFP1 575 aa10.32□□□□□ -0.76
RFC4-204ENST00000417876 COL9A1P20849 921 aa10.31□□□□□ -0.76
RFC4-204ENST00000417876 PXYLP1Q8TE99 480 aa10.31□□□□□ -0.76
RFC4-204ENST00000417876 CLCN1P35523 988 aa10.3□□□□□ -0.76
RFC4-204ENST00000417876 PRSS12P56730 875 aa10.3□□□□□ -0.76
RFC4-204ENST00000417876 GPCPD1Q9NPB8 672 aa10.3□□□□□ -0.76
RFC4-204ENST00000417876 SSTR3P32745 418 aaPredicted RBP10.29□□□□□ -0.76
RFC4-204ENST00000417876 CDAN1Q8IWY9 1227 aa10.29□□□□□ -0.76
RFC4-204ENST00000417876 CDCA7LQ96GN5 454 aa10.29□□□□□ -0.76
RFC4-204ENST00000417876 OATP04181 439 aa10.28□□□□□ -0.76
RFC4-204ENST00000417876 RBM27Q9P2N5 1060 aaKnown RBP10.28□□□□□ -0.76
RFC4-204ENST00000417876 C3orf80F5H4A9 247 aa10.27□□□□□ -0.77
RFC4-204ENST00000417876 BCL2L12Q9HB09 334 aa10.27□□□□□ -0.77
RFC4-204ENST00000417876 ST18O60284 1047 aa10.26□□□□□ -0.77
RFC4-204ENST00000417876 HOXB1P14653 301 aaPredicted RBP10.26□□□□□ -0.77
RFC4-204ENST00000417876 FAM217BQ9NTX9 383 aaPredicted RBP10.26□□□□□ -0.77
RFC4-204ENST00000417876 PPP4R3BQ5MIZ7 849 aa10.25□□□□□ -0.77
RFC4-204ENST00000417876 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
RFC4-204ENST00000417876 TSKSQ9UJT2 592 aa10.25□□□□□ -0.77
RFC4-204ENST00000417876 EYA1Q99502 592 aa10.23□□□□□ -0.77
RFC4-204ENST00000417876 BEGAINQ9BUH8 593 aa10.23□□□□□ -0.77
RFC4-204ENST00000417876 PSDA5PKW4 1024 aaPredicted RBP10.2□□□□□ -0.78
RFC4-204ENST00000417876 PPP1R3GB7ZBB8 358 aa10.2□□□□□ -0.78
RFC4-204ENST00000417876 SUPT5HO00267 1087 aaKnown RBP10.2□□□□□ -0.78
RFC4-204ENST00000417876 SNPHO15079 494 aa10.2□□□□□ -0.78
RFC4-204ENST00000417876 PTPREP23469 700 aa10.2□□□□□ -0.78
RFC4-204ENST00000417876 SH3D19Q5HYK7 790 aa10.2□□□□□ -0.78
RFC4-204ENST00000417876 RBM46Q8TBY0 533 aaKnown RBP10.2□□□□□ -0.78
RFC4-204ENST00000417876 RCCD1A6NED2 376 aa10.18□□□□□ -0.78
RFC4-204ENST00000417876 NUDT18Q6ZVK8 323 aa10.18□□□□□ -0.78
RFC4-204ENST00000417876 PROX2Q3B8N5 592 aa10.17□□□□□ -0.78
RFC4-204ENST00000417876 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
RFC4-204ENST00000417876 PCMTD1Q96MG8 357 aaPredicted RBP10.17□□□□□ -0.78
RFC4-204ENST00000417876 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
RFC4-204ENST00000417876 ONECUT3O60422 494 aaPredicted RBP10.16□□□□□ -0.78
RFC4-204ENST00000417876 SKIV2LQ15477 1246 aaKnown RBP10.16□□□□□ -0.78
RFC4-204ENST00000417876 ZMYND15Q9H091 742 aa10.16□□□□□ -0.78
RFC4-204ENST00000417876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.15□□□□□ -0.78
RFC4-204ENST00000417876 TATDN2Q93075 761 aa10.15□□□□□ -0.78
RFC4-204ENST00000417876 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
RFC4-204ENST00000417876 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
RFC4-204ENST00000417876 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
RFC4-204ENST00000417876 KCNK17Q96T54 332 aa10.14□□□□□ -0.79
RFC4-204ENST00000417876 PNMA3Q9UL41 463 aa10.14□□□□□ -0.79
RFC4-204ENST00000417876 SMAPO00193 183 aa10.13□□□□□ -0.79
RFC4-204ENST00000417876 RSPH6AQ9H0K4 717 aa10.13□□□□□ -0.79
RFC4-204ENST00000417876 PSEN2P49810 448 aa10.12□□□□□ -0.79
RFC4-204ENST00000417876 FBXO31Q5XUX0 539 aaPredicted RBP10.12□□□□□ -0.79
RFC4-204ENST00000417876 TBC1D2Q9BYX2 928 aa10.12□□□□□ -0.79
RFC4-204ENST00000417876 CD46P15529 392 aa10.11□□□□□ -0.79
RFC4-204ENST00000417876 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
RFC4-204ENST00000417876 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
RFC4-204ENST00000417876 MARVELD3Q96A59 401 aa10.1□□□□□ -0.79
RFC4-204ENST00000417876 ZBED2Q9BTP6 218 aa10.1□□□□□ -0.79
RFC4-204ENST00000417876 TMEM134Q9H6X4 195 aa10.1□□□□□ -0.79
RFC4-204ENST00000417876 NBPF26B4DH59 902 aa10.09□□□□□ -0.79
RFC4-204ENST00000417876 DNAJB2P25686 324 aa10.09□□□□□ -0.79
RFC4-204ENST00000417876 SPIRE2Q8WWL2 714 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms