RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
CHEK2-210ENST00000416671 AFAP1Q8N556 730 aa18.79■□□□□ 0.6
CHEK2-210ENST00000416671 TRAPPC8Q9Y2L5 1435 aa18.79■□□□□ 0.6
CHEK2-210ENST00000416671 PAK3O75914 559 aaPredicted RBP18.78■□□□□ 0.6
CHEK2-210ENST00000416671 ABCA9Q8IUA7 1624 aa18.76■□□□□ 0.59
CHEK2-210ENST00000416671 RSPH4AQ5TD94 716 aa18.76■□□□□ 0.59
CHEK2-210ENST00000416671 ABCC1P33527 1531 aa18.75■□□□□ 0.59
CHEK2-210ENST00000416671 FANCAO15360 1455 aa18.75■□□□□ 0.59
CHEK2-210ENST00000416671 CCDC7Q96M83 1385 aa18.75■□□□□ 0.59
CHEK2-210ENST00000416671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.592e-6■□□□□ 8.5
CHEK2-210ENST00000416671 PLEKHH2Q8IVE3 1493 aa18.74■□□□□ 0.59
CHEK2-210ENST00000416671 KDM2AQ9Y2K7 1162 aa18.74■□□□□ 0.59
CHEK2-210ENST00000416671 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
CHEK2-210ENST00000416671 ZBED9Q6R2W3 1325 aa18.72■□□□□ 0.59
CHEK2-210ENST00000416671 KIF7Q2M1P5 1343 aa18.72■□□□□ 0.59
CHEK2-210ENST00000416671 CNTLNQ9NXG0 1405 aa18.71■□□□□ 0.59
CHEK2-210ENST00000416671 CCDC184Q52MB2 194 aa18.71■□□□□ 0.59
CHEK2-210ENST00000416671 RTL5Q5HYW3 569 aaPredicted RBP18.71■□□□□ 0.59
CHEK2-210ENST00000416671 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
CHEK2-210ENST00000416671 ANO8Q9HCE9 1232 aaPredicted RBP18.71■□□□□ 0.59
CHEK2-210ENST00000416671 CNGB1Q14028 1251 aaPredicted RBP18.69■□□□□ 0.58
CHEK2-210ENST00000416671 FAM9BQ8IZU0 186 aa18.69■□□□□ 0.58
CHEK2-210ENST00000416671 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
CHEK2-210ENST00000416671 KDM5DQ9BY66 1539 aa18.69■□□□□ 0.58
CHEK2-210ENST00000416671 ANP32AP39687 249 aaKnown RBP18.69■□□□□ 0.58
CHEK2-210ENST00000416671 SCAPERQ9BY12 1400 aa18.69■□□□□ 0.58
CHEK2-210ENST00000416671 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
CHEK2-210ENST00000416671 FAM135AQ9P2D6 1515 aa18.68■□□□□ 0.58
CHEK2-210ENST00000416671 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
CHEK2-210ENST00000416671 SPAG9O60271 1321 aaKnown RBP18.68■□□□□ 0.58
CHEK2-210ENST00000416671 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
CHEK2-210ENST00000416671 IPO9Q96P70 1041 aaKnown RBP18.68■□□□□ 0.58
CHEK2-210ENST00000416671 MAST1Q9Y2H9 1570 aa18.67■□□□□ 0.58
CHEK2-210ENST00000416671 USP47Q96K76 1375 aa18.67■□□□□ 0.58
CHEK2-210ENST00000416671 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
CHEK2-210ENST00000416671 PRKRIP1Q9H875 184 aaPredicted RBP18.65■□□□□ 0.58
CHEK2-210ENST00000416671 ZBTB47Q9UFB7 747 aaPredicted RBP18.64■□□□□ 0.57
CHEK2-210ENST00000416671 RGL3Q3MIN7 710 aa18.64■□□□□ 0.57
CHEK2-210ENST00000416671 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
CHEK2-210ENST00000416671 BCORL1Q5H9F3 1711 aa18.61■□□□□ 0.57
CHEK2-210ENST00000416671 PLXNC1O60486 1568 aa18.61■□□□□ 0.57
CHEK2-210ENST00000416671 ZFYVE16Q7Z3T8 1539 aa18.6■□□□□ 0.57
CHEK2-210ENST00000416671 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
CHEK2-210ENST00000416671 FAM69CQ0P6D2 419 aa18.59■□□□□ 0.57
CHEK2-210ENST00000416671 KDM5CP41229 1560 aa18.59■□□□□ 0.57
CHEK2-210ENST00000416671 CCDC136Q96JN2 1154 aa18.58■□□□□ 0.57
CHEK2-210ENST00000416671 CCDC144AA2RUR9 1427 aa18.58■□□□□ 0.56
CHEK2-210ENST00000416671 UHRF1BP1Q6BDS2 1440 aa18.58■□□□□ 0.56
CHEK2-210ENST00000416671 DUOX2Q9NRD8 1548 aa18.58■□□□□ 0.56
CHEK2-210ENST00000416671 POLR1AO95602 1720 aaPredicted RBP18.57■□□□□ 0.56
CHEK2-210ENST00000416671 RAPGEF3O95398 923 aa18.57■□□□□ 0.56
CHEK2-210ENST00000416671 RALGAPBQ86X10 1494 aa18.57■□□□□ 0.56
CHEK2-210ENST00000416671 SMG6Q86US8 1419 aaKnown RBP18.56■□□□□ 0.56
CHEK2-210ENST00000416671 PLA2R1Q13018 1463 aa18.56■□□□□ 0.56
CHEK2-210ENST00000416671 UNC13BO14795 1591 aa18.56■□□□□ 0.56
CHEK2-210ENST00000416671 ATP7AQ04656 1500 aa18.56■□□□□ 0.56
CHEK2-210ENST00000416671 ST20-MTHFSA0A0A6YYL1 179 aa18.56■□□□□ 0.56
CHEK2-210ENST00000416671 RTEL1-TNFRSF6BF6WH68 1400 aa18.55■□□□□ 0.56
CHEK2-210ENST00000416671 IL27Q8NEV9 243 aa18.53■□□□□ 0.56
CHEK2-210ENST00000416671 ROCK2O75116 1388 aaKnown RBP18.53■□□□□ 0.56
CHEK2-210ENST00000416671 INO80Q9ULG1 1556 aaPredicted RBP18.53■□□□□ 0.56
CHEK2-210ENST00000416671 ERBINQ96RT1 1412 aa18.53■□□□□ 0.56
CHEK2-210ENST00000416671 NBPF1Q3BBV0 1214 aa18.51■□□□□ 0.55
CHEK2-210ENST00000416671 RNF123Q5XPI4 1314 aa18.51■□□□□ 0.55
CHEK2-210ENST00000416671 IQGAP3Q86VI3 1631 aa18.5■□□□□ 0.55
CHEK2-210ENST00000416671 KIF3BO15066 747 aa18.5■□□□□ 0.55
CHEK2-210ENST00000416671 ZNF518AQ6AHZ1 1483 aa18.5■□□□□ 0.55
CHEK2-210ENST00000416671 POGZQ7Z3K3 1410 aa18.5■□□□□ 0.55
CHEK2-210ENST00000416671 NUDCQ9Y266 331 aa18.5■□□□□ 0.55
CHEK2-210ENST00000416671 KIDINS220Q9ULH0 1771 aa18.5■□□□□ 0.55
CHEK2-210ENST00000416671 MAP3K4Q9Y6R4 1608 aa18.5■□□□□ 0.55
CHEK2-210ENST00000416671 DHX29Q7Z478 1369 aaKnown RBP18.49■□□□□ 0.55
CHEK2-210ENST00000416671 TSPOAP1O95153 1857 aa18.48■□□□□ 0.55
CHEK2-210ENST00000416671 DIP2BQ9P265 1576 aa18.48■□□□□ 0.55
CHEK2-210ENST00000416671 PRAG1Q86YV5 1406 aa18.47■□□□□ 0.55
CHEK2-210ENST00000416671 A2MP01023 1474 aa18.47■□□□□ 0.55
CHEK2-210ENST00000416671 CFAP74Q9C0B2 1584 aa18.47■□□□□ 0.55
CHEK2-210ENST00000416671 NEO1Q92859 1461 aa18.46■□□□□ 0.55
CHEK2-210ENST00000416671 RTN4Q9NQC3 1192 aaKnown RBP18.45■□□□□ 0.54
CHEK2-210ENST00000416671 MAGI2Q86UL8 1455 aa18.45■□□□□ 0.54
CHEK2-210ENST00000416671 GLI2P10070 1586 aa18.45■□□□□ 0.54
CHEK2-210ENST00000416671 USP35Q9P2H5 1018 aa18.44■□□□□ 0.54
CHEK2-210ENST00000416671 SENP3-EIF4A1A0A087X0R7 540 aa18.43■□□□□ 0.54
CHEK2-210ENST00000416671 TRPM1Q7Z4N2 1603 aa18.43■□□□□ 0.54
CHEK2-210ENST00000416671 ARID4BQ4LE39 1312 aaPredicted RBP18.41■□□□□ 0.54
CHEK2-210ENST00000416671 NEFMP07197 916 aa18.41■□□□□ 0.54
CHEK2-210ENST00000416671 HECW2Q9P2P5 1572 aa18.4■□□□□ 0.54
CHEK2-210ENST00000416671 MLH3Q9UHC1 1453 aa18.4■□□□□ 0.54
CHEK2-210ENST00000416671 NPM2Q86SE8 214 aaKnown RBP18.39■□□□□ 0.54
CHEK2-210ENST00000416671 GGT6Q6P531 493 aa18.39■□□□□ 0.53
CHEK2-210ENST00000416671 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
CHEK2-210ENST00000416671 E9PCH4 1651 aa18.38■□□□□ 0.53
CHEK2-210ENST00000416671 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
CHEK2-210ENST00000416671 PPRC1Q5VV67 1664 aaKnown RBP18.38■□□□□ 0.53
CHEK2-210ENST00000416671 YEATS2Q9ULM3 1422 aa18.38■□□□□ 0.53
CHEK2-210ENST00000416671 LAS1LQ9Y4W2 734 aaKnown RBP18.37■□□□□ 0.53
CHEK2-210ENST00000416671 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
CHEK2-210ENST00000416671 ATP10AO60312 1499 aa18.37■□□□□ 0.53
CHEK2-210ENST00000416671 DEPDC5O75140 1603 aa18.36■□□□□ 0.53
CHEK2-210ENST00000416671 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms