RNA–Protein interactions for RNA: ENST00000417382.5

HMG20B-204, Transcript of high mobility group 20B, humanhuman

TSL 4

Gene HMG20B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-204ENST00000417382 NPATQ14207 1427 aa32.47■■■□□ 2.79
HMG20B-204ENST00000417382 ERBINQ96RT1 1412 aa32.46■■■□□ 2.79
HMG20B-204ENST00000417382 RNF17Q9BXT8 1623 aaKnown RBP32.45■■■□□ 2.79
HMG20B-204ENST00000417382 ADGRL2O95490 1459 aa32.45■■■□□ 2.79
HMG20B-204ENST00000417382 CLTCQ00610 1675 aaKnown RBP32.45■■■□□ 2.79
HMG20B-204ENST00000417382 NCOA1Q15788 1441 aa32.44■■■□□ 2.78
HMG20B-204ENST00000417382 PREX1Q8TCU6 1659 aa32.43■■■□□ 2.78
HMG20B-204ENST00000417382 KDM5DQ9BY66 1539 aa32.43■■■□□ 2.78
HMG20B-204ENST00000417382 RRP7BPQ9NSQ0 103 aa32.43■■■□□ 2.78
HMG20B-204ENST00000417382 PPARGC1BQ86YN6 1023 aaKnown RBP32.41■■■□□ 2.78
HMG20B-204ENST00000417382 WASHC2CQ9Y4E1 1318 aa32.4■■■□□ 2.78
HMG20B-204ENST00000417382 UHRF1BP1Q6BDS2 1440 aa32.4■■■□□ 2.78
HMG20B-204ENST00000417382 CHIC2Q9UKJ5 165 aa32.39■■■□□ 2.78
HMG20B-204ENST00000417382 PTPRKQ15262 1439 aa32.38■■■□□ 2.77
HMG20B-204ENST00000417382 MROH1Q8NDA8 1641 aa32.33■■■□□ 2.77
HMG20B-204ENST00000417382 RRBP1Q9P2E9 1410 aaKnown RBP32.32■■■□□ 2.76
HMG20B-204ENST00000417382 PZPP20742 1482 aa32.31■■■□□ 2.76
HMG20B-204ENST00000417382 ROCK1Q13464 1354 aa32.31■■■□□ 2.76
HMG20B-204ENST00000417382 ABCC3O15438 1527 aa32.31■■■□□ 2.76
HMG20B-204ENST00000417382 ZC3H13Q5T200 1668 aaKnown RBP32.31■■■□□ 2.76
HMG20B-204ENST00000417382 HSPA2P54652 639 aa32.29■■■□□ 2.76
HMG20B-204ENST00000417382 PRDM15P57071 1507 aaPredicted RBP32.29■■■□□ 2.76
HMG20B-204ENST00000417382 DEPDC5O75140 1603 aa32.26■■■□□ 2.76
HMG20B-204ENST00000417382 ANKRD50Q9ULJ7 1429 aa32.24■■■□□ 2.75
HMG20B-204ENST00000417382 KANK1Q14678 1352 aa32.2■■■□□ 2.75
HMG20B-204ENST00000417382 TNRQ92752 1358 aa32.19■■■□□ 2.74
HMG20B-204ENST00000417382 ARHGAP31Q2M1Z3 1444 aa32.18■■■□□ 2.74
HMG20B-204ENST00000417382 FBXO31Q5XUX0 539 aaPredicted RBP32.18■■■□□ 2.74
HMG20B-204ENST00000417382 MYO3AQ8NEV4 1616 aa32.18■■■□□ 2.74
HMG20B-204ENST00000417382 VWDEQ8N2E2 1590 aa32.16■■■□□ 2.74
HMG20B-204ENST00000417382 ZNF142P52746 1687 aaPredicted RBP32.16■■■□□ 2.74
HMG20B-204ENST00000417382 LMTK2Q8IWU2 1503 aa32.16■■■□□ 2.74
HMG20B-204ENST00000417382 CAMSAP1Q5T5Y3 1602 aa32.13■■■□□ 2.73
HMG20B-204ENST00000417382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.13■■■□□ 2.734e-7■■□□□ 13.8
HMG20B-204ENST00000417382 CEP170BQ9Y4F5 1589 aaPredicted RBP32.13■■■□□ 2.73
HMG20B-204ENST00000417382 CEP152O94986 1710 aa32.12■■■□□ 2.73
HMG20B-204ENST00000417382 A2ML1A8K2U0 1454 aa32.12■■■□□ 2.73
HMG20B-204ENST00000417382 SPATA31D1Q6ZQQ2 1576 aa32.11■■■□□ 2.73
HMG20B-204ENST00000417382 ITGAEP38570 1179 aa32.11■■■□□ 2.73
HMG20B-204ENST00000417382 NLRP1Q9C000 1473 aa32.1■■■□□ 2.73
HMG20B-204ENST00000417382 DMRT2Q9Y5R5 561 aa32.1■■■□□ 2.73
HMG20B-204ENST00000417382 ERVK-7P63135 1459 aa32.09■■■□□ 2.73
HMG20B-204ENST00000417382 PLA2R1Q13018 1463 aa32.06■■■□□ 2.72
HMG20B-204ENST00000417382 STRCQ7RTU9 1775 aa32.06■■■□□ 2.72
HMG20B-204ENST00000417382 UNC13BO14795 1591 aa32.02■■■□□ 2.72
HMG20B-204ENST00000417382 PTPRTO14522 1441 aa32■■■□□ 2.71
HMG20B-204ENST00000417382 EFCAB6Q5THR3 1501 aa32■■■□□ 2.71
HMG20B-204ENST00000417382 PKD2Q13563 968 aa31.98■■■□□ 2.71
HMG20B-204ENST00000417382 RPRD2Q5VT52 1461 aaKnown RBP31.97■■■□□ 2.71
HMG20B-204ENST00000417382 THEMISQ8N1K5 641 aaPredicted RBP31.96■■■□□ 2.71
HMG20B-204ENST00000417382 UGGT1Q9NYU2 1555 aa31.94■■■□□ 2.7
HMG20B-204ENST00000417382 NAIPQ13075 1403 aa31.93■■■□□ 2.7
HMG20B-204ENST00000417382 TET3O43151 1660 aa31.92■■■□□ 2.7
HMG20B-204ENST00000417382 HFM1A2PYH4 1435 aa31.92■■■□□ 2.7
HMG20B-204ENST00000417382 NOS1P29475 1434 aa31.91■■■□□ 2.7
HMG20B-204ENST00000417382 IQGAP3Q86VI3 1631 aa31.89■■■□□ 2.7
HMG20B-204ENST00000417382 CFAP65Q6ZU64 1925 aaKnown RBP31.89■■■□□ 2.7
HMG20B-204ENST00000417382 NUP155O75694 1391 aa31.89■■■□□ 2.7
HMG20B-204ENST00000417382 NCKAP5LQ9HCH0 1330 aa31.88■■■□□ 2.69
HMG20B-204ENST00000417382 GCC2Q8IWJ2 1684 aa31.86■■■□□ 2.69
HMG20B-204ENST00000417382 SLC52A1Q9NWF4 448 aa31.84■■■□□ 2.69
HMG20B-204ENST00000417382 ANKLE2Q86XL3 938 aa31.83■■■□□ 2.69
HMG20B-204ENST00000417382 SYNMO15061 1565 aa31.81■■■□□ 2.68
HMG20B-204ENST00000417382 UBR1Q8IWV7 1749 aa31.8■■■□□ 2.68
HMG20B-204ENST00000417382 IDI1Q13907 227 aa31.79■■■□□ 2.68
HMG20B-204ENST00000417382 KDM5AP29375 1690 aaKnown RBP31.79■■■□□ 2.68
HMG20B-204ENST00000417382 POLR1AO95602 1720 aaPredicted RBP31.76■■■□□ 2.67
HMG20B-204ENST00000417382 MED14O60244 1454 aa31.76■■■□□ 2.67
HMG20B-204ENST00000417382 E9PCH4 1651 aa31.75■■■□□ 2.67
HMG20B-204ENST00000417382 SLIT1O75093 1534 aa31.75■■■□□ 2.67
HMG20B-204ENST00000417382 NEURL4Q96JN8 1562 aa31.74■■■□□ 2.67
HMG20B-204ENST00000417382 ARHGAP23Q9P227 1491 aa31.74■■■□□ 2.67
HMG20B-204ENST00000417382 PIK3C2BO00750 1634 aa31.74■■■□□ 2.67
HMG20B-204ENST00000417382 STAG3Q9UJ98 1225 aa31.7■■■□□ 2.67
HMG20B-204ENST00000417382 TMEM2Q9UHN6 1383 aa31.68■■■□□ 2.66
HMG20B-204ENST00000417382 CERKQ8TCT0 537 aa31.68■■■□□ 2.66
HMG20B-204ENST00000417382 ADGRB3O60242 1522 aa31.68■■■□□ 2.66
HMG20B-204ENST00000417382 NPHP4O75161 1426 aaPredicted RBP31.67■■■□□ 2.66
HMG20B-204ENST00000417382 ACIN1Q9UKV3 1341 aaKnown RBP31.67■■■□□ 2.66
HMG20B-204ENST00000417382 SCAF11Q99590 1463 aaKnown RBP31.66■■■□□ 2.66
HMG20B-204ENST00000417382 LTBP4Q8N2S1 1624 aa31.65■■■□□ 2.66
HMG20B-204ENST00000417382 EID1Q9Y6B2 187 aa31.65■■■□□ 2.66
HMG20B-204ENST00000417382 LTKP29376 864 aa31.62■■■□□ 2.65
HMG20B-204ENST00000417382 TXNDC2Q86VQ3 553 aa31.62■■■□□ 2.65
HMG20B-204ENST00000417382 FBXO41Q8TF61 875 aa31.6■■■□□ 2.65
HMG20B-204ENST00000417382 TRIM52Q96A61 297 aa31.6■■■□□ 2.65
HMG20B-204ENST00000417382 IQGAP1P46940 1657 aa31.6■■■□□ 2.65
HMG20B-204ENST00000417382 ZNF335Q9H4Z2 1342 aaPredicted RBP31.58■■■□□ 2.65
HMG20B-204ENST00000417382 ILDR1Q86SU0 546 aaPredicted RBP31.57■■■□□ 2.64
HMG20B-204ENST00000417382 IQSEC2Q5JU85 1478 aa31.56■■■□□ 2.64
HMG20B-204ENST00000417382 SETD5Q9C0A6 1442 aa31.56■■■□□ 2.64
HMG20B-204ENST00000417382 TMEM131LA2VDJ0 1609 aa31.56■■■□□ 2.64
HMG20B-204ENST00000417382 SLC4A1APQ9BWU0 796 aaKnown RBP31.54■■■□□ 2.64
HMG20B-204ENST00000417382 SPHKAPQ2M3C7 1700 aa31.54■■■□□ 2.64
HMG20B-204ENST00000417382 HDGFP51858 240 aaKnown RBP31.53■■■□□ 2.64
HMG20B-204ENST00000417382 ZFYVE9O95405 1425 aa31.51■■■□□ 2.64
HMG20B-204ENST00000417382 TRPM2O94759 1503 aa31.5■■■□□ 2.63
HMG20B-204ENST00000417382 CPS1P31327 1500 aa31.49■■■□□ 2.63
HMG20B-204ENST00000417382 RIMS2Q9UQ26 1411 aa31.47■■■□□ 2.63
HMG20B-204ENST00000417382 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms