RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
RBFOX2-208ENST00000416721 ADGBQ8N7X0 1667 aa17.21■□□□□ 0.35
RBFOX2-208ENST00000416721 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
RBFOX2-208ENST00000416721 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
RBFOX2-208ENST00000416721 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
RBFOX2-208ENST00000416721 THEMISQ8N1K5 641 aaPredicted RBP17.19■□□□□ 0.34
RBFOX2-208ENST00000416721 MYO3AQ8NEV4 1616 aa17.18■□□□□ 0.34
RBFOX2-208ENST00000416721 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
RBFOX2-208ENST00000416721 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
RBFOX2-208ENST00000416721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.17■□□□□ 0.34
RBFOX2-208ENST00000416721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.34
RBFOX2-208ENST00000416721 A2ML1A8K2U0 1454 aa17.17■□□□□ 0.34
RBFOX2-208ENST00000416721 PLA2R1Q13018 1463 aa17.16■□□□□ 0.34
RBFOX2-208ENST00000416721 RRP7BPQ9NSQ0 103 aa17.15■□□□□ 0.34
RBFOX2-208ENST00000416721 KDM5DQ9BY66 1539 aa17.15■□□□□ 0.34
RBFOX2-208ENST00000416721 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
RBFOX2-208ENST00000416721 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
RBFOX2-208ENST00000416721 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
RBFOX2-208ENST00000416721 PZPP20742 1482 aa17.12■□□□□ 0.33
RBFOX2-208ENST00000416721 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
RBFOX2-208ENST00000416721 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
RBFOX2-208ENST00000416721 MYOM3Q5VTT5 1437 aa17.11■□□□□ 0.33
RBFOX2-208ENST00000416721 ARHGEF5Q12774 1597 aa17.1■□□□□ 0.33
RBFOX2-208ENST00000416721 DNMT1P26358 1616 aaKnown RBP17.1■□□□□ 0.33
RBFOX2-208ENST00000416721 TOM1O60784 492 aa17.09■□□□□ 0.33
RBFOX2-208ENST00000416721 IQSEC2Q5JU85 1478 aa17.09■□□□□ 0.33
RBFOX2-208ENST00000416721 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
RBFOX2-208ENST00000416721 ZNF142P52746 1687 aaPredicted RBP17.09■□□□□ 0.33
RBFOX2-208ENST00000416721 STAG3Q9UJ98 1225 aa17.08■□□□□ 0.32
RBFOX2-208ENST00000416721 UGGT1Q9NYU2 1555 aa17.06■□□□□ 0.32
RBFOX2-208ENST00000416721 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
RBFOX2-208ENST00000416721 KIF15Q9NS87 1388 aa17.05■□□□□ 0.32
RBFOX2-208ENST00000416721 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
RBFOX2-208ENST00000416721 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
RBFOX2-208ENST00000416721 HSPA1LP34931 641 aa17.04■□□□□ 0.32
RBFOX2-208ENST00000416721 SHANK2Q9UPX8 1470 aa17.04■□□□□ 0.32
RBFOX2-208ENST00000416721 ABCC3O15438 1527 aa17.02■□□□□ 0.32
RBFOX2-208ENST00000416721 MAP3K1Q13233 1512 aa17.02■□□□□ 0.32
RBFOX2-208ENST00000416721 SOCS7O14512 581 aa17.02■□□□□ 0.32
RBFOX2-208ENST00000416721 TXNDC2Q86VQ3 553 aa17.02■□□□□ 0.32
RBFOX2-208ENST00000416721 KANK1Q14678 1352 aa17.02■□□□□ 0.31
RBFOX2-208ENST00000416721 EID1Q9Y6B2 187 aa17.01■□□□□ 0.31
RBFOX2-208ENST00000416721 ABCC5O15440 1437 aa17■□□□□ 0.31
RBFOX2-208ENST00000416721 SPATA31D1Q6ZQQ2 1576 aa17■□□□□ 0.31
RBFOX2-208ENST00000416721 BCANQ96GW7 911 aa17■□□□□ 0.31
RBFOX2-208ENST00000416721 DUOX2Q9NRD8 1548 aa17■□□□□ 0.31
RBFOX2-208ENST00000416721 ERVK-7P63135 1459 aa16.99■□□□□ 0.31
RBFOX2-208ENST00000416721 MAST1Q9Y2H9 1570 aa16.98■□□□□ 0.31
RBFOX2-208ENST00000416721 CPS1P31327 1500 aa16.97■□□□□ 0.31
RBFOX2-208ENST00000416721 ANKRD30AQ9BXX3 1397 aa16.97■□□□□ 0.31
RBFOX2-208ENST00000416721 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
RBFOX2-208ENST00000416721 DAPK1P53355 1430 aa16.96■□□□□ 0.31
RBFOX2-208ENST00000416721 LTKP29376 864 aa16.96■□□□□ 0.31
RBFOX2-208ENST00000416721 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.3
RBFOX2-208ENST00000416721 RNF17Q9BXT8 1623 aaKnown RBP16.95■□□□□ 0.3
RBFOX2-208ENST00000416721 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
RBFOX2-208ENST00000416721 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
RBFOX2-208ENST00000416721 ERBINQ96RT1 1412 aa16.94■□□□□ 0.3
RBFOX2-208ENST00000416721 POLR1AO95602 1720 aaPredicted RBP16.93■□□□□ 0.3
RBFOX2-208ENST00000416721 MED14O60244 1454 aa16.93■□□□□ 0.3
RBFOX2-208ENST00000416721 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
RBFOX2-208ENST00000416721 IDI1Q13907 227 aa16.91■□□□□ 0.3
RBFOX2-208ENST00000416721 SCAF11Q99590 1463 aaKnown RBP16.91■□□□□ 0.3
RBFOX2-208ENST00000416721 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
RBFOX2-208ENST00000416721 VWDEQ8N2E2 1590 aa16.9■□□□□ 0.3
RBFOX2-208ENST00000416721 ITGAEP38570 1179 aa16.9■□□□□ 0.3
RBFOX2-208ENST00000416721 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
RBFOX2-208ENST00000416721 SLC26A8Q96RN1 970 aa16.9■□□□□ 0.3
RBFOX2-208ENST00000416721 CEP152O94986 1710 aa16.9■□□□□ 0.3
RBFOX2-208ENST00000416721 MROH1Q8NDA8 1641 aa16.89■□□□□ 0.29
RBFOX2-208ENST00000416721 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
RBFOX2-208ENST00000416721 IQGAP1P46940 1657 aa16.88■□□□□ 0.29
RBFOX2-208ENST00000416721 RBM33Q96EV2 1170 aaKnown RBP16.88■□□□□ 0.29
RBFOX2-208ENST00000416721 DEPDC5O75140 1603 aa16.88■□□□□ 0.29
RBFOX2-208ENST00000416721 CFAP65Q6ZU64 1925 aaKnown RBP16.87■□□□□ 0.29
RBFOX2-208ENST00000416721 TMEM2Q9UHN6 1383 aa16.87■□□□□ 0.29
RBFOX2-208ENST00000416721 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
RBFOX2-208ENST00000416721 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
RBFOX2-208ENST00000416721 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
RBFOX2-208ENST00000416721 PROSER2Q86WR7 435 aaPredicted RBP16.86■□□□□ 0.29
RBFOX2-208ENST00000416721 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
RBFOX2-208ENST00000416721 SLC52A1Q9NWF4 448 aa16.82■□□□□ 0.28
RBFOX2-208ENST00000416721 UBR1Q8IWV7 1749 aa16.82■□□□□ 0.28
RBFOX2-208ENST00000416721 CROCC2H7BZ55 1655 aa16.81■□□□□ 0.28
RBFOX2-208ENST00000416721 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
RBFOX2-208ENST00000416721 HDGFP51858 240 aaKnown RBP16.8■□□□□ 0.28
RBFOX2-208ENST00000416721 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
RBFOX2-208ENST00000416721 SLIT1O75093 1534 aa16.8■□□□□ 0.28
RBFOX2-208ENST00000416721 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
RBFOX2-208ENST00000416721 ARHGAP23Q9P227 1491 aa16.8■□□□□ 0.28
RBFOX2-208ENST00000416721 PIK3C2BO00750 1634 aa16.79■□□□□ 0.28
RBFOX2-208ENST00000416721 KCNA6P17658 529 aa16.79■□□□□ 0.28
RBFOX2-208ENST00000416721 C14orf37Q86TY3 774 aa16.79■□□□□ 0.28
RBFOX2-208ENST00000416721 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
RBFOX2-208ENST00000416721 MED1Q15648 1581 aaPredicted RBP16.77■□□□□ 0.28
RBFOX2-208ENST00000416721 LMTK2Q8IWU2 1503 aa16.75■□□□□ 0.27
RBFOX2-208ENST00000416721 STRCP1A6NGW2 1772 aa16.74■□□□□ 0.27
RBFOX2-208ENST00000416721 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
RBFOX2-208ENST00000416721 NOS1P29475 1434 aa16.73■□□□□ 0.27
RBFOX2-208ENST00000416721 SYNMO15061 1565 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms