RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
MDC1-203ENST00000417033 PLXNC1O60486 1568 aa12.18□□□□□ -0.46
MDC1-203ENST00000417033 NAIPQ13075 1403 aa12.18□□□□□ -0.46
MDC1-203ENST00000417033 ANKRD30AQ9BXX3 1397 aa12.18□□□□□ -0.46
MDC1-203ENST00000417033 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
MDC1-203ENST00000417033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.463e-8■■■□□ 14.6
MDC1-203ENST00000417033 HFM1A2PYH4 1435 aa12.17□□□□□ -0.46
MDC1-203ENST00000417033 SIGLEC1Q9BZZ2 1709 aa12.16□□□□□ -0.46
MDC1-203ENST00000417033 MAGI2Q86UL8 1455 aa12.15□□□□□ -0.46
MDC1-203ENST00000417033 GCC2Q8IWJ2 1684 aa12.15□□□□□ -0.46
MDC1-203ENST00000417033 A2MP01023 1474 aa12.14□□□□□ -0.47
MDC1-203ENST00000417033 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
MDC1-203ENST00000417033 ATP10AO60312 1499 aa12.13□□□□□ -0.47
MDC1-203ENST00000417033 SETD5Q9C0A6 1442 aa12.12□□□□□ -0.47
MDC1-203ENST00000417033 ANKRD50Q9ULJ7 1429 aa12.12□□□□□ -0.47
MDC1-203ENST00000417033 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
MDC1-203ENST00000417033 RAB3GAP2Q9H2M9 1393 aa12.12□□□□□ -0.47
MDC1-203ENST00000417033 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
MDC1-203ENST00000417033 ERBINQ96RT1 1412 aa12.1□□□□□ -0.47
MDC1-203ENST00000417033 REREQ9P2R6 1566 aa12.09□□□□□ -0.47
MDC1-203ENST00000417033 MROH1Q8NDA8 1641 aa12.08□□□□□ -0.48
MDC1-203ENST00000417033 KIF3BO15066 747 aa12.07□□□□□ -0.48
MDC1-203ENST00000417033 EIF2AK4Q9P2K8 1649 aaKnown RBP12.06□□□□□ -0.48
MDC1-203ENST00000417033 AGLP35573 1532 aa12.06□□□□□ -0.48
MDC1-203ENST00000417033 MLECQ14165 292 aa12.05□□□□□ -0.48
MDC1-203ENST00000417033 UNC13BO14795 1591 aa12.05□□□□□ -0.48
MDC1-203ENST00000417033 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
MDC1-203ENST00000417033 BCORL1Q5H9F3 1711 aa12.04□□□□□ -0.48
MDC1-203ENST00000417033 ARID4BQ4LE39 1312 aaPredicted RBP12.04□□□□□ -0.48
MDC1-203ENST00000417033 PRDM15P57071 1507 aaPredicted RBP12.03□□□□□ -0.48
MDC1-203ENST00000417033 GGT6Q6P531 493 aa12.03□□□□□ -0.48
MDC1-203ENST00000417033 DEPDC5O75140 1603 aa12.03□□□□□ -0.48
MDC1-203ENST00000417033 PZPP20742 1482 aa12.02□□□□□ -0.48
MDC1-203ENST00000417033 TRIM52Q96A61 297 aa12.02□□□□□ -0.49
MDC1-203ENST00000417033 NUP155O75694 1391 aa12.01□□□□□ -0.49
MDC1-203ENST00000417033 KDM5DQ9BY66 1539 aa12.01□□□□□ -0.49
MDC1-203ENST00000417033 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
MDC1-203ENST00000417033 ABCC3O15438 1527 aa11.99□□□□□ -0.49
MDC1-203ENST00000417033 FAM135AQ9P2D6 1515 aa11.99□□□□□ -0.49
MDC1-203ENST00000417033 CEP152O94986 1710 aa11.99□□□□□ -0.49
MDC1-203ENST00000417033 IQGAP3Q86VI3 1631 aa11.98□□□□□ -0.49
MDC1-203ENST00000417033 DHX57Q6P158 1386 aaKnown RBP11.98□□□□□ -0.49
MDC1-203ENST00000417033 HRCP23327 699 aa11.98□□□□□ -0.49
MDC1-203ENST00000417033 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
MDC1-203ENST00000417033 KANK1Q14678 1352 aa11.95□□□□□ -0.5
MDC1-203ENST00000417033 CLTCQ00610 1675 aaKnown RBP11.95□□□□□ -0.5
MDC1-203ENST00000417033 MPHOSPH9Q99550 1183 aa11.95□□□□□ -0.5
MDC1-203ENST00000417033 MADDQ8WXG6 1647 aa11.95□□□□□ -0.5
MDC1-203ENST00000417033 LMTK2Q8IWU2 1503 aa11.95□□□□□ -0.5
MDC1-203ENST00000417033 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
MDC1-203ENST00000417033 WASHC2CQ9Y4E1 1318 aa11.94□□□□□ -0.5
MDC1-203ENST00000417033 TET3O43151 1660 aa11.94□□□□□ -0.5
MDC1-203ENST00000417033 CAMSAP1Q5T5Y3 1602 aa11.93□□□□□ -0.5
MDC1-203ENST00000417033 EFCAB6Q5THR3 1501 aa11.93□□□□□ -0.5
MDC1-203ENST00000417033 PKD2Q13563 968 aa11.93□□□□□ -0.5
MDC1-203ENST00000417033 NPATQ14207 1427 aa11.93□□□□□ -0.5
MDC1-203ENST00000417033 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
MDC1-203ENST00000417033 E9PCH4 1651 aa11.92□□□□□ -0.5
MDC1-203ENST00000417033 ZC3H13Q5T200 1668 aaKnown RBP11.92□□□□□ -0.5
MDC1-203ENST00000417033 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
MDC1-203ENST00000417033 RIMS1Q86UR5 1692 aaKnown RBP11.91□□□□□ -0.5
MDC1-203ENST00000417033 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
MDC1-203ENST00000417033 CEBPAP49715 358 aaPredicted RBP11.9□□□□□ -0.5
MDC1-203ENST00000417033 FBXO31Q5XUX0 539 aaPredicted RBP11.9□□□□□ -0.5
MDC1-203ENST00000417033 PLA2R1Q13018 1463 aa11.89□□□□□ -0.51
MDC1-203ENST00000417033 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
MDC1-203ENST00000417033 ZMYM3Q14202 1370 aa11.89□□□□□ -0.51
MDC1-203ENST00000417033 ARHGAP31Q2M1Z3 1444 aa11.88□□□□□ -0.51
MDC1-203ENST00000417033 CNTLNQ9NXG0 1405 aa11.88□□□□□ -0.51
MDC1-203ENST00000417033 UGGT1Q9NYU2 1555 aa11.88□□□□□ -0.51
MDC1-203ENST00000417033 RNF39Q9H2S5 420 aa11.87□□□□□ -0.51
MDC1-203ENST00000417033 ESF1Q9H501 851 aaKnown RBP11.87□□□□□ -0.51
MDC1-203ENST00000417033 ANKRD30BQ9BXX2 1392 aa11.87□□□□□ -0.51
MDC1-203ENST00000417033 ERVK-7P63135 1459 aa11.87□□□□□ -0.51
MDC1-203ENST00000417033 MROH2AA6NES4 1674 aa11.87□□□□□ -0.51
MDC1-203ENST00000417033 C3P01024 1663 aa11.87□□□□□ -0.51
MDC1-203ENST00000417033 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
MDC1-203ENST00000417033 SYNMO15061 1565 aa11.86□□□□□ -0.51
MDC1-203ENST00000417033 CFAP65Q6ZU64 1925 aaKnown RBP11.86□□□□□ -0.51
MDC1-203ENST00000417033 PTPRTO14522 1441 aa11.86□□□□□ -0.51
MDC1-203ENST00000417033 NOS1P29475 1434 aa11.86□□□□□ -0.51
MDC1-203ENST00000417033 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
MDC1-203ENST00000417033 PREX1Q8TCU6 1659 aa11.85□□□□□ -0.51
MDC1-203ENST00000417033 PTPRMP28827 1452 aa11.85□□□□□ -0.51
MDC1-203ENST00000417033 RPRD2Q5VT52 1461 aaKnown RBP11.85□□□□□ -0.51
MDC1-203ENST00000417033 SIN3AQ96ST3 1273 aa11.85□□□□□ -0.51
MDC1-203ENST00000417033 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
MDC1-203ENST00000417033 SPHKAPQ2M3C7 1700 aa11.83□□□□□ -0.52
MDC1-203ENST00000417033 CLTCL1P53675 1640 aa11.83□□□□□ -0.52
MDC1-203ENST00000417033 TRPM2O94759 1503 aa11.83□□□□□ -0.52
MDC1-203ENST00000417033 TNRQ92752 1358 aa11.81□□□□□ -0.52
MDC1-203ENST00000417033 PIK3C2BO00750 1634 aa11.79□□□□□ -0.52
MDC1-203ENST00000417033 CCDC144AA2RUR9 1427 aa11.79□□□□□ -0.52
MDC1-203ENST00000417033 NEUROD1Q13562 356 aa11.79□□□□□ -0.52
MDC1-203ENST00000417033 IDI1Q13907 227 aa11.78□□□□□ -0.52
MDC1-203ENST00000417033 MYO3AQ8NEV4 1616 aa11.76□□□□□ -0.53
MDC1-203ENST00000417033 SPATA31E1Q6ZUB1 1445 aa11.76□□□□□ -0.53
MDC1-203ENST00000417033 ADGRB3O60242 1522 aa11.76□□□□□ -0.53
MDC1-203ENST00000417033 CHGAP10645 457 aaKnown RBP11.75□□□□□ -0.53
MDC1-203ENST00000417033 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms