RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ATP10AO60312 1499 aa23.84■■□□□ 1.41
SSBP3-205ENST00000417664 KIDINS220Q9ULH0 1771 aa23.83■■□□□ 1.41
SSBP3-205ENST00000417664 MYT1LQ9UL68 1186 aa23.81■■□□□ 1.4
SSBP3-205ENST00000417664 KANK1Q14678 1352 aa23.79■■□□□ 1.4
SSBP3-205ENST00000417664 CCDC144AA2RUR9 1427 aa23.79■■□□□ 1.4
SSBP3-205ENST00000417664 HECW2Q9P2P5 1572 aa23.79■■□□□ 1.4
SSBP3-205ENST00000417664 VWDEQ8N2E2 1590 aa23.77■■□□□ 1.4
SSBP3-205ENST00000417664 DIP2BQ9P265 1576 aa23.77■■□□□ 1.4
SSBP3-205ENST00000417664 UHRF1BP1Q6BDS2 1440 aa23.76■■□□□ 1.39
SSBP3-205ENST00000417664 PRDM15P57071 1507 aaPredicted RBP23.76■■□□□ 1.39
SSBP3-205ENST00000417664 A2MP01023 1474 aa23.75■■□□□ 1.39
SSBP3-205ENST00000417664 PLA2R1Q13018 1463 aa23.75■■□□□ 1.39
SSBP3-205ENST00000417664 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.398e-7■■■■□ 25.5
SSBP3-205ENST00000417664 NBPF8Q3BBV2 869 aa23.73■■□□□ 1.39
SSBP3-205ENST00000417664 TET3O43151 1660 aa23.73■■□□□ 1.39
SSBP3-205ENST00000417664 KIF3BO15066 747 aa23.73■■□□□ 1.39
SSBP3-205ENST00000417664 MIER1Q8N108 512 aa23.73■■□□□ 1.39
SSBP3-205ENST00000417664 FAM69CQ0P6D2 419 aa23.71■■□□□ 1.39
SSBP3-205ENST00000417664 BCORL1Q5H9F3 1711 aa23.7■■□□□ 1.38
SSBP3-205ENST00000417664 RNF17Q9BXT8 1623 aaKnown RBP23.69■■□□□ 1.38
SSBP3-205ENST00000417664 MROH1Q8NDA8 1641 aa23.69■■□□□ 1.38
SSBP3-205ENST00000417664 E9PCH4 1651 aa23.68■■□□□ 1.38
SSBP3-205ENST00000417664 RICTORQ6R327 1708 aa23.68■■□□□ 1.38
SSBP3-205ENST00000417664 HSPA5P11021 654 aaKnown RBP23.67■■□□□ 1.38
SSBP3-205ENST00000417664 LMTK2Q8IWU2 1503 aa23.67■■□□□ 1.38
SSBP3-205ENST00000417664 PTPRTO14522 1441 aa23.67■■□□□ 1.38
SSBP3-205ENST00000417664 TRPM2O94759 1503 aa23.65■■□□□ 1.38
SSBP3-205ENST00000417664 ABCA6Q8N139 1617 aa23.64■■□□□ 1.38
SSBP3-205ENST00000417664 FRMPD1Q5SYB0 1578 aa23.64■■□□□ 1.38
SSBP3-205ENST00000417664 RALGAPBQ86X10 1494 aa23.64■■□□□ 1.38
SSBP3-205ENST00000417664 RAPGEF3O95398 923 aa23.64■■□□□ 1.37
SSBP3-205ENST00000417664 HIRIP3Q9BW71 556 aaPredicted RBP23.64■■□□□ 1.37
SSBP3-205ENST00000417664 SPATA31E1Q6ZUB1 1445 aa23.63■■□□□ 1.37
SSBP3-205ENST00000417664 SPHKAPQ2M3C7 1700 aa23.61■■□□□ 1.37
SSBP3-205ENST00000417664 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
SSBP3-205ENST00000417664 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
SSBP3-205ENST00000417664 DCAF11Q8TEB1 546 aa23.6■■□□□ 1.37
SSBP3-205ENST00000417664 DIP2CQ9Y2E4 1556 aa23.6■■□□□ 1.37
SSBP3-205ENST00000417664 STAC3Q96MF2 364 aa23.6■■□□□ 1.37
SSBP3-205ENST00000417664 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
SSBP3-205ENST00000417664 PPRC1Q5VV67 1664 aaKnown RBP23.58■■□□□ 1.37
SSBP3-205ENST00000417664 NEURL4Q96JN8 1562 aa23.58■■□□□ 1.36
SSBP3-205ENST00000417664 ZNF326Q5BKZ1 582 aaKnown RBP23.55■■□□□ 1.36
SSBP3-205ENST00000417664 PRAG1Q86YV5 1406 aa23.55■■□□□ 1.36
SSBP3-205ENST00000417664 KDM2AQ9Y2K7 1162 aa23.54■■□□□ 1.36
SSBP3-205ENST00000417664 CEP152O94986 1710 aa23.53■■□□□ 1.36
SSBP3-205ENST00000417664 USP47Q96K76 1375 aa23.53■■□□□ 1.36
SSBP3-205ENST00000417664 RGL3Q3MIN7 710 aa23.51■■□□□ 1.35
SSBP3-205ENST00000417664 TSPOAP1O95153 1857 aa23.51■■□□□ 1.35
SSBP3-205ENST00000417664 KIF13AQ9H1H9 1805 aa23.51■■□□□ 1.35
SSBP3-205ENST00000417664 WASHC2AQ641Q2 1341 aa23.51■■□□□ 1.35
SSBP3-205ENST00000417664 CLTCL1P53675 1640 aa23.5■■□□□ 1.35
SSBP3-205ENST00000417664 CARD11Q9BXL7 1154 aa23.49■■□□□ 1.35
SSBP3-205ENST00000417664 TRPM1Q7Z4N2 1603 aa23.49■■□□□ 1.35
SSBP3-205ENST00000417664 POLR1AO95602 1720 aaPredicted RBP23.49■■□□□ 1.35
SSBP3-205ENST00000417664 YEATS2Q9ULM3 1422 aa23.48■■□□□ 1.35
SSBP3-205ENST00000417664 GGT6Q6P531 493 aa23.48■■□□□ 1.35
SSBP3-205ENST00000417664 REREQ9P2R6 1566 aa23.48■■□□□ 1.35
SSBP3-205ENST00000417664 ABCC3O15438 1527 aa23.48■■□□□ 1.35
SSBP3-205ENST00000417664 ARID4BQ4LE39 1312 aaPredicted RBP23.48■■□□□ 1.35
SSBP3-205ENST00000417664 GPRASP1Q5JY77 1395 aa23.47■■□□□ 1.35
SSBP3-205ENST00000417664 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
SSBP3-205ENST00000417664 CENPBP07199 599 aaPredicted RBP23.47■■□□□ 1.35
SSBP3-205ENST00000417664 ROCK2O75116 1388 aaKnown RBP23.46■■□□□ 1.35
SSBP3-205ENST00000417664 WASHC2CQ9Y4E1 1318 aa23.46■■□□□ 1.35
SSBP3-205ENST00000417664 ZC3H13Q5T200 1668 aaKnown RBP23.46■■□□□ 1.35
SSBP3-205ENST00000417664 LAMC1P11047 1609 aa23.46■■□□□ 1.35
SSBP3-205ENST00000417664 CNTLNQ9NXG0 1405 aa23.44■■□□□ 1.34
SSBP3-205ENST00000417664 NPATQ14207 1427 aa23.44■■□□□ 1.34
SSBP3-205ENST00000417664 ANP32CO43423 234 aa23.43■■□□□ 1.34
SSBP3-205ENST00000417664 ARHGAP31Q2M1Z3 1444 aa23.43■■□□□ 1.34
SSBP3-205ENST00000417664 AGLP35573 1532 aa23.41■■□□□ 1.34
SSBP3-205ENST00000417664 CAMSAP1Q5T5Y3 1602 aa23.41■■□□□ 1.34
SSBP3-205ENST00000417664 KIF1BO60333 1816 aa23.4■■□□□ 1.34
SSBP3-205ENST00000417664 PPP6R1Q9UPN7 881 aa23.4■■□□□ 1.34
SSBP3-205ENST00000417664 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
SSBP3-205ENST00000417664 KIF7Q2M1P5 1343 aa23.38■■□□□ 1.33
SSBP3-205ENST00000417664 CCER2I3L3R5 266 aa23.37■■□□□ 1.33
SSBP3-205ENST00000417664 NOS1P29475 1434 aa23.37■■□□□ 1.33
SSBP3-205ENST00000417664 MADDQ8WXG6 1647 aa23.36■■□□□ 1.33
SSBP3-205ENST00000417664 MYOM2P54296 1465 aa23.35■■□□□ 1.33
SSBP3-205ENST00000417664 ADGRB3O60242 1522 aa23.33■■□□□ 1.33
SSBP3-205ENST00000417664 UGGT1Q9NYU2 1555 aa23.32■■□□□ 1.32
SSBP3-205ENST00000417664 ST20-MTHFSA0A0A6YYL1 179 aa23.32■■□□□ 1.32
SSBP3-205ENST00000417664 KIAA1210Q9ULL0 1709 aa23.32■■□□□ 1.32
SSBP3-205ENST00000417664 ARHGEF40Q8TER5 1519 aa23.31■■□□□ 1.32
SSBP3-205ENST00000417664 NBPF1Q3BBV0 1214 aa23.31■■□□□ 1.32
SSBP3-205ENST00000417664 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
SSBP3-205ENST00000417664 RPGRIP1LQ68CZ1 1315 aa23.29■■□□□ 1.32
SSBP3-205ENST00000417664 IFT172Q9UG01 1749 aa23.28■■□□□ 1.32
SSBP3-205ENST00000417664 PIK3C2BO00750 1634 aa23.28■■□□□ 1.32
SSBP3-205ENST00000417664 YTHDC1Q96MU7 727 aaKnown RBP23.28■■□□□ 1.32
SSBP3-205ENST00000417664 SLC52A1Q9NWF4 448 aa23.26■■□□□ 1.31
SSBP3-205ENST00000417664 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
SSBP3-205ENST00000417664 SIGLEC1Q9BZZ2 1709 aa23.25■■□□□ 1.31
SSBP3-205ENST00000417664 MROH2AA6NES4 1674 aa23.25■■□□□ 1.31
SSBP3-205ENST00000417664 SYNMO15061 1565 aa23.24■■□□□ 1.31
SSBP3-205ENST00000417664 CFAP65Q6ZU64 1925 aaKnown RBP23.24■■□□□ 1.31
SSBP3-205ENST00000417664 SCAF11Q99590 1463 aaKnown RBP23.21■■□□□ 1.31
SSBP3-205ENST00000417664 IQGAP1P46940 1657 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms